Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g02530 ATGATAAACACGGGAGAAGGAAGTGACCATCAAGCTATGACAGATGATGGGAATGTTGAACATATTGGAGGAGGTGGAGTTAATAAGGCTGAAAATAACTCTATCTCTCATGTTGAGGTTGGGGCATCTGAGCCATATGTGGGTAGGGAGTTTGTTTCTGAAGATGCTGCAAAGACTTTCTATAGTGAGTATGCCAGACGAGTGGGTTTCAGCTGCAAAGCTGCACAGGGTCGTTCCAAAGCCGATGGGGAGAATATGTACTGTGAGTTTTTCTGTGGCAGGGAGGATTTGAAAAGAAAGCCTGCTGACAGTTGTAATGCAATGATTAGGATTGAGAAGAGGGACCAAAATAAGTGGGTTGTTACACAATTTGTAAAGGAACATAGCCATTCCATGGCAAGCCTTAGTAAGGTGCATAGTATTAGGCCTCGCAAGCACTTTTCTAGTGTGGGAAGAACTATGCCTGAAACTTACCAAGGAGTGGGGCTTGTTCCAAGCGGTGTGATGTATGTATCTATGGATAAGAATTGCATTCCCACTAAGAATATTCACGGGATTAGGAATATTCCCGCAGTTGCTACTATTGCTGAAACAGTTCACCCGGTTAAAAGTCCGTCAATGATGAATTATGCTGTTAGGCCACCTATTCAAAAGAGGACGTTAGGGAGGGATGCTCACAACCTGCTGGAGTACTTTAAGAAAATGCAAGCTGAGAACCCTGGTTTCTTCTATGCAATACAACTTGATGATGATAATCATATGTCTAATGTGTTTTGGGCAGATGCGAGATCAAGGACTGCTTATGGTCATTTTGGTGATACAGTTACTATGGACACAACTTACAGAATAAATCAATATAGAGTGCCCTTTGCTCTGTTCACCGGGGTAAACCATCACGGTCAGATGATTTTGTTTGGTTGTGCACTCCTCTTGGATGATTCTGAGGCTTCTTTTATCTGGCTCTTCAAGACATTTTTGACAGCAATGAATGACCGTTACCCTGTCTCTATCACTACTGATCAAGACAGAGCTATACAAACAGCAATTTCACAAATTTTTCCTCAAACACGGCACTGTATAAGCAAATGGCATGTCTTGCGAGAAGGCCATGAGAAGTTGGCCTATGTATGCAACATGCATCCAAATTTTCAGATTGAACTATATAATTGTATTAATCTGACAGAAACAGTTGAGGAGTTTGATTCATCGTGGAATTTTATCATGAATAAATATGATCTCACAAAAAATGATTGGCTTCAGTCATTGTACAATGCTCGTGCGCAATGGGTTCCAGCATATTTCCGTGATTCATTTTTTGCAGTAATATCTCCTAATCACGGAATTGATGGTTCTTTTTTTTATGGTTTTGCCAACCATCAGGCGACATTGCCAGTGTTCTTTAGGCAGTACGAACAAGCTTTAGAGAGCTGGTTTGAAAAAGAATTAGAAACAGATTATGAGACAATTTGCACCACCCCTGTCCCGAGGACACCTTCCCCAATGGAGAAGCAGGCTGCTAATCTCTATACTCGGAAAATATTTTCAAAGTTTCAAGAAGAGCTAGTGGAAACCTTTGCTTATACAGCCAACAGAATTGAAGAAGATGGAGAAAGTAGCATATTCAGGGTTGCAAAATTTGACGATGACCAAAAGGCTTATGTTGTCACGTTAAACCTCTCTGAGTTGAGAGCTAACTGTAGTTGCCAAATGTTTGAGTATTCAGGCATTCTATGTAGACATGTTCTAACTGTTTTTACTGTGACTAATGTACTTACATTGCCATCTCATTATATTTTAAAACGGTGGACAAAAAATGCAAAAATCAGTGCTGGGTCAGTTGAACATGCTAGTGAATCGCATGTACATGAGTCTTTGGCATCACGATATAGCAATCTTTGTTGGGAAGCCATCAAATATGCTGAAGAGGGGGCAATGACTGTGGAAACACATGATACTGCAATCGGTGCTCTTCGAGAAAGTGCAAAGAAGATTTCTTTCATGAAGAGAAGTGTTGCCAAAGTTTCCCCACCCAGTCATCCCGTCAGTGGGATTGCTTATGATGACAGAAAATCCCCTACTTCAACAGCAGATACAAACCCTCTTTTGTGGCCACAGCAGGATGAATTAACAAAGAGGTTTAATCTTAATGATGCTAGTACTCCTGTTCAATCAGTTGCTGATCTAAATTTACCACGAATGACCCCAATGTCTCTTCAGCGAGATGATGGTACACCTGAAAACATGGTGGTTTATCCCTGTCTGAAATCATTGACATGGGTAATGGAGAACAAGACCTCAACACCAGGGAATAGAGTGGCTGTTATCAATCTTAAGTTGCAAGATTATAGCCGGAATCCATCAACAGAATCGGAAGTTAAGTTTAATCTCTCGAAAGTTACTTTGGAACCGTTATTTAACCACATGGTCAACATCAGAGATCAACTTTCTGCACCAACTAGGAAGTTTGCTGTATTAAATTTAAAGCTTCCAGTTGCCGATACAAATACTGGTGTGTGTGAAGTCAAATTTCAGGTGTCCAAGGAAACATTAGTTGCTGTACTACGATCAATGGACTATATACGTGAGCAACTATCGGTTCCTGGCGATGCACAGCCAGAAGCTGCTATATCGAAAAGACCTCGGAAGTGA 2649 0.4096 MINTGEGSDHQAMTDDGNVEHIGGGGVNKAENNSISHVEVGASEPYVGREFVSEDAAKTFYSEYARRVGFSCKAAQGRSKADGENMYCEFFCGREDLKRKPADSCNAMIRIEKRDQNKWVVTQFVKEHSHSMASLSKVHSIRPRKHFSSVGRTMPETYQGVGLVPSGVMYVSMDKNCIPTKNIHGIRNIPAVATIAETVHPVKSPSMMNYAVRPPIQKRTLGRDAHNLLEYFKKMQAENPGFFYAIQLDDDNHMSNVFWADARSRTAYGHFGDTVTMDTTYRINQYRVPFALFTGVNHHGQMILFGCALLLDDSEASFIWLFKTFLTAMNDRYPVSITTDQDRAIQTAISQIFPQTRHCISKWHVLREGHEKLAYVCNMHPNFQIELYNCINLTETVEEFDSSWNFIMNKYDLTKNDWLQSLYNARAQWVPAYFRDSFFAVISPNHGIDGSFFYGFANHQATLPVFFRQYEQALESWFEKELETDYETICTTPVPRTPSPMEKQAANLYTRKIFSKFQEELVETFAYTANRIEEDGESSIFRVAKFDDDQKAYVVTLNLSELRANCSCQMFEYSGILCRHVLTVFTVTNVLTLPSHYILKRWTKNAKISAGSVEHASESHVHESLASRYSNLCWEAIKYAEEGAMTVETHDTAIGALRESAKKISFMKRSVAKVSPPSHPVSGIAYDDRKSPTSTADTNPLLWPQQDELTKRFNLNDASTPVQSVADLNLPRMTPMSLQRDDGTPENMVVYPCLKSLTWVMENKTSTPGNRVAVINLKLQDYSRNPSTESEVKFNLSKVTLEPLFNHMVNIRDQLSAPTRKFAVLNLKLPVADTNTGVCEVKFQVSKETLVAVLRSMDYIREQLSVPGDAQPEAAISKRPRK 882
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g02530 882 Pfam MULE transposase domain 275 366 IPR018289 -
Viun8g02530 882 MobiDBLite consensus disorder prediction 678 700 - -
Viun8g02530 882 SMART 26again6 564 591 IPR006564 GO:0008270
Viun8g02530 882 Pfam SWIM zinc finger 553 587 IPR007527 GO:0008270
Viun8g02530 882 Pfam FAR1 DNA-binding domain 59 132 IPR004330 -
Viun8g02530 882 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 28 665 IPR031052 GO:0006355
Viun8g02530 882 Coils Coil 881 882 - -
Viun8g02530 882 MobiDBLite consensus disorder prediction 1 30 - -
Viun8g02530 882 ProSiteProfiles Zinc finger SWIM-type profile. 553 589 IPR007527 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g02530 Viun-Chr8 34749228 34754604 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Viun8g02530 MULE 4.1e-24 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g02530 - - gmx:100807296 1531.54