Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Viun8g02472 | ATGATGTTCACAAAGCTTGTAACATTTCAGTTTATTCTCATCACCTTTTTCTTCTCACTTTTAAGGTTCTCTTCCTCGGAAGTTTCTGGTGTTTCTTTATCCAACGGTACTGTTATGTTTGGCCATGAAGCTGTCGAAGATAAAAACATTGAAGCAAGTGCTCTATTGAAGTGGAAAGCCAGCCTTGATAACCAAAGCCAGGTTTCCTTGTCTTCTTGGTCTACTTTCACTAGCCCTTGCAAGTGGAAGGGCATAGTTTGTGATGAATCCAACTCTATCAGCACTATAAATCTTGTAAACTTTGGACTAAAAGGTACACTTCTCAATCTAAACTTCTCATCCTTTCCTAAGCTTCTGAGGTTTCATGTAAGTTACAACAACCTCGGTGGACCTATTCCTCGTCAACTTGGTAACATGTCCAAACTTTCTGAGTTGAGAATGGATCATAATTACTTTAGTGATTCCATCCCCCAAGAAATAGGGACACTGCATAACTTGGAGTATCTGTTCTTGAGAGCAAATCAACTTTCTGGTTCCATCCCCCTCACAATTGGAATGTTGACAAATCTTGTTACACTTGATTTATCATCCAACCATCTCTCTGGTACAATCCCTTCACTAAGAAACTTGACAAATTTACAAGAACTTATCCTCTTCAACAACCTTCTCTCTGGTCCTATCCCTGAGCATTTGGGAGGACTTCATCATCTCACAACAATCAAATTGTTAAAAAATCATATTTCTGGGCTAATCCCTTCTTCCATAGGAGACCTGGCTAATTTGATGAAACTTCAGCTCACTCGTAATCAACTACAGGGGTCAATTCCTTCCTCTCTTGGAAACTTGACAAAGCTCATTGAATTGTCCATGTCTGAAAACATGCTTTCTGGTTCAATTCCTGCTTCCATAGGAAACTTGGTCAATCTAGAAAAGCTTAACCTTGCACAAAACAAACTTTCTGGACCTATTCCCTCTATCTTCAGAAATTTGACTAAGCTTACCTTCCTATTACTTCATGTGAACAAACTTACCGGAAATTTCTCAGCAGCAACAAGTAACCTTACCAATTTAGTAAATTTACAACTAAGCTCTAATCATTTCACTGGCCCTTTGCCACAATATATTTGCCTTGGAGGGTCACTTTTATGTTTTGCAGCCAATGAAAATCGTTTCACTGGCCCAATTCCATCAAGTTTGAAGAACTGCTCTAGTCTTGAAAGGCTCAACCTTGCAGAAAATATGTTGATGGGAAACATTAATGATTTTGGTATGTATCCAAATTTGGAGTACATTGATCTGAGTAGAAATGCCTTCAACGGTCACCTTTCATCAAATTGGGTCAAATGTCATAATCTCATAGGCCTGTTTATCTCATACAACAGATTATTCGGTGGTATACCCCCAGAGTTAGGCCAGGCACCTAAATTACAAAGGCTTAAACTTTCTTCAAACAGCCTAACGGGAAAGATTCCAAAAGAACTTGGGAACTTGACCCAGTTGTTTGAACTCTCCATAAGTAACAACAATCTTTCAGGCAACATTCCCTTCGAAATTGGTTCCTTAAAGCAACTTCGGATCTTTGATCTTTCAACAAATGTTTTAAGTGGTCCAATCCCAAAACAGCTCGGAAGGTTGCTCAAGTTAAATCACTTGAACTTAAGCCATAACAAATTAAATGAAAGCATTCCGTCTGAATTTAGCCAACTGCAACATCTTCGAGAACTTGATCTTAGTTGGAATTTGTTGAATGGAAAAATTCCAGCAACACTTCGAAAATTGAAGATGTTGGAAAACTTGAACCTCTCCCACAACAATCTCAGCGGAAACATTTCCTCAAGTTTTAAGGATATGCTCAGTTTGACAAACGTTGACATATCTAATAACCAATTAGAGGGTCCAATTCCTAACAATCGAGCCTTCCTTAAGGCTCCATTTCAAGCATTGCAGAACAACAAAAACTTGTGTGGCTATGCTTCTGGGCTGATGCCTTGCCCGCAGTTGTTGAGTCACAATCCTCATCGTAAGAAGATCAAGATGTTACTCTTCCTTACTTTGGGTGCATTATTTGTTGTTGGAGTTTCACTATACATTCATTGGCAAAAAGCAAGAAAAATCAAAAAGCAAGAGAGAGAAGAAAAAAATGGAGATCTTTTTTCTATATTGCATTATGATGGGAAAATAGTGCATGAAACAATCATCGAAGCAACGAATAATTTCGATGAAAGATATCTCATCGGAAAAGGAGGGTTTGGAGGTGTTTACAAGGCCATCTTACCCTCTGGCCAGATTGTTGCTGTGAAGAAACTTCAGGTTGAAGTTGACAGTGAAATGGTTGATTTTAAGGCTTTTACATCTGAAGTTCGAACCCTGACAGAAATCAAACATCGTAACATTGTGAAGTTGCATGGGTTTTGTGAACATCCACGCTATCGTTTCTTGGTTTATGAGTTCGTAGAAGGTGGCAGCTTGGACAAAGTACTAAACAACGACACACATGCATCAATGTTTGACTGGAATAAGAGGGTTAACGTTGTTAAAGGTGTGGCAAATGCTTTGTATCATATGCACCATGGTTGCTCTCCTTCTATTGTTCATCGTGACATATCAAGCAAGAATGTTCTCATAGATTTGGAATATGAAGCTCGCTTATCTGACTTTGGAACAGCAAAGATTCTTAATCCTAATTCACGTAATTTAACTTCGTTTGCAGGCACTTATGGATATGCTGCACCAGAGCTTGCTTATACAATGGAAGTGAATGAGAAATGTGATGTGTTCAGTTTTGGGGTGCTTTGTTTGGAAATAATAATCGGAAATCACCCAGGAGATTTGATTTCTTCGATGCATTCACCATCTTCAACATCAGTAACAGCTAATTTGCTATTGAAGGATGTGATGGACCAACGATTACCTTTTCCAGTGATGCCAGTTGTTAAGGAGGTGGTAATCATTGCAAAAGTGGCATTTGCTTGTTTGAATGAAAGACCACTTTCTCGTCCAACCATGGAAGATGTTTATAACAAGTTTGTGATGCCTAAGTCACCTTTAACGAGGGATACACTCAACACCATTGTTCTTGGACAACTTCAAAATTATTGA | 3099 | 0.3869 | MMFTKLVTFQFILITFFFSLLRFSSSEVSGVSLSNGTVMFGHEAVEDKNIEASALLKWKASLDNQSQVSLSSWSTFTSPCKWKGIVCDESNSISTINLVNFGLKGTLLNLNFSSFPKLLRFHVSYNNLGGPIPRQLGNMSKLSELRMDHNYFSDSIPQEIGTLHNLEYLFLRANQLSGSIPLTIGMLTNLVTLDLSSNHLSGTIPSLRNLTNLQELILFNNLLSGPIPEHLGGLHHLTTIKLLKNHISGLIPSSIGDLANLMKLQLTRNQLQGSIPSSLGNLTKLIELSMSENMLSGSIPASIGNLVNLEKLNLAQNKLSGPIPSIFRNLTKLTFLLLHVNKLTGNFSAATSNLTNLVNLQLSSNHFTGPLPQYICLGGSLLCFAANENRFTGPIPSSLKNCSSLERLNLAENMLMGNINDFGMYPNLEYIDLSRNAFNGHLSSNWVKCHNLIGLFISYNRLFGGIPPELGQAPKLQRLKLSSNSLTGKIPKELGNLTQLFELSISNNNLSGNIPFEIGSLKQLRIFDLSTNVLSGPIPKQLGRLLKLNHLNLSHNKLNESIPSEFSQLQHLRELDLSWNLLNGKIPATLRKLKMLENLNLSHNNLSGNISSSFKDMLSLTNVDISNNQLEGPIPNNRAFLKAPFQALQNNKNLCGYASGLMPCPQLLSHNPHRKKIKMLLFLTLGALFVVGVSLYIHWQKARKIKKQEREEKNGDLFSILHYDGKIVHETIIEATNNFDERYLIGKGGFGGVYKAILPSGQIVAVKKLQVEVDSEMVDFKAFTSEVRTLTEIKHRNIVKLHGFCEHPRYRFLVYEFVEGGSLDKVLNNDTHASMFDWNKRVNVVKGVANALYHMHHGCSPSIVHRDISSKNVLIDLEYEARLSDFGTAKILNPNSRNLTSFAGTYGYAAPELAYTMEVNEKCDVFSFGVLCLEIIIGNHPGDLISSMHSPSSTSVTANLLLKDVMDQRLPFPVMPVVKEVVIIAKVAFACLNERPLSRPTMEDVYNKFVMPKSPLTRDTLNTIVLGQLQNY | 1032 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Viun8g02472 | 1032 | Gene3D | Ribonuclease Inhibitor | 382 | 666 | IPR032675 | - | |
Viun8g02472 | 1032 | FunFam | Nuclear pore complex protein NUP107 | 48 | 206 | - | - | |
Viun8g02472 | 1032 | FunFam | Leucine-rich repeat receptor protein kinase MSP1 | 701 | 817 | - | - | |
Viun8g02472 | 1032 | Pfam | Leucine Rich Repeat | 596 | 615 | IPR001611 | GO:0005515 | |
Viun8g02472 | 1032 | SUPERFAMILY | L domain-like | 59 | 375 | - | - | |
Viun8g02472 | 1032 | SUPERFAMILY | RNI-like | 348 | 640 | - | - | |
Viun8g02472 | 1032 | ProSitePatterns | Tyrosine protein kinases specific active-site signature. | 863 | 875 | IPR008266 | GO:0004672|GO:0006468 | |
Viun8g02472 | 1032 | Gene3D | Phosphorylase Kinase; domain 1 | 699 | 817 | - | - | |
Viun8g02472 | 1032 | PANTHER | LEUCINE RICH REPEAT KINASE 2 | 280 | 1015 | - | - | |
Viun8g02472 | 1032 | Pfam | Leucine rich repeat | 455 | 510 | IPR001611 | GO:0005515 | |
Viun8g02472 | 1032 | Pfam | Leucine rich repeat | 260 | 319 | IPR001611 | GO:0005515 | |
Viun8g02472 | 1032 | Pfam | Leucine rich repeat | 523 | 582 | IPR001611 | GO:0005515 | |
Viun8g02472 | 1032 | FunFam | Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 | 354 | 668 | - | - | |
Viun8g02472 | 1032 | SUPERFAMILY | Protein kinase-like (PK-like) | 726 | 1008 | IPR011009 | - | |
Viun8g02472 | 1032 | Pfam | Protein kinase domain | 743 | 1008 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Viun8g02472 | 1032 | ProSitePatterns | Protein kinases ATP-binding region signature. | 745 | 768 | IPR017441 | GO:0005524 | |
Viun8g02472 | 1032 | Gene3D | Ribonuclease Inhibitor | 302 | 381 | IPR032675 | - | |
Viun8g02472 | 1032 | Pfam | Leucine rich repeat N-terminal domain | 51 | 88 | IPR013210 | - | |
Viun8g02472 | 1032 | FunFam | Leucine-rich repeat receptor protein kinase EMS1 | 251 | 350 | - | - | |
Viun8g02472 | 1032 | SMART | LRR_typ_2 | 545 | 568 | IPR003591 | - | |
Viun8g02472 | 1032 | SMART | LRR_typ_2 | 497 | 521 | IPR003591 | - | |
Viun8g02472 | 1032 | SMART | LRR_typ_2 | 593 | 616 | IPR003591 | - | |
Viun8g02472 | 1032 | SMART | LRR_typ_2 | 569 | 592 | IPR003591 | - | |
Viun8g02472 | 1032 | SMART | LRR_typ_2 | 306 | 329 | IPR003591 | - | |
Viun8g02472 | 1032 | SMART | LRR_typ_2 | 354 | 378 | IPR003591 | - | |
Viun8g02472 | 1032 | SMART | LRR_typ_2 | 210 | 234 | IPR003591 | - | |
Viun8g02472 | 1032 | SMART | LRR_typ_2 | 139 | 163 | IPR003591 | - | |
Viun8g02472 | 1032 | SMART | LRR_typ_2 | 258 | 282 | IPR003591 | - | |
Viun8g02472 | 1032 | SMART | LRR_typ_2 | 187 | 209 | IPR003591 | - | |
Viun8g02472 | 1032 | ProSiteProfiles | Leucine-rich repeat profile. | 189 | 211 | IPR001611 | GO:0005515 | |
Viun8g02472 | 1032 | ProSiteProfiles | Leucine-rich repeat profile. | 547 | 569 | IPR001611 | GO:0005515 | |
Viun8g02472 | 1032 | FunFam | MDIS1-interacting receptor like kinase 2 | 818 | 1015 | - | - | |
Viun8g02472 | 1032 | ProSiteProfiles | Protein kinase domain profile. | 739 | 1010 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Viun8g02472 | 1032 | Gene3D | Transferase(Phosphotransferase) domain 1 | 818 | 1018 | - | - | |
Viun8g02472 | 1032 | Gene3D | Ribonuclease Inhibitor | 48 | 206 | IPR032675 | - | |
Viun8g02472 | 1032 | Gene3D | Ribonuclease Inhibitor | 207 | 301 | IPR032675 | - | |
Viun8g02472 | 1032 | PRINTS | Leucine-rich repeat signature | 593 | 606 | - | - | |
Viun8g02472 | 1032 | PRINTS | Leucine-rich repeat signature | 190 | 203 | - | - | |
Viun8g02472 | 1032 | SMART | LRR_sd22_2 | 163 | 184 | - | - | |
Viun8g02472 | 1032 | SMART | LRR_sd22_2 | 569 | 601 | - | - | |
Viun8g02472 | 1032 | SMART | LRR_sd22_2 | 187 | 212 | - | - | |
Viun8g02472 | 1032 | SMART | LRR_sd22_2 | 306 | 332 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Viun8g02472 | Viun-Chr8 | 34408027 | 34411542 | Dispersed/Proximal |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Viun8g02472 | 44 | 911 | Receptor kinase-like Gene Family | AT4G08850 | 44.884 | 0.0 | 719 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-XI-1 | Viun8g02472 | Pkinase | 1.3e-47 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Viun8g02472 | - | - | gmx:100800924 | 1460.28 |