Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g02466 ATGTTACGTGGAGAATCTTCCTCAAGTTCTCCTGATGCATCTTCGCGGTGGAGCTACCATGTTTATTTGAGTTTTGGAATGGAAGGCACTCACGTAGATTTTGCTAACACCTTATGCGCTTCGTTGCAGCGAAAGGGAATCTCAACTTTCACATATGATAATCAAGTTGAGAGAGATGTGATGTTGAAAAGAGTTCAGAAAGCAATGGAGGAGTACCTTGTTGCCATTGTCCTTCTCTCCGAAAACTATGCTTCTTCCACTTGGTGTTTGGATGAACTCCAAAAGATTCTTGCTGTGGGAAAACCAGTTATTCCTGTGTTTTATGAAGTCGCTCCTTCCGATGTTAGGTACCAGATAAATTGTTTCGCTAAGGCTTTCGAAGAACATAAAAGATCAGAAGAAGACCAATCGAAGGTGCAACAATGGAGGGAATCCTTGAAAGAAGTTGCGGACTTTTCTGGCTGGGAGTCCAAGGATAGGAGAAGGGAAGAGCTCATTGAAGACATTATTAAATCGGTATGGACAAAAATACGTCATAAATTACCATCATACGAGGAGGAATGGGTTGGAATTGATTCAAGAGTTGAGAAAATAAGTTCACTTTTGAAACTGGAATTGAAAGACATGGTTCGCTTCATTGGAATATGGGGCATGGGTGGTATAGGAAAGACAACTCTAGCGAGAGTTGTATTTAAGAAAATATGTAGCCAATTTGATATTAGTTGCTTCCTTGAAAATGTAAGGGAGATTTCTGGGAAAACTCATGACATGCTTACCTTACAAATAACACTTCTTTCTCATATGGAAGTGAAAGAATTCACAATTCAAAATTTGGATGAAGGAAAGATCGTAATAGGAGGTATCTTACGCAACAACAGAGTTCTCCTGGTTCTTGATGATGTTGATGACGCAAGACAATTGGACAGTTTGGGTGTGAATGATCAAGGGAAGTTTGGCCCTGGGAGCAGGATTATAGTAACAACAAGAGACATGGAAGTACTAAAACCACATGGAAAATTTGAAATTTGTAAAATTGGTCTGTTAAATTCTGATGAGTCCCTTCAACTTTTTTGTCAAAAAGCTTTTAGAATAGAGAAACCATCAGAACAACTATTGCAGTTGTCAAAAGTGGCTGTTCAACAAGCTGGAGGCCTTCCTCTGGCTCTTGAGATTATGGGTTCATCCTTCTGTGGGAGAAATGAATCCCAGTGGAAAGAATTTTTGGGTAAGAAAGAATACTCAAAGAAAGATATTGTGATGGAGAAACTTATAATAAGCTATCATGGGTTACCAGAAAGTTATCAGATTTTGTTTCTTGATATTGCATGTTTCTTCAACGGGTGGGTGAAAGAGCACGTGGAACAAATTCTAACAATTTGTTGCCGTTGTCCCGCAAATGGAATTGATGTTCTAATTGATAAATCACTGGCAACTTGTGATGGATCACGTTTAGGGATGCATGATTTACTTCAAGAAATGGGAAGAAAAATTGTTGTTGAAAAATGTCTGATAGATGCTGGCAAACGCAGCAGGTTGTGGTCACCCCATGACATTGATCAAGCACTAAAAAGAAAGAAGAAAAAAGAATCGATTGAAGGTATAGTTTTGAAGTCGTCCACTGAGCCATACATTGCAAATTGGGATCCCGAAGCCTTCTCAAAGATGTACAATCTCAAATTCCTTATAATTAATTTTCACAATATACAATTTCCCCGTGGCCTCAAATGTCTTAGCAGTTCACTGAAAGTTCTTCGGTGGACAAAGTGTACTTTGGAAGCTCTGCCGCTTGGCGTGAAGCTAGAGAACCTTGTGATGTTAAAAATGCGTTACAGCAAAATAAAGAAGATCTGGAGTGATTCTCAACATTTCAGAAGGTTGAAGTTCATTGATCTGAGCCATTCCGAAGATCTAATTGAAACTCCAATAGTTTCTGAGGTTCCATGTCTTGAAAGTTTGCTTCTTGAAGGTTGTAAAAACCTTGTCAAGGTTCACCAATCTGTTGGACTGCACACGAAGCTTGTTGTGTTGAACTTGAAAGATTGCATAAACCTTCAAATCCTTCCAACAAAGTTCAAAATGGATTCTTTGGAGGAATTGATTCTTTCTGGCTGCTCAAAACTTAGAAAGCGCACCAAGTTTGGAAAGAATGTGCAGTGTTTATCACTGCTTAATCTGCATAAATCAGAAAATCTTATCTGCCAACCAAAGTCTGTTTGCAATGTCAGTGGGACGAAAGTTCATTCAGAAAACCTTAAAGAGCTTTCTTTTTGTGGAGGAAAAGAACTAACATCCAAATCAACATGGAACTTACATCAATGGAGCTCAATATGTGGGAAGAAACTAGTTTCCAAGGAATTAAACTTGCCTCCTCTTTCTAGTTTATCAAGCTTGAAGTTCTTGAATTTAAGTTACTGTGACCTTAATGATGAATCAATTCCAGATGATCTTGGATCACTATCATCTTTGTTGGGGTTAGATCTAAGTGGGAACAATTTTGTTAGGCCTAATTACTGCATTAGCAATCTTCATGCCCTGAAGAGTTTGACCTTAATTGATTGCCCAAGGCTTGAGTCTTTGCCAATGCTCCCACCAAATGTTCAATGTCTGTGTACAGCTAACAGTACTGAAATGAAACCCTTGAATTCAGATGCACATTTGCTATGGAAGATCTTTGAGCTGCACATGAATCAGGTATATTCATTATATACACCTTATTCTCTCCCTCATCTGCCTCCTATCCACCCTAATTATTTCCATAAAGTTTGTGTTTACCAAATGGAAGGTAGACCACATTTTATGTTCATCATTCCGGGGAGAGAAATTCAAAAATGGAATGAAGAGTGCTTTCTGGTTGATCCATCACATCATCCATATAACATGTTGGGTTGTGTTTCAGCTGCATCAATAATAGTGGAAGCACCTAAATACTGTGAGTCTAGTGGATGGTTAGGAATTGCAATATGCTTAGCATTAGAACCTTCAAATATGCAGGCTTCTCCTCAATCACATGTGAGTCCACATTCCATGGGAAATGAGGAAATTTGCATTTATTATTGGGCATGTAAAGCTCATAGTGGTGAACCTGACTTGATTTTCCCCATAGTACCTAAACATAGCCACTCAGTTCATGAATGCAATGAAGAAAAATGCCTTCTTCAACTGATATTTTATGTGGAGAATCATTCCAAGGCATGGAAGCCAAGTATAAGGAAGTGTAGGTGTAGTGTTATATTTAAGGAAGATGTTGAAGAATGGTGCTGTCCGAGGGTGCATACCAAGGCTTCAATGTTAAGTGGAGAATCTTCCTCAAACTCTTCGAGATGGACATACCATGTTTTTTTGAGTTTTCGTGGAGAAGACACACGCCTAGGTTTTACAGATCACTTGTACGCTGCCTTGGTGAGAAAGGGAATGATAACTTTCCGAGATGACAAGAATCTAGAGAAAGGAGATAAGATAGATAAAGAACTATTTAAAGCAATTAAAGAGTCCCTCGGGGCCATTGTGATTCTCTCTGAGAACTATGCCTCTTCCTCTTGGTGTTTGGATGAGCTCAACAAAATTCTGGAATCAAATAGAGTTCTGGGGAGAGAAGTTTTCCCAGTTTTCTGTGGGGTTAGTCCCAGTGAGGTTCAACACCAGACAACAACGAGTTTTGAAGAGGCTTTTCAGAAACATGAAAGAAGATTTGAGAAAGACACAGAAAAGGTGCGACAATGGAGAGATTCCTTGAAGGAGGTTAGCCAAATTCCTGGCTGGGAGTCCAAAAATTACCAGCATCAAACAGAGCTCATTGAAAACATTGTTGAATCAGTATGGACAAAGCTACGTCCCAAAATGCCATCTTTCAATGATGGGCTAGTTGGAATTGGCTCAAGAGTTAAGAAAATGGACTCACTGTTAAGCATGGAATCGAAGGATCACGCTCGCTTTATCGGAATATGGGGCATGGGTGGCATTGGAAAGACAACCCTGGCGAGAGTTGTCGTCAAGAAAATCCAGCATCAGTTTGATATTAGTTGCTTCCTTGACAACGTTAGAGAGATTTCAAAAGAAAGTGATGGCAGGATTCGTTTACAAGGAAAACTTCTTTCTCATTTGGCTATAAAAGGCTTAGAAATTAGAGATTTAGACGAGGGAAAGAACACAATAAGAGAACTTCTATTCAAGAAGAAAGTTCTTCTTGTCATTGATGATGTTGATGATACAAGCCAACTAGAGTGTTTGGCTGAGAGGTTAGAGTGGTTTGGCCCAGGGAGCAGAGTTATAATAACAACAAGAGACACACAAGTCCTAATATCACATGGCATAATTGAAAACTACAAAATTAACCTCTTAAATTCAGACGAATCCCTTCAACTCTTGAGCCAGAAAGCCTTCAAAAGAGATAAACCTGAAGAACATTATTTGGAGTTGTCAAAAGCTGTTGCCAAATATGCAGGAGGCCTCCCTTTAGCCTTGGAGCTGTTAGGTTCATTTCTGTGTGGAAGAAGGGAATCCCAATGGAAAGAAGTAGTTGATATGATAAGAGAAGTGCCCCCGAGTCATATTGCGATGCAATCGCTTAGAATAAGCTACAATGGGTTGCCCCTGCCTTATAAAACTTTGTTTCTTGATATTGCATGTTTCTTCAGAGGGAGGATAAAAGAGCTTGTGATACAAGCTTTAGAAATTTGTGAGCGTTATCCACCAGTTGGAATTGACCTTCTGGTTGAAAAATCACTGGCAACTTATGATGGCTTTACTATAGGGATGCATGATTTGCTTCAAGAATCAGCAAGGGAAATTGTTACAGAAGAAAGTTATGTGGATCCGGCAAAACGAAGTAGGTTGTGGACACTAGAGGACACAAATGAAGTATTAAAATACAATAAGGCAAATGAATCAATTGAAGGTATTGTTTTGAACTCGCCTGAAAAGGAAGAAGCTATTTGGGATCCTGAAGCGTTCTCAAGGATGTATAATCTTCAATTACTAATCATAAACTATCATGTAAATCTTCCCACTAGCCTCAAATGTCTTTGCAGTTCACTGAAATTTCTTCAGTGGATGAAGTATCCTTTGGAATCTCTGCCGCTTGGCGTGCAGCTAGATGAACTTGTAGAGTTGAAAATGCACTCCAGCAGAATAAAAAGGATTTGGAATGGAAATCAAGATTTTGCAAAGCTGAAGTTCATTGATTTGAGCTATTCTGAAGATCTAATTCAAACCCCAATAGTTTCTGGGGCTCCATCTCTTGAAAGATTGCTTCTTATAGGTTGTGTAAACCTTGTTGAGGTTCACCCATCAGTTGGACAACACAAGAGACTTGATCTATTGATGCTGAAAGATTGCAAGAATCTTCAAATCATGCCAAGAAAACTGGAAATGGATTCTTTGGAGGAATTGATTCTCTCTGGCTGCTCAAAACTTGAAAAACTCCCAGAATTTGGAGAGAACATGAAATCTTTATCACTGCTTAATGTGGAGCATTGCATAAATCTCCTTTGCCTGCCAAATTCCATTTGCAATTTGAAATCTCTTAGAAAACTCTACGTTTCTGGCTGCTCAAGAATCTCAACACTGCCAGATGGTATGAATGAAAATGAGTCTTTGGAGGAACTTGATGTGAGTAGAACTGAGATAACAGAAATTTCTTCATCTAAAGTTCGTTTAGAAATACTTAGAGAGCTCTCCTTTGGTGGAAGGAAAGAAACAACACCCAAATCACAAAACTTACTTCAATGGATCTCGAAGTTTATGGGACAATCAGATATGCATGAGTCAATCGTGCCTCCTCTTTCCAGTTTATTGGCTTTGGAATCCTTGGATTTAAGTTATAGAGATCTTACTGATGAATCAATTCCTAGTGATTTTGGTCCTTTGTCATTGTTGAAGCGTTTAGATCTGAGTGGTAACAATTTTGTTAACCCACCTGCCCAATGCATTATTAGTCTTTCTATGTTGCATACTTTGTCCTTCGATCATTGCCCAAGACTAGAATCCTTGCCAATGCTTCCACCAAATTTACAAGCTTTGTACGCAACTAATTGTCCTAAATTGAAACCCTTTCACTTGGATGAAGATACTCTATGGAAGATCTTTGAGTCACATTCACATGAGGATCCGATTGAAGGGCCAGAACTTTGGTTCATAATACCAGGGAATGAAATTCCATCTTGGTTCAACAATCAAAACTCTCTTGCAATTGATTCATCAGATCAAACATATCAGAAGTTGTGCTGTGATTCAGTTACTTCAATAATAGTGGATGTACCTGAGGACTGCCAGTTAAGTGAATGGTGGGGAATTGCAGTGTGCCTTGTGTTAGAACCTTTAAACACGGATGTGCCATCTTCATCAAATGCAAGACCAACTTCTACTGTCAATGAGGAAATTGGCATTTATTACTGGGTCTGTAAAACTCCTGATAAAGATCCTGACCCAAATTTTCCTATAGCACCCAAGTTTGGTAACTTGCTGTATAAATTCAATGACCCTTACATCCATATTATATTCTTCAATGCTGATCATGTGTATATTCAGCATTATCTAAGTGGGGAGCAAACACAACTTGAAGTGGTCTTTTTTGTTGAAAATCTTTCTGAATCATGCAAGGCAAGAATAAAGAAGTGTGGGTGCCGTGTGATTTGTAAGGAGAAAATTGAAGAATGGAGGAAGCACTCAGATGGTCTTAATATATCAAGAATAACAGAAACGAATGAAGATGAGGAACGACATGAATTGGAGGTGGAAGAACCTACTTCTCCAACCCTTGGTAAATGA 6765 0.3891 MLRGESSSSSPDASSRWSYHVYLSFGMEGTHVDFANTLCASLQRKGISTFTYDNQVERDVMLKRVQKAMEEYLVAIVLLSENYASSTWCLDELQKILAVGKPVIPVFYEVAPSDVRYQINCFAKAFEEHKRSEEDQSKVQQWRESLKEVADFSGWESKDRRREELIEDIIKSVWTKIRHKLPSYEEEWVGIDSRVEKISSLLKLELKDMVRFIGIWGMGGIGKTTLARVVFKKICSQFDISCFLENVREISGKTHDMLTLQITLLSHMEVKEFTIQNLDEGKIVIGGILRNNRVLLVLDDVDDARQLDSLGVNDQGKFGPGSRIIVTTRDMEVLKPHGKFEICKIGLLNSDESLQLFCQKAFRIEKPSEQLLQLSKVAVQQAGGLPLALEIMGSSFCGRNESQWKEFLGKKEYSKKDIVMEKLIISYHGLPESYQILFLDIACFFNGWVKEHVEQILTICCRCPANGIDVLIDKSLATCDGSRLGMHDLLQEMGRKIVVEKCLIDAGKRSRLWSPHDIDQALKRKKKKESIEGIVLKSSTEPYIANWDPEAFSKMYNLKFLIINFHNIQFPRGLKCLSSSLKVLRWTKCTLEALPLGVKLENLVMLKMRYSKIKKIWSDSQHFRRLKFIDLSHSEDLIETPIVSEVPCLESLLLEGCKNLVKVHQSVGLHTKLVVLNLKDCINLQILPTKFKMDSLEELILSGCSKLRKRTKFGKNVQCLSLLNLHKSENLICQPKSVCNVSGTKVHSENLKELSFCGGKELTSKSTWNLHQWSSICGKKLVSKELNLPPLSSLSSLKFLNLSYCDLNDESIPDDLGSLSSLLGLDLSGNNFVRPNYCISNLHALKSLTLIDCPRLESLPMLPPNVQCLCTANSTEMKPLNSDAHLLWKIFELHMNQVYSLYTPYSLPHLPPIHPNYFHKVCVYQMEGRPHFMFIIPGREIQKWNEECFLVDPSHHPYNMLGCVSAASIIVEAPKYCESSGWLGIAICLALEPSNMQASPQSHVSPHSMGNEEICIYYWACKAHSGEPDLIFPIVPKHSHSVHECNEEKCLLQLIFYVENHSKAWKPSIRKCRCSVIFKEDVEEWCCPRVHTKASMLSGESSSNSSRWTYHVFLSFRGEDTRLGFTDHLYAALVRKGMITFRDDKNLEKGDKIDKELFKAIKESLGAIVILSENYASSSWCLDELNKILESNRVLGREVFPVFCGVSPSEVQHQTTTSFEEAFQKHERRFEKDTEKVRQWRDSLKEVSQIPGWESKNYQHQTELIENIVESVWTKLRPKMPSFNDGLVGIGSRVKKMDSLLSMESKDHARFIGIWGMGGIGKTTLARVVVKKIQHQFDISCFLDNVREISKESDGRIRLQGKLLSHLAIKGLEIRDLDEGKNTIRELLFKKKVLLVIDDVDDTSQLECLAERLEWFGPGSRVIITTRDTQVLISHGIIENYKINLLNSDESLQLLSQKAFKRDKPEEHYLELSKAVAKYAGGLPLALELLGSFLCGRRESQWKEVVDMIREVPPSHIAMQSLRISYNGLPLPYKTLFLDIACFFRGRIKELVIQALEICERYPPVGIDLLVEKSLATYDGFTIGMHDLLQESAREIVTEESYVDPAKRSRLWTLEDTNEVLKYNKANESIEGIVLNSPEKEEAIWDPEAFSRMYNLQLLIINYHVNLPTSLKCLCSSLKFLQWMKYPLESLPLGVQLDELVELKMHSSRIKRIWNGNQDFAKLKFIDLSYSEDLIQTPIVSGAPSLERLLLIGCVNLVEVHPSVGQHKRLDLLMLKDCKNLQIMPRKLEMDSLEELILSGCSKLEKLPEFGENMKSLSLLNVEHCINLLCLPNSICNLKSLRKLYVSGCSRISTLPDGMNENESLEELDVSRTEITEISSSKVRLEILRELSFGGRKETTPKSQNLLQWISKFMGQSDMHESIVPPLSSLLALESLDLSYRDLTDESIPSDFGPLSLLKRLDLSGNNFVNPPAQCIISLSMLHTLSFDHCPRLESLPMLPPNLQALYATNCPKLKPFHLDEDTLWKIFESHSHEDPIEGPELWFIIPGNEIPSWFNNQNSLAIDSSDQTYQKLCCDSVTSIIVDVPEDCQLSEWWGIAVCLVLEPLNTDVPSSSNARPTSTVNEEIGIYYWVCKTPDKDPDPNFPIAPKFGNLLYKFNDPYIHIIFFNADHVYIQHYLSGEQTQLEVVFFVENLSESCKARIKKCGCRVICKEKIEEWRKHSDGLNISRITETNEDEERHELEVEEPTSPTLGK 2254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g02466 2254 PRINTS Disease resistance protein signature 1387 1401 - -
Viun8g02466 2254 PRINTS Disease resistance protein signature 1311 1326 - -
Viun8g02466 2254 PRINTS Disease resistance protein signature 1480 1494 - -
Viun8g02466 2254 PRINTS Disease resistance protein signature 1788 1804 - -
Viun8g02466 2254 Gene3D Ribonuclease Inhibitor 1642 1789 IPR032675 -
Viun8g02466 2254 Gene3D Ribonuclease Inhibitor 543 714 IPR032675 -
Viun8g02466 2254 Gene3D Ribonuclease Inhibitor 715 885 IPR032675 -
Viun8g02466 2254 Gene3D Ribonuclease Inhibitor 1790 1861 IPR032675 -
Viun8g02466 2254 ProSiteProfiles TIR domain profile. 1108 1276 IPR000157 GO:0007165
Viun8g02466 2254 SUPERFAMILY L domain-like 1585 2027 - -
Viun8g02466 2254 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 177 441 IPR027417 -
Viun8g02466 2254 MobiDBLite consensus disorder prediction 2232 2254 - -
Viun8g02466 2254 FunFam Disease resistance protein (TIR-NBS-LRR class) 1106 1278 - -
Viun8g02466 2254 SUPERFAMILY Toll/Interleukin receptor TIR domain 8 155 IPR035897 -
Viun8g02466 2254 Pfam NB-ARC domain 195 408 IPR002182 GO:0043531
Viun8g02466 2254 Pfam NB-ARC domain 1300 1511 IPR002182 GO:0043531
Viun8g02466 2254 SMART till_3 18 152 IPR000157 GO:0007165
Viun8g02466 2254 SMART till_3 1109 1250 IPR000157 GO:0007165
Viun8g02466 2254 SUPERFAMILY "Winged helix" DNA-binding domain 423 523 IPR036390 -
Viun8g02466 2254 Gene3D - 1278 1437 IPR027417 -
Viun8g02466 2254 Gene3D - 1103 1277 IPR035897 -
Viun8g02466 2254 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1110 1876 IPR044974 GO:0006952
Viun8g02466 2254 MobiDBLite consensus disorder prediction 2232 2247 - -
Viun8g02466 2254 Gene3D - 176 341 IPR027417 -
Viun8g02466 2254 SUPERFAMILY L domain-like 543 890 - -
Viun8g02466 2254 Gene3D Ribonuclease Inhibitor 1862 2038 IPR032675 -
Viun8g02466 2254 Pfam TIR domain 1110 1284 IPR000157 GO:0007165
Viun8g02466 2254 Pfam TIR domain 19 183 IPR000157 GO:0007165
Viun8g02466 2254 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1276 1540 IPR027417 -
Viun8g02466 2254 Gene3D - 1445 1530 IPR042197 -
Viun8g02466 2254 Gene3D - 347 431 IPR042197 -
Viun8g02466 2254 Pfam Leucine Rich Repeat 602 621 IPR011713 -
Viun8g02466 2254 SUPERFAMILY Toll/Interleukin receptor TIR domain 1101 1253 IPR035897 -
Viun8g02466 2254 ProSiteProfiles TIR domain profile. 17 177 IPR000157 GO:0007165
Viun8g02466 2254 Gene3D - 12 175 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g02466 Viun-Chr8 34346355 34355484 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g02466 11 882 WRKY Transcription Factor Family AT4G12020 31.403 9.59e-81 295
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g02466 - - vun:114195147 4451.35