Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g02442 ATGATTTCCCACCACAATGGAAACAATCCCTTTCTCTTCTTCCATGGTTCATATAAAAAACCCCTAACAAAACGAAACCCGTTTCCCCTTTCTCCCAAAGTTCCAAGCTTTCCTAGTTCTACGGCTACCCCTGTTCTTCAAGTCTCAAGGGTGCATTTCATTCACTCACACTTTTCCGCGAAACGGTTATCTCGGCAGGTAAAGGGGAAAGTGGAGGATGTGCTGTTAGATTACTTGCATTCGAGCCGGGGATACAGTTTCGTGGATGCCGAGTTCATCAGCAAAAACTCACCATCTTTTGTTCAAGGTTTGGTGTCAGAGTTTCATGGACAAGATGATGATGTTGCCACGTGTTTGAGGAAGTGGCTGTGGTACAACCCCATCAATGAGTTTGAACCATTCTTTGAGAGTTTGGGGATTAGCCCTCATGAGTTGCCTTTGTTTCTCCCACGTGGTATGATGTATTTGTCGGATGATCATGTTATGCTTGCCAATTTCCACGCTTTGAGTAATTATGGAGTTCCAAGGAATAGGGTAGGGAAGATTTATCGAGAGGCAAAGGAGGTTTTCGGGTATCCTAATGGATTGTTGTTGTCGAAATTTCGAGGTTATGAAAATTTAGGTTTGAGTAGATCCATGGTCATCAAGCTTGTTGTTTGTTGCCCTTCACTTTTGGTTGGTGAAACAAGTGTTGAATTGGCCATGGTTCTGGATTGGTTGAAGAAAATTGATATTGGACATGATTGGATTGGGAATTACATGTCTTGTTTGAAAACATATGACCCAAGAAGAATGCTTGATGCTATGCAATTTTTTCATGAAGTGGGTTATACTGAAGAACAGATGCACAATTTCTTCAAGGAAAACCCTGCATTATTACTGGAAGGTCTTGAGAAGAAGCTATATGTATTTTTGGGTCTAGCATTTAAGTTAGGTCTCAATAGGAATGTGATTTATTCTTGTTTTGTAGAATATCCTCATATCTTGACTACGAAGTGTGCAAAAAATCTTTTGGGAGTGATTGGTTTTTTGCATTATCTTGGAATGGATATAGATGACATTTCGCGTATTTTGTCTAACCACATGCATCTCCTGAGCTCACATCCCCTGAAAGGCCCTAAAGCTGTTTGTTCGCAGTTAAAACTTAGAAAAGCTGATTTATGCCAAATCATAAAGGATGATCCACTGAAGCTAATTAGTTTGGCTTCAAAACTGAAACAGAATTCTAATTTACAGTTATTGCGTGATGACCCAAGTAAACATTTGGGGAAAACAACATTCTTGCTGAAGTTGGGATATGCCGAGAACTCTGAGGAGATGGCAAAAGCAGTAAAAAGATTCAGAGGGAGAGGTGATCAATTACAGGAGAGGTTTGATTGCCTAGTTGAAGCTGGTTTGGACTATAACATTGCACTCAAAATGATAAAATGTGCTCCTATGATTCTAAACCAGAAAAAAGTTGTGATTCAAAAGAAGATTGATTTCCTAAGAAACATTTTAGGTTACCCATTAGATTGCGTCGTGGCATTTCCAGCATACTTGTGTTATGATTTAGAGAGAATCATGCTCAGATTTTCAATGTATGCCTGGGTCGCAGAAAGGAAAGCAGCAAAACCTATGATGGCCTTGAGCACTATCCTCGCATCCTCTGATGATAAGTTTGTAAAATACATTGTGAATGCACATCCTGAAGGTCCAGCCATCTGGGATGGTCTAAAGAAGTTATTGCTAAAAGATAAGAGCCAGCTCTTCCCTTAA 1758 0.3987 MISHHNGNNPFLFFHGSYKKPLTKRNPFPLSPKVPSFPSSTATPVLQVSRVHFIHSHFSAKRLSRQVKGKVEDVLLDYLHSSRGYSFVDAEFISKNSPSFVQGLVSEFHGQDDDVATCLRKWLWYNPINEFEPFFESLGISPHELPLFLPRGMMYLSDDHVMLANFHALSNYGVPRNRVGKIYREAKEVFGYPNGLLLSKFRGYENLGLSRSMVIKLVVCCPSLLVGETSVELAMVLDWLKKIDIGHDWIGNYMSCLKTYDPRRMLDAMQFFHEVGYTEEQMHNFFKENPALLLEGLEKKLYVFLGLAFKLGLNRNVIYSCFVEYPHILTTKCAKNLLGVIGFLHYLGMDIDDISRILSNHMHLLSSHPLKGPKAVCSQLKLRKADLCQIIKDDPLKLISLASKLKQNSNLQLLRDDPSKHLGKTTFLLKLGYAENSEEMAKAVKRFRGRGDQLQERFDCLVEAGLDYNIALKMIKCAPMILNQKKVVIQKKIDFLRNILGYPLDCVVAFPAYLCYDLERIMLRFSMYAWVAERKAAKPMMALSTILASSDDKFVKYIVNAHPEGPAIWDGLKKLLLKDKSQLFP 585
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g02442 585 Gene3D Transcription termination factor 3, mitochondrial 124 301 IPR038538 -
Viun8g02442 585 Pfam mTERF 269 408 IPR003690 GO:0003690|GO:0006355
Viun8g02442 585 Pfam mTERF 452 554 IPR003690 GO:0003690|GO:0006355
Viun8g02442 585 SMART mt_12 504 535 IPR003690 GO:0003690|GO:0006355
Viun8g02442 585 SMART mt_12 319 350 IPR003690 GO:0003690|GO:0006355
Viun8g02442 585 SMART mt_12 437 467 IPR003690 GO:0003690|GO:0006355
Viun8g02442 585 SMART mt_12 472 503 IPR003690 GO:0003690|GO:0006355
Viun8g02442 585 SMART mt_12 215 246 IPR003690 GO:0003690|GO:0006355
Viun8g02442 585 SMART mt_12 180 210 IPR003690 GO:0003690|GO:0006355
Viun8g02442 585 PANTHER CGI-12 PROTEIN-RELATED 76 561 IPR003690 GO:0003690|GO:0006355
Viun8g02442 585 Gene3D Transcription termination factor 3, mitochondrial 303 566 IPR038538 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g02442 Viun-Chr8 34107772 34109529 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Viun8g02442 mTERF 9.3e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g02442 - - aprc:113846643 888.256