Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g02440 ATGACTCTCACATGCCTGTTACTATTCTTAACCCAAATTCTGGTGGTAAAAAATTCTGAGGCTAGTAACAATGTCCCTGCTGTTATAGTTTTCGGAGACTCCTCTGTGGATTCTGGGAACAACAACGTCATAGCCACTGTTCTGAAGAGCAACTTCAGGCCCTATGGTCGTGACTTCGAAGGTGGTCGTCCTACGGGACGCTTCTGCAACGGTCGTGTCCCTCCAGATTTCATTGCTGAGGCTTTTGGCGTCAAATCAACCATTCCTGCATACTTAGATCCTGCTTATACCATTCAGGATTTCGCCACTGGTGTTTGCTTTGCCTCTGCTGGAACTGGTTACGATAATGCTACTTCTGCTGTTCTAAACGTGATACCACTGTGGAAGGAACTAGAGTTCTACAAGGAATACCAAGCGAGATTGAGAAGCCATGTTGGTGTAGAAAGAGCGAACGAGATCATAAGCGAAGCCTTGTACTTGATGAGCCTTGGAACCAACGATTTTCTGGAGAACTATTATGTGTTCCCAACCCGAAGGATCCACTACACTGTTTCACAGTATCAAGATTTTCTATTGAGTATTGCAGAGAATTTTGTGCGGGAATTGTACGCACTTGGAGCACGCAAGTTGTCCATAACTGGTCTTGTTCCCGTAGGGTGTCTACCCTTAGAGAGGGCCACAAACATTTTGGGGGACCATGGTTGCAACGAGGAATACAACAACGTTGCTTTGACCTTCAATGCCAAGTTGGAGAATGTGGTAGCAAGGCTTAATAGAGAACTACCGCAGTTTAAAGCACTGTCGGCAAATGCATACTCTGTTTTCAGTGATATCATTGCAAGACCTTCTGCTTATGGATACGAGGTTGTAGACAAGGCGTGTTGTTCGACAGGAACGTTTGAGATGAGCTACTTGTGCAGTGACAGGAATCCTCTTACATGCACAGATGCTGAAAAGTATGTGTTTTGGGATGCATTTCATCCTACTGAAAAGACAAATCGCATAGTTTCAAACTATTTGATTCCGAAGCTGAAAGCAAACTTTAGATGA 1050 0.4438 MTLTCLLLFLTQILVVKNSEASNNVPAVIVFGDSSVDSGNNNVIATVLKSNFRPYGRDFEGGRPTGRFCNGRVPPDFIAEAFGVKSTIPAYLDPAYTIQDFATGVCFASAGTGYDNATSAVLNVIPLWKELEFYKEYQARLRSHVGVERANEIISEALYLMSLGTNDFLENYYVFPTRRIHYTVSQYQDFLLSIAENFVRELYALGARKLSITGLVPVGCLPLERATNILGDHGCNEEYNNVALTFNAKLENVVARLNRELPQFKALSANAYSVFSDIIARPSAYGYEVVDKACCSTGTFEMSYLCSDRNPLTCTDAEKYVFWDAFHPTEKTNRIVSNYLIPKLKANFR 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g02440 349 CDD SGNH_plant_lipase_like 26 343 IPR035669 -
Viun8g02440 349 Gene3D SGNH hydrolase 14 347 IPR036514 -
Viun8g02440 349 SUPERFAMILY SGNH hydrolase 28 345 - -
Viun8g02440 349 Pfam GDSL-like Lipase/Acylhydrolase 28 340 IPR001087 GO:0016788
Viun8g02440 349 PANTHER GDSL ESTERASE/LIPASE EXL3 10 340 - -
Viun8g02440 349 FunFam GDSL esterase/lipase APG 17 345 - -
Viun8g02440 349 Coils Coil 247 267 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g02440 Viun-Chr8 34084740 34088387 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g02440 6 345 Pollen Coat Proteome AT1G75910 35.942 7.27e-66 210
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g02440 - - gmx:100805486 630.557