Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g02436 ATGGGCTTCACTGGGGAATTCGTAAGAACTGTCTTCTCCAAAAATCGTTCTGATGGGTCGCATGAAACCAAAGTGAAACGAAGTAGTGCTGAAAATAGAAGATGGTTATCTGTTAGGTCGTACTTGTGTGGCGATGAATTCAATTCGGTCCTTGCAGAGAATGATTCAGCGTCAGTTAAGAGCACTGAAGTCACGGTTTCACAGTCCATTTTGGAAGAGTTGAATGATAAAGGAGACACCGATAGTGAAGAAACTGTGGAGAATGTAACACAGAAAAGACCAAATTCAGATTCCAGATCATTGACCGAGGAAGAAGCAGCAATTCTTATTCAATCAGCATATAGAGGCTTCCTGTTGAGGCGTCAAAATGGAGAAATCAGATCAGAAACAGGAAAAGAGGAGTTGAATTTGGTAACAGAAAGTCCTGATAGAAAGTCCATGGGCACATCAGTTGAAGTCCAAACTGCAAACTCCACTGAAGTTTTCTCGGTTGAAGGAGAAAAAAAGGGCCTTTGCCACCGAATTCAGCGCAGGACCAGAACTCAAGTAATAAAACAAAAGGAAGACTGGGATGACAGCACTGTAAGTAGTTATGTTTCAAAAATGAGGATGCAGAGTAGAATGGAGGCATCAACCAGAAGAGAAAGAGCACTGGCATATGCTTTCTCACAACAGCTGAGAATCTGTTCAAAGAGAAAATTAACAAAACACAACAGCTTGGAGTCAAATATGAGTTGGAGCTGGCTTGAGAGATGGATGGCAACACGTCTTCCAGAGACTTCATCAGTTGAAAGCCATGCCATGAAGCAATATGACACTTCTAACTGTAATCACAAATTCACAATCATGACAAGATTTTTAGATGCTGCTGGGGAAGAAAAGGAAAGCTGCGGTTCAAACGAGGTGCCACTTCATTTTGATAACTATTCAATCAATTCAGAAGAAGAAAAAGTTAGCTTCAAACCCCACACAGCAAAGTCCAACTTCAAGGCTAGGAGAACCGTTTCAAGGAGGAAAACAGTGCCAAGTTATCAATTCCATGAAGAGCCAAAGGTAAGCAAGAGAGATGGTTGGGGAAATGCTAGTAAGGATGTTAAGCAAAAACAAAAGCAAGTGGGAAGCAGGACAGAGATTACATTAAGCTCCTCGAAAGCTTCTAATGTGTAA 1167 0.4139 MGFTGEFVRTVFSKNRSDGSHETKVKRSSAENRRWLSVRSYLCGDEFNSVLAENDSASVKSTEVTVSQSILEELNDKGDTDSEETVENVTQKRPNSDSRSLTEEEAAILIQSAYRGFLLRRQNGEIRSETGKEELNLVTESPDRKSMGTSVEVQTANSTEVFSVEGEKKGLCHRIQRRTRTQVIKQKEDWDDSTVSSYVSKMRMQSRMEASTRRERALAYAFSQQLRICSKRKLTKHNSLESNMSWSWLERWMATRLPETSSVESHAMKQYDTSNCNHKFTIMTRFLDAAGEEKESCGSNEVPLHFDNYSINSEEEKVSFKPHTAKSNFKARRTVSRRKTVPSYQFHEEPKVSKRDGWGNASKDVKQKQKQVGSRTEITLSSSKASNV 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g02436 388 PANTHER IQ-DOMAIN 5-RELATED 5 361 - -
Viun8g02436 388 MobiDBLite consensus disorder prediction 321 388 - -
Viun8g02436 388 Pfam IQ calmodulin-binding motif 105 122 IPR000048 GO:0005515
Viun8g02436 388 MobiDBLite consensus disorder prediction 342 371 - -
Viun8g02436 388 ProSiteProfiles IQ motif profile. 103 132 IPR000048 GO:0005515
Viun8g02436 388 MobiDBLite consensus disorder prediction 74 101 - -
Viun8g02436 388 MobiDBLite consensus disorder prediction 372 388 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g02436 Viun-Chr8 34051489 34054318 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g02436 1 345 IQD Protein Family AT5G35670 41.294 4.87e-80 251
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g02436 - - gsj:114383427 663.299