Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g02412 ATGCACTTGGAAAACACACTCACTCACACACCAAACTATTACTTACTTACTTACTCTTCTAGGGTTTCAGAAATGGCTTCGTCTTCTTCTTCTACCTTTATCATCGGTTTGATCACCCTTTTGATCCTTGTGTTTGGAAGTGCCAATGCAACACTTTACACAAATTTCTACTCTAGTTCTTGCCCAAAACTCCTTGACACTGTGAAATGCGAAGTGGAATCAGCCATATCAAAGGAGACCCGCATGGGTGCTTCTCTCCTACGTTTGTTCTTCCACGATTGCTTTGTCAATGGGTGTGATGGGTCGATTCTACTGGATGATACATCAAGCTTCACCGGAGAGAAGAACGCAGGTCCTAACAAGAACTCTGCTCGTGGATTTGAAGTGATCGACAAAATCAAATCAGCTGTGGAAAAAGTGTGCCCCGGTGTTGTTTCCTGTGCCGATATCCTTGCCATTGCTGCCAGAGATTCTGTTCAAATCCTTGGTGGCCCAACTTGGAACGTGAAACTTGGAAGAAGAGACTCCAGAACAGCAAGCCAATCTGCTGCCAACAATGGCATCCCACGACCCACTTCAAACCTCAACCAACTCATCTCCAGATTCAACTCTCTTGGACTTTCCTCCAAGGACTTGGTCGCACTATCTGGGGGTCATACAATTGGACTAGCAAGGTGCACAACCTTTAGAGCTCGCATCTACAACGAAACCAACATAGATAGCTCCTTTGCCCACATGAGACAATCTACATGCCCTCGAAACTCAGGATCAGGGGACAACAGCTTAGCACCCCTTGATTTTGCCACTCCTACTTTCTTTGACAATCACTACTTCAAGAACCTCATTCAGAAGAAGGGTCTTCTCCATTCCGATCAACAACTCTTTAATGGTGGTTCCACTGACTCCACTGTGCAAACCTACAGCACCAACCCAGCCTCCTTTTTCACTGATTTCTCCGCTGCTATGATCAAGATGGGAGACATCAGTCCCCTCACCGGCTCCACCGGAGAAATAAGGAAGAACTGCAGAAGGGTGAACTGA 1041 0.463 MHLENTLTHTPNYYLLTYSSRVSEMASSSSSTFIIGLITLLILVFGSANATLYTNFYSSSCPKLLDTVKCEVESAISKETRMGASLLRLFFHDCFVNGCDGSILLDDTSSFTGEKNAGPNKNSARGFEVIDKIKSAVEKVCPGVVSCADILAIAARDSVQILGGPTWNVKLGRRDSRTASQSAANNGIPRPTSNLNQLISRFNSLGLSSKDLVALSGGHTIGLARCTTFRARIYNETNIDSSFAHMRQSTCPRNSGSGDNSLAPLDFATPTFFDNHYFKNLIQKKGLLHSDQQLFNGGSTDSTVQTYSTNPASFFTDFSAAMIKMGDISPLTGSTGEIRKNCRRVN 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g02412 346 FunFam Peroxidase 189 325 - -
Viun8g02412 346 PANTHER PEROXIDASE 72-RELATED 49 345 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun8g02412 346 SUPERFAMILY Heme-dependent peroxidases 52 346 IPR010255 GO:0004601|GO:0006979|GO:0020037
Viun8g02412 346 CDD secretory_peroxidase 52 345 IPR033905 GO:0004601|GO:0042744
Viun8g02412 346 FunFam Peroxidase 55 198 - -
Viun8g02412 346 Gene3D - 55 346 - -
Viun8g02412 346 ProSitePatterns Peroxidases proximal heme-ligand signature. 211 221 IPR019793 -
Viun8g02412 346 Pfam Peroxidase 69 309 IPR002016 GO:0004601|GO:0006979|GO:0020037
Viun8g02412 346 ProSiteProfiles Plant heme peroxidase family profile. 51 346 IPR002016 GO:0004601|GO:0006979|GO:0020037
Viun8g02412 346 Gene3D Peroxidase, domain 2 189 325 - -
Viun8g02412 346 PRINTS Plant peroxidase signature 61 80 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun8g02412 346 PRINTS Plant peroxidase signature 125 138 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun8g02412 346 PRINTS Plant peroxidase signature 210 222 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun8g02412 346 PRINTS Plant peroxidase signature 144 154 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun8g02412 346 PRINTS Plant peroxidase signature 85 105 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun8g02412 346 PRINTS Plant peroxidase signature 163 178 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun8g02412 346 PRINTS Plant peroxidase signature 280 297 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun8g02412 346 PRINTS Plant peroxidase signature 264 279 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun8g02412 346 PRINTS Plant peroxidase signature 320 333 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun8g02412 346 PRINTS Haem peroxidase superfamily signature 83 97 IPR002016 GO:0004601|GO:0006979|GO:0020037
Viun8g02412 346 PRINTS Haem peroxidase superfamily signature 266 281 IPR002016 GO:0004601|GO:0006979|GO:0020037
Viun8g02412 346 PRINTS Haem peroxidase superfamily signature 163 175 IPR002016 GO:0004601|GO:0006979|GO:0020037
Viun8g02412 346 PRINTS Haem peroxidase superfamily signature 211 226 IPR002016 GO:0004601|GO:0006979|GO:0020037
Viun8g02412 346 PRINTS Haem peroxidase superfamily signature 145 162 IPR002016 GO:0004601|GO:0006979|GO:0020037
Viun8g02412 346 ProSitePatterns Peroxidases active site signature. 83 94 IPR019794 GO:0004601
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g02412 Viun-Chr8 33878702 33881072 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g02412 50 346 Peroxidase AT5G05340 75.084 5.76e-169 471
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g02412 K00430 - gmx:100791414 554.288