Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g02405 ATGAAGATTGAATCTCACTCCGACATCATTGAAGCAGTCCAGCCGCTCCTGTCGCCGGAGTGCGGGCACTCGGCGGAGCATCGGAGTGCGCCGAATGGGTCAATCAGCGGAGCGGTGTTCAACATATCGACAACCATGATCGGCGCCGGAATCATGTCGGTTCCGGCGACGATGAAGGTGCTGGGCATAGTTCCGGGGTTCGTGGTGATCCTGTTGGTGGCACTTGTAACAGATGTGACCGTGGAGTTTATGCTGAGGTACACGAGTTCCGGAAAATCCACTACTTACGCGGGCATGATGGGTGAATCGTTTGGGTCCGTTGGATCCCTCGCCGTTAAGATTTGCGTTCTCATAACCAATTTCGGAATCCTTATTATATATCTCATTATTCTAGGAGACGTGCTGTGTGGAAATGAGTCGAACGGAACTACACACTTGGGTGTTCTACAAGAATGGTTTGGCATGAATTGGTGGACCTCTCGTGCTTTTACTCTTCTTATCGTTGTTCTCTTCATAATGCTTCCACTCGTAATGTTACGTCGTGTTGATTCACTAAGGTATACTTCTGCAATATCAATCCTACTGGCATTGGTCTTTCTTGCAATATGCTCATCAATGGCGATCAGTGCATTGTTGTCCGGCAAAACTCAATCACTAAGAATGGTCCCTGATTTCTCTCAAGTCACAGTCCTTGATCTTTTCACCACTATCCCTGTTTTTGTCACTGGTTTCGGATTCCATGTCAATGTTCATCCAATTAGAGCAGAGATTGGAAAAGTTAGACACATGGGTAAGGCTGTGAAGATTTCTCTGGTAATATGCATAGTTGTTTACTTTGCCATTGGCTTCTTTGCGTACCTATTATTTGGGGACTCAATCATGCCCGATGTGTTGGTAAACTTTGATGAAAACTCTGATACCCATGTTGGTCGATTGCTGAATGATATTGTTAGAATAAGCTATGCACTCCATCTTGCCCTTGTCTTCCCCATCATGAACTATTCCTTGAGGATCAACATTGATGAACTTATTTTCTCAAACAAAAATTTACCTCCCTTGGCTTCAGACACCCCAAGATTTGTGTCACTCACTCTGTCTTTGCTTGCCCTCACATACTTGGTGGCTGTGGCCATCCCAAACATTTGGTATTTCTTTCAGTTCTTGGGATCCACAACCGTCGTTTGCACCTCGTTCGTCTTTCCTGCTGCAATTGTTCTAAGGGACATGCATGGCATATCAGAGACAAAAGATCGAGTGATTGCAATTTCGGTCATTGTTTTTGCTGTTGGGACAAGCGGAATTGCTATATGGACCAACTTGAATCCAGGGAATGGTTAA 1338 0.4514 MKIESHSDIIEAVQPLLSPECGHSAEHRSAPNGSISGAVFNISTTMIGAGIMSVPATMKVLGIVPGFVVILLVALVTDVTVEFMLRYTSSGKSTTYAGMMGESFGSVGSLAVKICVLITNFGILIIYLIILGDVLCGNESNGTTHLGVLQEWFGMNWWTSRAFTLLIVVLFIMLPLVMLRRVDSLRYTSAISILLALVFLAICSSMAISALLSGKTQSLRMVPDFSQVTVLDLFTTIPVFVTGFGFHVNVHPIRAEIGKVRHMGKAVKISLVICIVVYFAIGFFAYLLFGDSIMPDVLVNFDENSDTHVGRLLNDIVRISYALHLALVFPIMNYSLRINIDELIFSNKNLPPLASDTPRFVSLTLSLLALTYLVAVAIPNIWYFFQFLGSTTVVCTSFVFPAAIVLRDMHGISETKDRVIAISVIVFAVGTSGIAIWTNLNPGNG 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g02405 445 PANTHER AMINO ACID TRANSPORTER 25 431 - -
Viun8g02405 445 Pfam Transmembrane amino acid transporter protein 33 433 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g02405 Viun-Chr8 33835132 33838397 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g02405 16 440 Amino Acid or Auxin Permease AAAP Family AT3G56200 52.817 6.54e-154 442
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g02405 - - gmx:100794031 692.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun8g02405 8 33835132 33838397 Viun8g02405 8 33835132 33838397 ECH
Viun1g03280 1 40454045 40456526 Viun8g02405 8 33835132 33838397 PCT