Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g02369 ATGGAAAAGAACAGGAAACTCACCCGGTTGCAGGATCTTTGTATAGTTTCGCGCCTTGTGGCGCTTTTTTTCTTGTTTCAGAATTTGGGTTTGTGCTGTTCTTTGAATGAAGAAGGTAATGCTCTTTTGAAGTTCAGGCAGAGAATAGTGAGTGACCCTTTTGGTGCTTTGACAGATTGGGTGGATGATGATGCATCTTTTGACCCTTGTAATTGGTTTGGAGTTGAGTGCTCAGATGAAAGAGTTGTGGCCTTCTTGAGTGATTTTTTGCTCAGGAATTTGAAGGATCTCTGTCTTGAAGGAACTCTGGCACCTGAGCTTGTGAAACTTAACCACATAAAGTCCATTGTTTTACGGAACAACTCTTTCTCTGGAACCATCCCTGAAGGATTTGTGGAGTTGAAAGAATTGGAGGTTTTGGATTTGGGATACAACAACTTCAGTGGATATCTACCTGCCGATCTTGGGAGCAATATCTCACTAGCAATCCTCTTGTTGGATAACAATGAATTTCTTGTGGGTTTCTCCCCGGAAATCAATGAACTGAGGATGCTTTCTGAGTGCCAAGTGGATGAAAATCAGCTAACTAATGCTGCTAAAATGCCAGCTTGTATAGAAAGAGCCACCACATGGCATATTGGTGAAGGTAAAAGTACTAGTCGTGGCCTACTGGCACTGCAACTCCCAAAACCATTGCATCGTGATCATGAAGATGCTCGTAATCGTGCACCACAACAGAAGCCTTCACCTTCTTCTCCTCCTTCACCAGTGCCTCCAAAACCATTTGATCGTGATCATGAAGATCCTCGTAATCGTGCACCACAAGAGAAGCCTTCACCTCTTTCTCCTCCTTCACCAGTGCCAAAGCTAACTCCCCCTGAGAAAAAAGCTGCATCAGGTTCTGGACCACTGTCTAAAACTGAAAAAAGAACTTCACCGAAGGTTCATATTTTGGTTGGAGTTATAGGTGGTACAGTGTTTCTTCTTTTTTCAACCATTGGCTTATATGTTTGTAAAACAAAGGTGGTTAATGTCAGACCTTGGGTCACGGGACTCAGTGGACAGCTGGAGAAGGCATTTGTAACTGGTGCTCAAAAGTTAAGAAGATTGAATCTTGAAGTAGCATGTGAAGATTTTAGTAATGTAATTGGTACTTCGCCTATTGGCACAGTGTACAAAGGAACTTTGTCTAGTGGCGTTGAAATAGCTGTAACTTCTGTTCCGGTGACATCATCCAAGAATTGGTCAAAGACTTTAGAAGTTCAATTTAGAAACAAGATAGATACATTATCGAAAGTGAACCACAAGAATTTTGTAAATCTTATTGGATACTGTGAAGAAGAAGAGCCTTTCACCAGAATGTTGGTTTTTGAATATGCCCCAAATGGAACACTATTTGAGCATTTACACATAAAAGAGGCTGAGCACTTGGATTGGGTAACAAGGCTTAGAGTTGCAACGGGTATGGCTTATTGCTTGCAGCATATGCACCAATTGGACCCTCCTATGGCCCTTATCAAGCTGAATTCTCAAACTGTTTACTTGACCGATGACTATGCTGCAAAACTCTCAGATTTGAGTTTCTCATATGACATAACCTCATCTGAGACAAAAGCCATTGACATGCCAAAAGCAAGTCTAGAAAGTAACGTTTATAGCTTTGGTGTTTTGTTATTTGAGATGGTTACTGGTCGTCTCCCTTATTCAGTGGAACAAAGGAACTCACTTGAAAACTGGGCATCACACTATTTACAAGGAGACCAACCCCTCAAGAATATGGTGGATCCAATTCTTGAATCTTACCAAGAGGATCAGCTTGAACAAGTTGCTGCATTGATTAAATCTTGTGTGCACCAAGATCCAAAGCAGAGACCAACAATAAAAGATGTCAGTGAAAGACTAAGAGAGATAACAAAGATAACACCTGAATCAGCAGTTCCAAAACTTTCTCCACTGTGGTGGGCAGAGCTTGAGATTGCTTCTACAGAAATGTGTTGA 1998 0.4139 MEKNRKLTRLQDLCIVSRLVALFFLFQNLGLCCSLNEEGNALLKFRQRIVSDPFGALTDWVDDDASFDPCNWFGVECSDERVVAFLSDFLLRNLKDLCLEGTLAPELVKLNHIKSIVLRNNSFSGTIPEGFVELKELEVLDLGYNNFSGYLPADLGSNISLAILLLDNNEFLVGFSPEINELRMLSECQVDENQLTNAAKMPACIERATTWHIGEGKSTSRGLLALQLPKPLHRDHEDARNRAPQQKPSPSSPPSPVPPKPFDRDHEDPRNRAPQEKPSPLSPPSPVPKLTPPEKKAASGSGPLSKTEKRTSPKVHILVGVIGGTVFLLFSTIGLYVCKTKVVNVRPWVTGLSGQLEKAFVTGAQKLRRLNLEVACEDFSNVIGTSPIGTVYKGTLSSGVEIAVTSVPVTSSKNWSKTLEVQFRNKIDTLSKVNHKNFVNLIGYCEEEEPFTRMLVFEYAPNGTLFEHLHIKEAEHLDWVTRLRVATGMAYCLQHMHQLDPPMALIKLNSQTVYLTDDYAAKLSDLSFSYDITSSETKAIDMPKASLESNVYSFGVLLFEMVTGRLPYSVEQRNSLENWASHYLQGDQPLKNMVDPILESYQEDQLEQVAALIKSCVHQDPKQRPTIKDVSERLREITKITPESAVPKLSPLWWAELEIASTEMC 665
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g02369 665 Gene3D Phosphorylase Kinase; domain 1 355 459 - -
Viun8g02369 665 Pfam Protein tyrosine and serine/threonine kinase 380 634 IPR001245 GO:0004672|GO:0006468
Viun8g02369 665 ProSiteProfiles Protein kinase domain profile. 377 638 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun8g02369 665 MobiDBLite consensus disorder prediction 276 291 - -
Viun8g02369 665 Pfam Leucine rich repeat 112 170 IPR001611 GO:0005515
Viun8g02369 665 Pfam Leucine rich repeat N-terminal domain 36 78 IPR013210 -
Viun8g02369 665 FunFam Leucine-rich repeat receptor-like kinase 38 163 - -
Viun8g02369 665 MobiDBLite consensus disorder prediction 234 310 - -
Viun8g02369 665 SUPERFAMILY Protein kinase-like (PK-like) 366 634 IPR011009 -
Viun8g02369 665 MobiDBLite consensus disorder prediction 260 274 - -
Viun8g02369 665 FunFam Inactive receptor-like serine/threonine-protein kinase 351 459 - -
Viun8g02369 665 SUPERFAMILY L domain-like 37 198 - -
Viun8g02369 665 Gene3D Ribonuclease Inhibitor 33 212 IPR032675 -
Viun8g02369 665 Gene3D Transferase(Phosphotransferase) domain 1 460 646 - -
Viun8g02369 665 PANTHER PROTEIN MALE DISCOVERER 2 15 663 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g02369 Viun-Chr8 33578790 33582789 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g02369 13 642 Receptor kinase-like Gene Family AT2G35620 26.100 4.56e-43 162
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Viun8g02369 PK_Tyr_Ser-Thr 1e-23 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g02369 - - gmx:100792450 973.77