Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g02368 ATGGAAAAGAACAGGAAACTCACCCGGTTGCAGGATCTTTGTATAGTTTCGCGCCTTGTGGCGCTTTTTTTCTTGTTTCAGAATTTGGGTTTGTGCTGTTCTTTGAATGAAGAAGGTAATGCTCTTTTGAAGTTCAGGCAGAGAATAGTGAGTGACCCTTTTGGTGCTTTGACAGATTGGGTGGATGATGATGCATCTTTTGACCCTTGTAATTGGTTTGGAGTTGAGTGCTCAGATGAAAGAGTTGTGGCCTTGAATTTGAAGGATCTCTGTCTTGAAGGAACTCTGGCACCTGAGCTTGTGAAACTTAACCACATAAAGTCCATTGTTTTACGGAACAACTCTTTCTCTGGAACCATCCCTGAAGGATTTGTGGAGTTGAAAGAATTGGAGGTTTTGGATTTGGGATACAACAACTTCAGTGGATATCTACCTGCCGATCTTGGGAGCAATATCTCACTAGCAATCCTCTTGTTGGATAACAATGAATTTCTTGTGGGTTTCTCCCCGGAAATCAATGAACTGAGGATGCTTTCTGAGTGCCAAGTGGATGAAAATCAGCTAACTAATGCTGCTAAAATGCCAGCTTGTATAGAAAGAGCCACCACATGGCATATTGGTGAAGGTAAAAGTACTAGTCGTGGCCTACTGGCACTGCAACTCCCAAAACCATTGCATCGTGATCATGAAGATGCTCGTAATCGTGCACCACAACAGAAGCCTTCACCTTCTTCTCCTCCTTCACCAGTGCCTCCAAAACCATTTGATCGTGATCATGAAGATCCTCGTAATCGTGCACCACAAGAGAAGCCTTCACCTCTTTCTCCTCCTTCACCAGTGCCAAAGCTAACTCCCCCTGAGAAAAAAGCTGCATCAGGTTCTGGACCACTGTCTAAAACTGAAAAAAGAACTTCACCGAAGGTTCATATTTTGGTTGGAGTTATAGGTGGTACAGTGTTTCTTCTTTTTTCAACCATTGGCTTATATGTTTGTAAAACAAAGGTGGTTAATGTCAGACCTTGGGTCACGGGACTCAGTGGACAGCTGGAGAAGGCATTTGTAACTGGTGCTCAAAAGTTAAGAAGATTGAATCTTGAAGTAGCATGTGAAGATTTTAGTAATGTAATTGGTACTTCGCCTATTGGCACAGTGTACAAAGGAACTTTGTCTAGTGGCGTTGAAATAGCTGTAACTTCTGTTCCGGTGACATCATCCAAGAATTGGTCAAAGACTTTAGAAGTTCAATTTAGAAACAAGATAGATACATTATCGAAAGTGAACCACAAGAATTTTGTAAATCTTATTGGATACTGTGAAGAAGAAGAGCCTTTCACCAGAATGTTGGTTTTTGAATATGCCCCAAATGGAACACTATTTGAGCATTTACACATAAAAGAGGCTGAGCACTTGGATTGGGTAACAAGGCTTAGAGTTGCAACGGGTATGGCTTATTGCTTGCAGCATATGCACCAATTGGACCCTCCTATGGCCCTTATCAAGCTGAATTCTCAAACTGTTTACTTGACCGATGACTATGCTGCAAAACTCTCAGATTTGAGTTTCTCATATGACATAACCTCATCTGAGACAAAAGCCATTGACATGCCAAAAGCAAGTCTAGAAAGTAACGTTTATAGCTTTGGTGTTTTGTTATTTGAGATGGTTACTGGTCGTCTCCCTTATTCAGTGGAACAAAGGAACTCACTTGAAAACTGGGCATCACACTATTTACAAGGAGACCAACCCCTCAAGAATATGGTGGATCCAATTCTTGAATCTTACCAAGAGGATCAGCTTGAACAAGTTGCTGCATTGATTAAATCTTGTGTGCACCAAGATCCAAAGCAGAGACCAACAATAAAAGATGTCAGTGAAAGACTAAGAGAGATAACAAAGATAACACCTGAATCAGCAGTTCCAAAACTTTCTCCACTGTGGTGGGCAGAGCTTGAGATTGCTTCTACAGAAATGTGTTGA 1977 0.4143 MEKNRKLTRLQDLCIVSRLVALFFLFQNLGLCCSLNEEGNALLKFRQRIVSDPFGALTDWVDDDASFDPCNWFGVECSDERVVALNLKDLCLEGTLAPELVKLNHIKSIVLRNNSFSGTIPEGFVELKELEVLDLGYNNFSGYLPADLGSNISLAILLLDNNEFLVGFSPEINELRMLSECQVDENQLTNAAKMPACIERATTWHIGEGKSTSRGLLALQLPKPLHRDHEDARNRAPQQKPSPSSPPSPVPPKPFDRDHEDPRNRAPQEKPSPLSPPSPVPKLTPPEKKAASGSGPLSKTEKRTSPKVHILVGVIGGTVFLLFSTIGLYVCKTKVVNVRPWVTGLSGQLEKAFVTGAQKLRRLNLEVACEDFSNVIGTSPIGTVYKGTLSSGVEIAVTSVPVTSSKNWSKTLEVQFRNKIDTLSKVNHKNFVNLIGYCEEEEPFTRMLVFEYAPNGTLFEHLHIKEAEHLDWVTRLRVATGMAYCLQHMHQLDPPMALIKLNSQTVYLTDDYAAKLSDLSFSYDITSSETKAIDMPKASLESNVYSFGVLLFEMVTGRLPYSVEQRNSLENWASHYLQGDQPLKNMVDPILESYQEDQLEQVAALIKSCVHQDPKQRPTIKDVSERLREITKITPESAVPKLSPLWWAELEIASTEMC 658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g02368 658 Pfam Leucine rich repeat 105 163 IPR001611 GO:0005515
Viun8g02368 658 SUPERFAMILY Protein kinase-like (PK-like) 359 627 IPR011009 -
Viun8g02368 658 PANTHER PROTEIN MALE DISCOVERER 2 15 656 - -
Viun8g02368 658 MobiDBLite consensus disorder prediction 227 303 - -
Viun8g02368 658 FunFam Nuclear pore complex protein NUP107 35 194 - -
Viun8g02368 658 Gene3D Transferase(Phosphotransferase) domain 1 453 639 - -
Viun8g02368 658 SUPERFAMILY L domain-like 37 191 - -
Viun8g02368 658 MobiDBLite consensus disorder prediction 253 267 - -
Viun8g02368 658 FunFam Inactive receptor-like serine/threonine-protein kinase 344 452 - -
Viun8g02368 658 Gene3D Ribonuclease Inhibitor 33 205 IPR032675 -
Viun8g02368 658 Pfam Protein tyrosine and serine/threonine kinase 373 627 IPR001245 GO:0004672|GO:0006468
Viun8g02368 658 MobiDBLite consensus disorder prediction 269 284 - -
Viun8g02368 658 ProSiteProfiles Protein kinase domain profile. 370 631 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun8g02368 658 Gene3D Phosphorylase Kinase; domain 1 348 452 - -
Viun8g02368 658 Pfam Leucine rich repeat N-terminal domain 36 78 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g02368 Viun-Chr8 33578790 33582789 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g02368 13 635 Receptor kinase-like Gene Family AT2G35620 26.534 6.52e-46 170
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Viun8g02368 PK_Tyr_Ser-Thr 1e-23 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g02368 - - gmx:100792450 978.008