Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g02365 ATGAAGGGTTACGAGCCACGTTCGAGTTCCTCTTGTGCAGCCTGCAAGTTCTTGAAGCGAAGATGCATACCCAATTGTATATTTGCACCTTACTTTCGCTCTGATGAGTGCAAGAAATTTGCCAAGGTGCACAAGGTTTTCGGAGCCAGCAATGTGAGCAAGATCCTCATCGAAGTTCCCGAGGAGCAGAGAGAGGACACGGTCAATTCTCTCGCTTATGAAGCCGAAGCCAGGCTCAGAGACCCCATTTATGGATGTATTGGTGCCATAGCTCTTCTTCAGAGGAAGATGGTGGAGCTTCAACACGACCTTGCCATTGCTAAGGATCGTCTTGCTCGTTATGCTGCCGCCGCCACCACCACCACTCCTTCCGCCGCCGCCACCACCACCTTCAATTCCCATGTTAGTTTGCCACCTTTCCCTGAATATTTCTCTTGCAACGATTTCAGTGACAACTTCTGCCACAACTCTTCTTCCTCTCAATCTCCGCCATTGACCAGACACGAAATGGTCGATGATTTCATTCAAATCCCTTATATATTATGA 546 0.4853 MKGYEPRSSSSCAACKFLKRRCIPNCIFAPYFRSDECKKFAKVHKVFGASNVSKILIEVPEEQREDTVNSLAYEAEARLRDPIYGCIGAIALLQRKMVELQHDLAIAKDRLARYAAAATTTTPSAAATTTFNSHVSLPPFPEYFSCNDFSDNFCHNSSSSQSPPLTRHEMVDDFIQIPYIL 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g02365 181 Coils Coil 90 117 - -
Viun8g02365 181 ProSiteProfiles LOB domain profile. 10 111 IPR004883 -
Viun8g02365 181 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 9 133 - -
Viun8g02365 181 Pfam Lateral organ boundaries (LOB) domain 11 108 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g02365 Viun-Chr8 33555745 33556711 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g02365 1 144 AS2 family AT3G11090 62.500 4.72e-64 192
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Viun8g02365 LOB 1.2e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g02365 - - gmx:100777635 297.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun8g02365 8 33555745 33556711 Viun8g02365 8 33555745 33556711 ECH