Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g02361 ATGATGACGGGCGTTGGCAACGATCGAGTGAAGGGCTCGTGGAGTCCTCAAGAAGATGCGACGCTATTAAAATTGGTGAACGAACACGGCGCGCGGAATTGGTCCCTCATCAGCAGCGGCATTCCCGGCCGCTCTGGCAAGTCCTGCCGGTTGCGATGGTGCAACCAGCTGAGTCCAGAGGTGCAGCACCGTCCCTTCACGTCGGCGGAGGACGAGATCATCATCAAGGCGCACGCTATTCACGGAAACAAATGGGCTACCATCTCGCGCCTCCTTCCTGGCCGCACCGATAACGCCATCAAGAATCACTGGAACTCCACCCTCCGGCGCCGTGGCACGGTGGAGCAGTCGTCGTCGGCATCACCAAACACTAAACGCGCCTCTCCGTTCGGGTGGGACTACCCTGTCAAGAAACAGCGTGCGGAGGAAGAGAGAGAGGAGGAGCGAATTGCGATTCCGTTGAGTCTTTTTCCGTTTGATGAGAAATCAGAGGGAGAAGTGGAAGAGGAAGAGGAAAGAGTGAGAGAGGAGGTTAGAGTGAATAATAATAATAATAATAATAATAATACCCGGGCTTCGGATCACGATTGTTTTATGCAGATGATGCAGCGCATGATTGCTGATGAGGTTAGGAATTATGTTAATAGTTTGTGCAATCGAAATCTTTACCTTCATCCGCATTAG 684 0.5219 MMTGVGNDRVKGSWSPQEDATLLKLVNEHGARNWSLISSGIPGRSGKSCRLRWCNQLSPEVQHRPFTSAEDEIIIKAHAIHGNKWATISRLLPGRTDNAIKNHWNSTLRRRGTVEQSSSASPNTKRASPFGWDYPVKKQRAEEEREEERIAIPLSLFPFDEKSEGEVEEEEERVREEVRVNNNNNNNNNTRASDHDCFMQMMQRMIADEVRNYVNSLCNRNLYLHPH 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g02361 227 CDD SANT 65 108 IPR001005 -
Viun8g02361 227 Pfam Myb-like DNA-binding domain 11 57 IPR001005 -
Viun8g02361 227 Pfam Myb-like DNA-binding domain 65 107 IPR001005 -
Viun8g02361 227 PANTHER MYB PROTEIN-RELATED 11 132 - -
Viun8g02361 227 FunFam MYB transcription factor 11 62 - -
Viun8g02361 227 SMART sant 62 110 IPR001005 -
Viun8g02361 227 SMART sant 10 59 IPR001005 -
Viun8g02361 227 ProSiteProfiles Myb-like domain profile. 6 57 IPR001005 -
Viun8g02361 227 MobiDBLite consensus disorder prediction 109 132 - -
Viun8g02361 227 FunFam Transcription factor MYB44 65 111 - -
Viun8g02361 227 ProSiteProfiles Myb-like domain profile. 58 108 IPR001005 -
Viun8g02361 227 MobiDBLite consensus disorder prediction 162 192 - -
Viun8g02361 227 SUPERFAMILY Homeodomain-like 8 104 IPR009057 -
Viun8g02361 227 CDD SANT 13 55 IPR001005 -
Viun8g02361 227 Gene3D - 64 129 - -
Viun8g02361 227 MobiDBLite consensus disorder prediction 109 126 - -
Viun8g02361 227 Gene3D - 10 62 - -
Viun8g02361 227 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 112 IPR017930 -
Viun8g02361 227 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 6 61 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g02361 Viun-Chr8 33503884 33504912 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g02361 8 138 MYB Transcription Factor Family AT4G37260 65.909 1.17e-55 178
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Viun8g02361 Myb_DNA-binding 7.1e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g02361 - - vra:106763298 327.405
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun8g02361 8 33503884 33504912 Viun8g02361 8 33503884 33504912 ECH