Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g02345 ATGACGTTCAAGCGTAGGAACGGAGGACGCAACAAGCACGGTCGCGGCCACGTCAAATTCATTCGTTGCTCCAACTGCGGCAAATGCTGCCCTAAGGATAAGGCAATCAAGAGGTTTCTCGTGAGGAACATTGTTGAGCAAGCTGCAGTCAGAGATGTGCAGGAGGCTTGTGTCTATGAGCAATACACGCTTCCCAAACTGTATGTGAAGATGCAGTACTGTGTTTCGTGTGCTATCCACTCTCATGTTGTTCGGGTTCGATCCCGCACTGACAGGAGAAAGCGTGAGCCTCCACAGCGATTCATCAGGCGCAGGGATGATGCACCAAGGCCTGGTCAGCCTGGTCAAGCACCTCGTCCTCCCGTTGCAGGAGCTCCTGTCCGAACCTAA 390 0.5333 MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYEQYTLPKLYVKMQYCVSCAIHSHVVRVRSRTDRRKREPPQRFIRRRDDAPRPGQPGQAPRPPVAGAPVRT 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g02345 129 ProSitePatterns Ribosomal protein S26e signature. 73 80 IPR000892 GO:0003735|GO:0005840|GO:0006412
Viun8g02345 129 FunFam 40S ribosomal protein S26 1 114 - -
Viun8g02345 129 MobiDBLite consensus disorder prediction 86 129 - -
Viun8g02345 129 Pfam Ribosomal protein S26e 1 106 IPR000892 GO:0003735|GO:0005840|GO:0006412
Viun8g02345 129 Gene3D Ribosomal protein S26e 1 114 IPR038551 -
Viun8g02345 129 PANTHER 40S RIBOSOMAL PROTEIN S26 1 121 IPR000892 GO:0003735|GO:0005840|GO:0006412
Viun8g02345 129 MobiDBLite consensus disorder prediction 90 110 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g02345 Viun-Chr8 33392412 33394605 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g02345 1 116 Cytoplasmic Ribosomal Protein Gene Family AT2G40590 84.483 1.23e-69 203
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g02345 K02976 - gmx:100499862 211.46