Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g02341 ATGGCTGTGTCCAACGGCGTCGAAGCAGTGTTAGAGTTTCTGCGGAAGAATGGGTTGTCGGAAGCGGAGTCCGCGCTTCGAGAAGACATCATCGAGAACACCGACCTGGGAAACTTCGACTACGAGAAGTTCTTCTTCCCCATGGTCCCGCCGCCGCCGCCGGTCAGAGTCCGATCCTTCTCCCTACCGTCCGAGCTCGCCGCTGCGGACGAGGACTCCTCCAAATCCAGCTCGGATGAGTTCGTCACCATCGATTCTTCCACTTCTCGCGTCTCGTCTTCAGAATTCGTAAATCCATATGGAATCCGTTCCTCATCACAGACTCAGAATGATTCGGAGTCTTCGTCTGAAAGATTATCTCAGTTTGGCACAGCACGTGATTATCACGATTTCGATATGCAAAATGAACCGTATTGGTATAATGAAAAAGATGATGAATATTTCATGACTCCTAGTTTTGAAGGGCCAGACTATTTTGCGTGTCGGAGTGAAGATAAGTTTGTCATGACAGCAGAAACGGACAACCAACGTGACAATTCTCTGAATCTTGATTACAACTACGAAGAATTTCAACTAAAGGGGAATGGTAATGGTAATGGTGGTTACATGGACAAGGCATGCCTCGATAACCATTCCTCTGTAGTTGATGGAACTGTGACTCATTCAAAAGGGTATTGCCATGTTGATAACAAGGACCAGTTTGAAGGGGAATTAGAGGGTAATGCTGAGAAACCCAGTGTTTCCTGCAGTTGTGAAGTTCCATTTTGCAAAAGCAGTCCTGGTTCTGGAGGTTCTTGCAGTCTGGATCCTACAAACTTCGGCTACCCTAACTTGAAGGAAATCCATCTGAACAATTTTCATTTGGGGGTTGTTGGGGACATTAACTCTTTTGATTCTACTTCAGAGCTAACTCTGAATCAAAATTTTGGCCACTACACTAAAAACGACAGCAGTAAGGAGTACAAGGGTCCTTACGACTTAACTATCGAAGTTACTGATAAAAATCTACCAAATGGACTTGACACCTATAAAGCACAACTTGGTGGAGAATTAACTGAAGACCGTCAAGATCCAGAGTTTGCCGCAGATGAAGAGGATACAACTGATGATGAGCTCTTGAAGTATACTCAAGAGGAAGAATACGAAGTGTTTGATCTGAGGATTATACATAGAAAGAACAGGACTGGATTTGAAGAAAACAAGGAACTTCCGATTGTGCTAAATACAGTCTTGGCTGGAAGGTATTATTTAACCGAGTATCTTGGTTCAGCTGCCTTCAGTAGGGTTGTTCAGGCACATGATCTTCGGACAGGGATAGATGTTTGTTTGAAGATTATTAAAAATGACAAAGACTTCTTTGATCAAAGCTTAGATGAAATCAAGCTTCTGAAACTTGTCAATAAGGGTGACCCAGCAGATAAACATCACATTTTGCGCCTTTATGACTATTTCTACCATCAGAAATTCAACCAAGAATCTGGAGGGGAAGCATATTTTACATTAAAGAGATTGCAGATCATTACTCGTCAGTGTTTGGAAGCATTGCAATACTTGCATGGCTTGGGAATTGTTCACTGTGACCTGAAGCCAGAAAACATTCTAATCAAAAGTTACAAAAGATGTGAGATAAAGGTTATTGATCTTGGAAGTAGTTGCTTCCAAACTGACAATCTGTGCCTGTATGTACAGTCCAGATCTTATAGAGCTCCTGAAGTGATGTTAGGTCTTCAATATGATGAGAAGATTGATATATGGTCTCTCGGATGCATCTTGGCGGAGCTATGCTCTGGTGAAGTTCTGTTTCCAAATGATGCAGTTGTGATGATCCTGGCACGCATAATTGGAATGTTTGGTTCTATTGATATGGAAATGTTGGTGAAAGGACAAGAAACGCACAAGTACTTCACCAAAGAATATGATATTTATTATATAAATGAGGAGACTGATCAACTGGAGTTCTTGATTCCAGAAGAGTCATCGTTGGAGCAGCACCTACAGGTTACTGATACTATGTTTATCAACTTTATCAGATACCTACTCTGCATCAACCCCAAGAGAAGGCCTACTGCAAGACAAGCACTAAAGCATCCATGGCTTTCCTATGTTTACTAA 2112 0.4214 MAVSNGVEAVLEFLRKNGLSEAESALREDIIENTDLGNFDYEKFFFPMVPPPPPVRVRSFSLPSELAAADEDSSKSSSDEFVTIDSSTSRVSSSEFVNPYGIRSSSQTQNDSESSSERLSQFGTARDYHDFDMQNEPYWYNEKDDEYFMTPSFEGPDYFACRSEDKFVMTAETDNQRDNSLNLDYNYEEFQLKGNGNGNGGYMDKACLDNHSSVVDGTVTHSKGYCHVDNKDQFEGELEGNAEKPSVSCSCEVPFCKSSPGSGGSCSLDPTNFGYPNLKEIHLNNFHLGVVGDINSFDSTSELTLNQNFGHYTKNDSSKEYKGPYDLTIEVTDKNLPNGLDTYKAQLGGELTEDRQDPEFAADEEDTTDDELLKYTQEEEYEVFDLRIIHRKNRTGFEENKELPIVLNTVLAGRYYLTEYLGSAAFSRVVQAHDLRTGIDVCLKIIKNDKDFFDQSLDEIKLLKLVNKGDPADKHHILRLYDYFYHQKFNQESGGEAYFTLKRLQIITRQCLEALQYLHGLGIVHCDLKPENILIKSYKRCEIKVIDLGSSCFQTDNLCLYVQSRSYRAPEVMLGLQYDEKIDIWSLGCILAELCSGEVLFPNDAVVMILARIIGMFGSIDMEMLVKGQETHKYFTKEYDIYYINEETDQLEFLIPEESSLEQHLQVTDTMFINFIRYLLCINPKRRPTARQALKHPWLSYVY 703
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g02341 703 Gene3D Transferase(Phosphotransferase) domain 1 469 699 - -
Viun8g02341 703 PANTHER DUAL SPECIFICITY PROTEIN KINASE 107 699 - -
Viun8g02341 703 ProSiteProfiles Protein kinase domain profile. 415 699 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun8g02341 703 ProSitePatterns Serine/Threonine protein kinases active-site signature. 523 535 IPR008271 GO:0004672|GO:0006468
Viun8g02341 703 SUPERFAMILY Protein kinase-like (PK-like) 404 700 IPR011009 -
Viun8g02341 703 CDD PKc_DYRK_like 415 699 - -
Viun8g02341 703 FunFam Serine/threonine-protein kinase ppk15 475 700 - -
Viun8g02341 703 MobiDBLite consensus disorder prediction 349 368 - -
Viun8g02341 703 MobiDBLite consensus disorder prediction 98 121 - -
Viun8g02341 703 Pfam Protein kinase domain 418 699 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun8g02341 703 Gene3D Phosphorylase Kinase; domain 1 410 492 - -
Viun8g02341 703 SMART serkin_6 415 699 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g02341 Viun-Chr8 33342131 33347747 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g02341 412 694 MAP Kinase Gene Family AT5G19010 30.255 8.00e-29 119
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_DYRK-PRP4 Viun8g02341 Pkinase 1.5e-43 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun8g02341 8 33342131 33347747 Viun8g02341 8 33342131 33347747 ECH