Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g02339 ATGAAGAAGAATAATTCACTCTTCTCCGCCGTTACTTTCACCCTCTTCACTGCCACCCTCTTAATCCTCTCTTCACTGTCACCCTCCCATGCCATTGGTTCCGCCTCCACCCTCGCCGTCACTTCCGCCGCCGTATGCGGCGTGGTGGCATCGGAGCCGACACGGCGCATTGCGTGCTACAGCGATGGCCACGTCGTCGCCGTCGCCCCCAACATCTCGTTCTCCGCGATCTCCGGCGGCCTGAGCTACTTCTGCGGCCTCCGGTCCGGCAACTACACTCTTCTCTGCTGGGACACCCTTTCTTACTTCCAAAGCAAGAGACTTTACAACAATGACACTGTTCTATTCGAGAATCTCGCCCTCGGGGAGTCCCAGGTTTGCGCCACCGCGGTCGGCGATGGAGCGGTGTCGTGTTGGAGAACCAATGCCGCCTTCGAATTGCCTTCTGGGTCGGACCGGTTTTCTTCTATTTCATCTGGGTTGGGTTTTTCTTGCGGAATTTTGAAGGGTAGTAATTGGGTTCGGTGTTGGGGGGTTGAGGCTAGAGCGAGAAAAATGGAGAGTGAGTTTGGGAACGTGTCTATGGCGAGTCTTGTGGCTGGGGAGTCACATGTTTGTGGGTTGAATTCAAGTGGGTATTTGGTTTGTCGAGGAAGTAACGATTTTGGTCAGATTGACGTTCCTGAAGGAGGGGCTTTGGAGTTTTCTGGTTTGGCTCTTGGAGCTGAGCATAGTTGTGCTATTCGGAGATCCAATGGTTCTGTCGTGTGTTGGGGCGGGAGAGGGTTGTTTGAGGTTAATGTTACAAAAGGTGTTTCTTTTGAGGTTCTTGTTTCTGGGTCCAATTTTACTTGTGGATTGACGACTAACAATTTTTCAGTTATTTGTTGGGGTCCTGGTTGGGCTAATAATACTTCAGGTTATGAAATTCCTTTGCCTCCTATACTTCCAGGGCCTTGTGTTCAATCTTCCTGCAGTGAATGTGGGATATATCCTCAATCGGAGTCTCTCTGTTCTGGCTTTGGTAACATCTGTAAGCCAAGACCTTGTTGGCCTCCAATGCCAGGGCCAGAACCACCACAAATGGCGCCGCCGCCTGTGGTGGCGGTGCCACCTGCGTCTCAATCAAGTGCCTTCACCAAAGGGTTATTGGCATTTGCCATTGTTGGATGCGTGGGAGGTGTTACTGGGATATGCAGTGTGATTTATTGCTTATGGACTGGGGTTTGTTTAGGGAAGAAGAAAATTCACAATTCTGTGCAGCCAACAATCACTAGAGGTGGCAGTGTAAACGGTGGTGGCGGTGGTTCTAGCAATAGTATTAGTCCTCCGTCGAGATCATCCACCATTAGGCGTCAAGGGTCGCGGATAATGAGACGCCAAAGGAGTGGAACCTCATCAACAAAGCATCCTGAAAGGGCTGAAGAATTCACCTTGGCTGAGCTTGTTGCAGCTACGGATAATTTCTCCCTTGAGAACAAGATTGGTGCCGGAAGCTATGGCGTCGTCTATAGAGGCAAACTTGCAGATGGCCGTGAGGTGGCAATCAAAAGGGGCGAAACAGGCACCAAGATGAAGAAGTTTCAAGAGAAAGAGAGCGCATTCGAGTCAGAATTGGCCTTCTTGTCCCGTTTACACCACAAGCACTTGGTAAGGCTGGTGGGGTTCTGTGAGGAGAAAGACGAGAGGCTCTTGGTGTATGAGTACATGAAGAATGGAGCATTGTATGATCATTTGCATGACAAAAACAATGTGGATAAAAGTAGCAGTGTCGTGAACTCTTGGCGAATGAGGATCAAAATCGCTCTGGATGCTTCGCGAGGAATTGAGTATCTCCATAACTACGCAGTTCCATCTATAATTCACCGAGACATAAAGTCTTCAAACATTCTCATTGACGCGACTTGGACGGCGAGAGTATCCGATTTTGGATTGTCATTGATGAGTCCAGAATCTGACCTTGATTATCGACCAACGAAGGCAGCAGGAACAGTAGGATACATTGATCCTGAATATTATGGTCTAAATGTATTGACAGCAAAGAGTGATGTGTATGGTCTTGGAGTGGTACTGCTAGAGCTATTAACAGGAAAGAGAGCAATATTCAAGAATGACGAAAATGGAGGCACCCCAGTGAGTTTGGTGGACTTTGCAGTGCCAGTTATTATGGCAGGAGAATTGGCAAAAATTTTGGACCCAAGGGTTGAACCACCAGAGTTAAATGAGACAGAGGCAGTGGAGCTAGTGGCATATACAGCTATGCATTGTGTAAATTTGGAGGGGAAGGACAGACCAACAATGGCTGATATTGTGGCAAATTTGGAGCGTGCTTTGGCTCTCTGTGATAGTAGTCATGGCAGCATTTCCAGTGGTACAGTCTCCATTGTATCAGACTGA 2397 0.4852 MKKNNSLFSAVTFTLFTATLLILSSLSPSHAIGSASTLAVTSAAVCGVVASEPTRRIACYSDGHVVAVAPNISFSAISGGLSYFCGLRSGNYTLLCWDTLSYFQSKRLYNNDTVLFENLALGESQVCATAVGDGAVSCWRTNAAFELPSGSDRFSSISSGLGFSCGILKGSNWVRCWGVEARARKMESEFGNVSMASLVAGESHVCGLNSSGYLVCRGSNDFGQIDVPEGGALEFSGLALGAEHSCAIRRSNGSVVCWGGRGLFEVNVTKGVSFEVLVSGSNFTCGLTTNNFSVICWGPGWANNTSGYEIPLPPILPGPCVQSSCSECGIYPQSESLCSGFGNICKPRPCWPPMPGPEPPQMAPPPVVAVPPASQSSAFTKGLLAFAIVGCVGGVTGICSVIYCLWTGVCLGKKKIHNSVQPTITRGGSVNGGGGGSSNSISPPSRSSTIRRQGSRIMRRQRSGTSSTKHPERAEEFTLAELVAATDNFSLENKIGAGSYGVVYRGKLADGREVAIKRGETGTKMKKFQEKESAFESELAFLSRLHHKHLVRLVGFCEEKDERLLVYEYMKNGALYDHLHDKNNVDKSSSVVNSWRMRIKIALDASRGIEYLHNYAVPSIIHRDIKSSNILIDATWTARVSDFGLSLMSPESDLDYRPTKAAGTVGYIDPEYYGLNVLTAKSDVYGLGVVLLELLTGKRAIFKNDENGGTPVSLVDFAVPVIMAGELAKILDPRVEPPELNETEAVELVAYTAMHCVNLEGKDRPTMADIVANLERALALCDSSHGSISSGTVSIVSD 798
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g02339 798 Gene3D - 30 192 IPR009091 -
Viun8g02339 798 FunFam serine/threonine-protein kinase-like protein CCR1 458 569 - -
Viun8g02339 798 Gene3D Transferase(Phosphotransferase) domain 1 570 787 - -
Viun8g02339 798 SUPERFAMILY Protein kinase-like (PK-like) 467 774 IPR011009 -
Viun8g02339 798 ProSitePatterns Protein kinases ATP-binding region signature. 495 517 IPR017441 GO:0005524
Viun8g02339 798 SMART serkin_6 489 778 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun8g02339 798 FunFam Serine/threonine-protein kinase-like protein CCR4 570 792 - -
Viun8g02339 798 MobiDBLite consensus disorder prediction 422 473 - -
Viun8g02339 798 SUPERFAMILY RCC1/BLIP-II 67 300 IPR009091 -
Viun8g02339 798 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN CCR4 193 784 IPR044815 GO:0004674
Viun8g02339 798 ProSiteProfiles Protein kinase domain profile. 489 778 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun8g02339 798 ProSitePatterns Serine/Threonine protein kinases active-site signature. 620 632 IPR008271 GO:0004672|GO:0006468
Viun8g02339 798 Pfam Regulator of chromosome condensation (RCC1) repeat 196 224 - -
Viun8g02339 798 MobiDBLite consensus disorder prediction 422 452 - -
Viun8g02339 798 Gene3D - 193 309 IPR009091 -
Viun8g02339 798 Pfam Protein kinase domain 490 771 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun8g02339 798 Gene3D Phosphorylase Kinase; domain 1 450 569 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g02339 Viun-Chr8 33319944 33322732 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g02339 9 798 Receptor kinase-like Gene Family AT3G55950 60.269 0.0 880
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Viun8g02339 Pkinase 5.4e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g02339 - - gmx:100798905 1274.61