Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g02337 ATGGCCAGCGTCACCTACGGCTACGGCTACAAAATGTTCAAGTACTTCAACAAAACCTACGCCCTCTCCGAGCAGACCCCTCCGCCGGACGTCAAGGACGCATTCTCCCTCTTCGCCGAAGGCGCGGACTTCATGTCCGCCGACCAGCTCCTCCGCTTTCTGCACGAACACCAACTCGAATTGGACTACACCGCAGAGGATTCCAACCGCGTCATCGAAACCTTCATGCAATCGCGGACAGAAAACGCCGAATGCGACTCCGACAACAACGGTCTAACGCTCGACGAGTTCTTCCGCTTCTTGTTCCTCGTCGATTTCAACGATGCCCTCAAATCTAAGGTACATCAAGATATGAATGCTCCGTTGTCACATTATTTCATATATACAGGGCACAATTCTTATCTGACTGGGAATCAGCTGAGCAGCGATTGCAGTGATGTGCCAATAATAAAGGCTTTGCAACTAGGTGTGCGAGTAATTGAACTAGATTTATGGCCAAATTCAACTAGAGATGATATCGACGTCGTTCATGGAAGGACACTTACTGCTCCTGTCTCACTTATCCAGTGTTTGAAGTCCATAAAAGAGTATGCTTTTGTTAAATCTGAGTACCCACTAATTATAACTTTAGAAGACCACCTTACACCACCTCTTCAAGCTAAAGTTGCAGAGATGGTAGCTCAAGTATTTGGAGATATGCTATACTACCCTGAGACGGATCTTCTCACAGAATTTCCCACACCAGAGTCGGTGAAAGGTCGAATTCTTATATCAACCAAACCACCAAAAGAATATCTTGAATCCAAGCAATTCAAGGATAGTGACAGTGAGAGGGAATCAACTGAAGAATTATCGCCATGCATTATCCCTGAATTGGAAGCTGCTGCTGCTGCTGCTGTTGCAGCTGCTGAGAAGCCCAATGGAAATGATCTTGATGAGGAAAGCTTGAATGCCCGTGATAAAAAACCAGACCAGCAGGGTGCACCAGAGTACAAACGTTTAATTACAATCCATGCTGGGAAGCCAAAGGGTCCTGTAAAGGATCACTTAAATGTTGTTGGGGGTGTAAAGCGCTTGAGCTTGAGCGAGCAGGAACTTGAAAGAGCTTCTACCACTTATGGATCTGATATTGTTAGGTTTACACAGAAGAATATTATCAGGGTGTATCCAAAGGGAACACGTGTTAACTCCTCAAATTACAGGCCACATATAGGATGGATTTACGGAGCTCAGATGGTGGCATTTAACATGCAGGGGCATGGAAAATCACTCTGGTTTATGCAAGGAATGTTTAGATCGAATGGCGGCTGTGGTTATGTGAAAAAACCTTCATTTCTGATAGAACAAGGCCCAGATGATGAGGTTTTTGATCCTAAAAAACCAATGCCAGTGCAAAAGACATTGACGGTAAAAGTGTACATGGGAAACGGGTGGAGCACAGATTTCAGTAAAACACACTTCGATGCATTCTCTCCGCCGGACTTTTACACAAAGGTTTGCATTGTTGGAGTACCTGCTGATAACATGAATAAGAAGACCAGGATAATTCAAGATGATTGGTTTCCCGTTTGGGATGAAGAGTTTGAATTTCCTTTGTGTGTTCCAGAACTAGCTTTACTCTGGATAGAGGTTCGAGAGTACGATAAGCATGAAAAGGATGACTTTGGCGGCCAATCATGTTTACCAATCTCTGAGCTAAGATCTGGTTTCCGGGTAGTCCCTCTATTTGATGAGAAGGGCGAGCAATTAAAATCTGTAAAGCTTTTAATGCGGTTTCAGTTCAAATAA 1788 0.443 MASVTYGYGYKMFKYFNKTYALSEQTPPPDVKDAFSLFAEGADFMSADQLLRFLHEHQLELDYTAEDSNRVIETFMQSRTENAECDSDNNGLTLDEFFRFLFLVDFNDALKSKVHQDMNAPLSHYFIYTGHNSYLTGNQLSSDCSDVPIIKALQLGVRVIELDLWPNSTRDDIDVVHGRTLTAPVSLIQCLKSIKEYAFVKSEYPLIITLEDHLTPPLQAKVAEMVAQVFGDMLYYPETDLLTEFPTPESVKGRILISTKPPKEYLESKQFKDSDSERESTEELSPCIIPELEAAAAAAVAAAEKPNGNDLDEESLNARDKKPDQQGAPEYKRLITIHAGKPKGPVKDHLNVVGGVKRLSLSEQELERASTTYGSDIVRFTQKNIIRVYPKGTRVNSSNYRPHIGWIYGAQMVAFNMQGHGKSLWFMQGMFRSNGGCGYVKKPSFLIEQGPDDEVFDPKKPMPVQKTLTVKVYMGNGWSTDFSKTHFDAFSPPDFYTKVCIVGVPADNMNKKTRIIQDDWFPVWDEEFEFPLCVPELALLWIEVREYDKHEKDDFGGQSCLPISELRSGFRVVPLFDEKGEQLKSVKLLMRFQFK 595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g02337 595 SMART C2_3c 467 575 IPR000008 -
Viun8g02337 595 ProSiteProfiles Phosphatidylinositol-specific phospholipase Y-box domain profile. 360 446 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Viun8g02337 595 Pfam Phosphatidylinositol-specific phospholipase C, X domain 118 260 IPR000909 -
Viun8g02337 595 ProSiteProfiles C2 domain profile. 448 577 IPR000008 -
Viun8g02337 595 ProSiteProfiles Phosphatidylinositol-specific phospholipase X-box domain profile. 116 260 - -
Viun8g02337 595 SUPERFAMILY PLC-like phosphodiesterases 116 448 IPR017946 GO:0006629|GO:0008081
Viun8g02337 595 Gene3D Phosphatidylinositol (PI) phosphodiesterase 114 459 IPR017946 GO:0006629|GO:0008081
Viun8g02337 595 PRINTS Phospholipase C signature 244 261 IPR001192 GO:0035556
Viun8g02337 595 PRINTS Phospholipase C signature 385 406 IPR001192 GO:0035556
Viun8g02337 595 PRINTS Phospholipase C signature 406 424 IPR001192 GO:0035556
Viun8g02337 595 PRINTS Phospholipase C signature 121 139 IPR001192 GO:0035556
Viun8g02337 595 PRINTS Phospholipase C signature 561 571 IPR001192 GO:0035556
Viun8g02337 595 PRINTS Phospholipase C signature 147 167 IPR001192 GO:0035556
Viun8g02337 595 SMART plcy_3 331 447 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Viun8g02337 595 SMART plcx_3 116 260 IPR000909 -
Viun8g02337 595 Pfam Phosphatidylinositol-specific phospholipase C, Y domain 359 445 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Viun8g02337 595 Gene3D C2 domain 461 595 IPR035892 -
Viun8g02337 595 PANTHER PHOSPHOINOSITIDE-SPECIFIC PHOSPHOLIPASE C FAMILY PROTEIN 13 594 IPR001192 GO:0035556
Viun8g02337 595 Pfam Phosphoinositide-specific phospholipase C, efhand-like 29 102 IPR015359 -
Viun8g02337 595 MobiDBLite consensus disorder prediction 299 328 - -
Viun8g02337 595 SUPERFAMILY EF-hand 19 118 IPR011992 -
Viun8g02337 595 FunFam Phosphoinositide phospholipase C 462 595 - -
Viun8g02337 595 MobiDBLite consensus disorder prediction 307 328 - -
Viun8g02337 595 Pfam C2 domain 467 569 IPR000008 -
Viun8g02337 595 Gene3D - 24 113 - -
Viun8g02337 595 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 467 594 IPR035892 -
Viun8g02337 595 CDD C2_PLC_like 466 595 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g02337 Viun-Chr8 33296058 33301449 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g02337 7 595 Acyl Lipid Metabolism Gene Families AT2G40116 59.211 0.0 730
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g02337 K05857 - gmx:100777010 983.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun1g03216 1 40027378 40035311 Viun8g02337 8 33296058 33301449 ECH
Viun8g01791 8 28771294 28782553 Viun8g02337 8 33296058 33301449 ECH
Viun8g02337 8 33296058 33301449 Viun8g02337 8 33296058 33301449 ECH
Viun1g03216 1 40027378 40035311 Viun8g02337 8 33296058 33301449 PCT