LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Viun8g02327	ATGGCGGGGAAACTGGCAAAGGCAGCTTATGATGCAAAGATGTTGAAGCTTCTGAGAGAGTACAGTCAGGTACTGGTGGTTTCATCTGACAATGTGGGTTCAAACCAGCTTCAGGGGATACGGAGGGGACTCCATGCTGATTCAGTTGTGGTGATGGGAAAGAACTCCCTGATGAAACGCTCTATCATCTTGGATGCTCAAAAGACTGGCAACAAGGCCTTCCTTAACCTTGTCCCCCTTCTTGTGGGAAATGTGGCATTAATTTTCACCAAAGGTGACATAAGGGAGGTCAGCGAACAGATTTCCAAGCACAAGGTTGTTCAACCGATTCTAATGTGCCCGAAGTATATGTCACATGACACATACCACAATTGTTCCTATATGCAATCTGGACAGTTACCTTTGGGCCTCACATGTTGTAATCAGCAACAGTCATCGCAGGTTTCTGAGCCTTTTCTTGTATGCTCAAAATTCCAGCCACACCAACATTGTTTCATGATGAGATCAAGACAGTTCTTGATGACAAGTATATGGTCTCCTCTTCTCCTTTTGGCTGGAAACTTGTGA	567	0.4497	MAGKLAKAAYDAKMLKLLREYSQVLVVSSDNVGSNQLQGIRRGLHADSVVVMGKNSLMKRSIILDAQKTGNKAFLNLVPLLVGNVALIFTKGDIREVSEQISKHKVVQPILMCPKYMSHDTYHNCSYMQSGQLPLGLTCCNQQQSSQVSEPFLVCSKFQPHQHCFMMRSRQFLMTSIWSPLLLLAGNL	188

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Viun8g02327	188	Gene3D	-	4	135	IPR043141	-
	Viun8g02327	188	Pfam	Ribosomal protein L10	6	104	IPR001790	-
	Viun8g02327	188	SUPERFAMILY	Ribosomal protein L10-like	7	104	IPR043141	-
	Viun8g02327	188	PANTHER	60S ACIDIC RIBOSOMAL PROTEIN P0	6	139	-	-
	Viun8g02327	188	FunFam	60S acidic ribosomal protein P0	4	135	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Viun8g02327	Viun-Chr8	33276759	33280286	Dispersed/Tandem

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Viun8g02327	7	109	Cytoplasmic Ribosomal Protein Gene Family	AT2G40010	65.049	3.17e-43	145

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Viun8g02327	K02941		-	mnt:21409050	154.836

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