Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g02321 ATGTGCAAAACAATGGCTGTAATTCTATTCATGTTCATTCTCAGTGTTGTTTCACAGAACTTAGTGTACATGATGCCACCTACAGTTGCTCTCTCTTTGAGTTCAGAGAGTGACAAGCTGGCTTTACTTGCTTTGAAGCATGAGCTTACCAATGGAGTCGCCAATGCTCTTCCATCGTGGAATAACTCTTTACATTTCTGTGAGTGGCAGGGTGTTACATGCGGACACCGCCACATGAGAGTCTCTGTCTTGCACTTGGAAAATGAAAACTGGGGTGGCACTCTTGGACCATCTTTGGGAAATCTAAGCTTCCTCACAACCCTCATTCTTTCCAACATCAACTTGCATGGGGAAATTCCCACACAAATTGGTCGACTAAAGAGATTGCAGGTTCTTGACTTGAGCCACAACGGTCTAAATGGTCAGATTCCTGTACACCTTTCTAACTGCACTAAACTTGAGATGATTAACTTGTTGTACAATAAACTCACAGGAAAAGTTCCCTCCTGGTTTGGAAGTGGATCCATGACACGGCTAAATAAGTTGCTTCTTGGTGTCAACGATCTAGTTGGTACTATCCCACCTTCCTTGGGGAATCTATCATCCCTTCAAAATATTTTCCTTGCAAGAAATCATTTGGTGGGAAGTATACCACATGTTTTGGGTCGGTTATCAAATTTAAAAATCGTGAATCTGGCTTTAAATAGTTTGTCAGGAGTAGTCCCTGATTCTCTTTATAATCTTTCTAATATTCAAATTCTTGCTCTCGCGAACAACCAGTTATCAGGTATTCTTCCATCAAAAATGCAACTTGGTTTTCCAAACCTTCAAGCCTTTTTGTTTGGAGCGAACCAGTTCAGTGGAACATTCCCGTCTTCAGTATCCAACATCACCGGATTGCAAGCGTTTGATATCTCCTACAATGGTTTTAGTGGGCCAATTCCTCCCACTTTCGGAAGCTTAAATAAACTTCAAATGCTTAACCTTTGTTACAATAGTTTTGGAAGTGGGAGAGCTCGTGACTTGGATTTCCTTTTGTCATTAACAAATTGTACTCATTTGCGCATACTTCATTTGGATGGAAATGGATTTGGTGGTGCAGTGCCAGGTCTTATCGGCAATTTTTCTACCTATCTGAGTATTCTTACTATGGGGTTGAATCAAATATCTGGAACGATACCTGAAGGAATTTGGCAGCTAATCGGTTTAACCGACATAGACATGGGAGAAAATTATCTACAGGGAACTATTCCGGATTCAATTGGAAGGCTCAAAAATCTAGTAGGACTGGACCTAGAAGAAAACAAATTGTCTGGTAATATTCCTACCGCCATTGGCAATCTCACTATATTGTCTGAACTTTCTCTGCATTCAAATAGTTTTGTTGGTGGCATTCCATTAAGCCTCAAATACTGCACGCGACTGGAGAGATTTAGTGTTTCGACCAACAATTTAAATGGAGATATCCCTAATCAAACATTTGGCAATTTTGAAGGTTTGGTAAAACTCGACTTATCTTACAATTCTTTCACTGGTTCCATCCCTTCAGAGTTTGAAAACTTGAAGCACCTTTCCGTATTATATCTTCAGGTAAACAAATTTTCTGGTGAAATACCTGAAGAGCTTGGCGCTTGTTCCGGGTTAACAAAACTTGTGTTACAGAGTAACTTCTTCCGGGGAAGCATACCTTCGTTTTTGGGCTCTTTAGGATCCCTTGAATTCCTAGACCTTTCGAACAACAACTTCTCATGCACAATCCCTGTTGAACTACAAAAGTTGAGTTATTTGAATACTTTGAACTTGTCTTTTAACCATCTTTATGGTGAGGTTCCCACCGGAGGTGTCTTTAACAATGTTACAGCAATTTCACTCATTGGAAATAAGGATCTGTGTGGAGGGATACCTCAACTGAAGCTTCCTGCATGTTCTAAGTTGCCCTCAAACAAACACAAGTGGTCTTTCAGAAAGAAACCCATCCTTATCATTGCAATTGTCGTTGGAGTGGGTTTGATAACTTCAACACTGTTTATCAGCATCTATCTGATCAGGAAAAGTCCCAAAACACAATCGACTTCTTGGTCTCCTGAAAAAAAGTACGTAAAGGTTTCTTATGGAGATCTGCATAAAGCAACCGATGGATTTTCTTCATCCAATTTGGTAGGTTCTGGAAGCTTTGGTTCTGTATATAGTGGATATCTTCTCCCTTTCAAAACACCCGTTGCTGTGAAGGTATTGAATCTTGAAAAGTGTGGAGCGTCAAAAAGTTTCGTAGCTGAGTGCAAGGTTGTAGGAATGATAATGCATCGGAATCTTGTCAACATCTTGACTTGTTGTTCAAGTATTGATTATAACGGTAAAGATTTCAAGGCTATAGTTTTTGAATTCATGCCTAATGGCAGTCTAGAAAGTTTGCTGTACGACAACGTTGAGCCCGATACTAGAAGTTTCAGTGTCAACCTTGATCTTGTGGTAAATATTGCTCTTGATGTTGCTAATGCATTGGATTATCTTCATCATGGTTCTTCGCAAGCTGTGGTTCACTGTGATATTAAGCCAAGCAACGTTCTTCTTGATGATGCCATTGTTGCTCACTTGGGAGATTTTGGGTTAGCAAGGCTCCTTCATGTGGCGACGGGACATTCCAGCAGAGATGAGGTTAGTTCGTCTGCAATTAGAGGAACCATTGGATATGTTCCACCAGAATACGGAGCAGGGCGTGGAGTATCAACTAAAGGAGATATGTACAGTTACGGAATTGTTGTGCTGGAGATGGTGACAGGAAGGAAACCAACAGATGCAATGTTTGGTGAGGGTTTAAGCCTACACAAATTCTGCCAAATGGCAATTCCAGAAGGAATGAGTGAGATAGCAGATTCACGTTTGGTTGCGGCAACTGGTGAAGAAGGAAGAAGGATGATGGAAAGCAAAATTAGGGAGTGTTTGGTGGGCTTAGCTAGGATTGGAGTTGGATGTTCTGCAGAATTACCTTCTGAGCGAATGGACATAAAAGATGTGGTACTGGAGATGCACTCAATCAAACAGAGGCTCTGTCACTAA 3057 0.4086 MCKTMAVILFMFILSVVSQNLVYMMPPTVALSLSSESDKLALLALKHELTNGVANALPSWNNSLHFCEWQGVTCGHRHMRVSVLHLENENWGGTLGPSLGNLSFLTTLILSNINLHGEIPTQIGRLKRLQVLDLSHNGLNGQIPVHLSNCTKLEMINLLYNKLTGKVPSWFGSGSMTRLNKLLLGVNDLVGTIPPSLGNLSSLQNIFLARNHLVGSIPHVLGRLSNLKIVNLALNSLSGVVPDSLYNLSNIQILALANNQLSGILPSKMQLGFPNLQAFLFGANQFSGTFPSSVSNITGLQAFDISYNGFSGPIPPTFGSLNKLQMLNLCYNSFGSGRARDLDFLLSLTNCTHLRILHLDGNGFGGAVPGLIGNFSTYLSILTMGLNQISGTIPEGIWQLIGLTDIDMGENYLQGTIPDSIGRLKNLVGLDLEENKLSGNIPTAIGNLTILSELSLHSNSFVGGIPLSLKYCTRLERFSVSTNNLNGDIPNQTFGNFEGLVKLDLSYNSFTGSIPSEFENLKHLSVLYLQVNKFSGEIPEELGACSGLTKLVLQSNFFRGSIPSFLGSLGSLEFLDLSNNNFSCTIPVELQKLSYLNTLNLSFNHLYGEVPTGGVFNNVTAISLIGNKDLCGGIPQLKLPACSKLPSNKHKWSFRKKPILIIAIVVGVGLITSTLFISIYLIRKSPKTQSTSWSPEKKYVKVSYGDLHKATDGFSSSNLVGSGSFGSVYSGYLLPFKTPVAVKVLNLEKCGASKSFVAECKVVGMIMHRNLVNILTCCSSIDYNGKDFKAIVFEFMPNGSLESLLYDNVEPDTRSFSVNLDLVVNIALDVANALDYLHHGSSQAVVHCDIKPSNVLLDDAIVAHLGDFGLARLLHVATGHSSRDEVSSSAIRGTIGYVPPEYGAGRGVSTKGDMYSYGIVVLEMVTGRKPTDAMFGEGLSLHKFCQMAIPEGMSEIADSRLVAATGEEGRRMMESKIRECLVGLARIGVGCSAELPSERMDIKDVVLEMHSIKQRLCH 1018
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g02321 1018 Gene3D Ribonuclease Inhibitor 341 651 IPR032675 -
Viun8g02321 1018 Gene3D Phosphorylase Kinase; domain 1 678 795 - -
Viun8g02321 1018 ProSiteProfiles Protein kinase domain profile. 714 1018 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun8g02321 1018 Pfam Leucine rich repeat 474 533 IPR001611 GO:0005515
Viun8g02321 1018 Pfam Leucine rich repeat 202 261 IPR001611 GO:0005515
Viun8g02321 1018 Pfam Leucine rich repeat 547 606 IPR001611 GO:0005515
Viun8g02321 1018 Pfam Leucine rich repeat N-terminal domain 36 74 IPR013210 -
Viun8g02321 1018 SUPERFAMILY L domain-like 35 334 - -
Viun8g02321 1018 Gene3D Transferase(Phosphotransferase) domain 1 796 1017 - -
Viun8g02321 1018 SMART serkin_6 714 1013 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun8g02321 1018 Pfam Leucine Rich Repeat 128 150 IPR001611 GO:0005515
Viun8g02321 1018 SUPERFAMILY Protein kinase-like (PK-like) 687 1007 IPR011009 -
Viun8g02321 1018 Gene3D Ribonuclease Inhibitor 34 173 IPR032675 -
Viun8g02321 1018 SUPERFAMILY L domain-like 377 632 - -
Viun8g02321 1018 FunFam LRR receptor-like serine/threonine-protein kinase EFR 341 648 - -
Viun8g02321 1018 SMART LRR_typ_2 521 545 IPR003591 -
Viun8g02321 1018 SMART LRR_typ_2 497 520 IPR003591 -
Viun8g02321 1018 SMART LRR_typ_2 126 150 IPR003591 -
Viun8g02321 1018 SMART LRR_typ_2 593 618 IPR003591 -
Viun8g02321 1018 SMART LRR_typ_2 248 271 IPR003591 -
Viun8g02321 1018 SMART LRR_typ_2 569 592 IPR003591 -
Viun8g02321 1018 SMART LRR_typ_2 424 448 IPR003591 -
Viun8g02321 1018 SMART LRR_typ_2 224 247 IPR003591 -
Viun8g02321 1018 Pfam Protein kinase domain 716 946 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun8g02321 1018 ProSitePatterns Protein kinases ATP-binding region signature. 720 743 IPR017441 GO:0005524
Viun8g02321 1018 ProSitePatterns Serine/Threonine protein kinases active-site signature. 845 857 IPR008271 GO:0004672|GO:0006468
Viun8g02321 1018 PANTHER UNNAMED PRODUCT 11 112 - -
Viun8g02321 1018 FunFam LRR receptor-like serine/threonine-protein kinase EFR 685 795 - -
Viun8g02321 1018 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 796 1018 - -
Viun8g02321 1018 Gene3D Ribonuclease Inhibitor 174 340 IPR032675 -
Viun8g02321 1018 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 75 340 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g02321 Viun-Chr8 33236061 33239395 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g02321 33 1016 Receptor kinase-like Gene Family AT3G47570 43.706 0.0 750
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Viun8g02321 Pkinase 1.3e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g02321 - - gmx:100777490 1478.77