Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g02320 ATGTGCAAAACAATGGCTGTAATTCTATTCATGTTCATTCTCAGTGTTGTTTCACAGAACTTACTGTACATGATGCCACCTACAGTTGCTCTCTCTTTGAGTTCAGAGAGTGACAAGCTGGCTTTACTTGCTTTGAAGCATGAGCTTACCAATGGAGTCGCCAATGCTCTTCCATCGTGGAATAACTCTTTACATTTCTGTGAGTGGCAGGGTGTTACATGCGGACATCGCCACATGAGAGTCTCTGTCTCGCACTTGGAAAATCAAACATGGGGTGGCACTCTTGGACCATCTTTGGGAAATCTAAGCTTCCTCACAACCCTCATTCTTTACAACATCAACTTGTATGGGGAAATTCCCACACAAATTGGACAACTAAAGAGGTTGCAGCTTCTTGATTTGAGCCTCAACAACCTAAATGGTCAGATTCCTATACACCTTACCAACTGCTCTAAACTTGAGGCCATTGGCTTGTTGGAAAATAAACTCACTGGAAAAGTTCCCTCCTGGTTTGGAAGTGGATCCATGACACGGCTAAAAACGTTGTTTCTTGGTACCAATGATCTAGTTGGTACCATCCCACCTTCCTTGGGGAATCTTTCATCCCTTCAATATATCTCAGTTAAAGGAAATCATTTGGTGGGAAGTATACCACATGTTTTGGGTCAATTATCAAATTTGAAAAGACTGGATCTTGGTTTAAATAGTTTGTCAGGAGTAGTCCCTTATTCTCTTTATAATCTTTCCAGTATTCAAAGTTTTGCTCTCGATGCAAACCAGTTATCTGGGACTTTTCCGTCAAAAATGCAACTTGTTTTTCCAAACCTTAGAGCATTCTTGGTTGGAGGGAACCAGTTCAATGGAACTTTCCCGTCTTCAGTATTCAACATCACTGGATTGGAAAGGTTTGATATCTCCTCGAATGGTTTTAGTGGCTCAATTCCTCCCACTCTGGGAACCTTAAATAAACTTCAGCTGTTTCACATTGCTTACAATAGTTTTGGAAGTGGGAGGGCTCGTGATTTGGATTTCCTTTCATCATTTACAAATTGTACTCATTTGCGCATACTTATTTTGGATGGCAATGGATTTGGTGGTGAGGTGCCACGTCTTATCGGCAATTTTTCTACCAACCTGAATATTCTTAGTACGGGGTCGAATCAAATATCTGGAACGATACCTGAAGGAATTTGGCAGCTAATCAGTTTGGCCGATATCACCATGGAAAATAATTATCTAGTGGGAACTGTTCCAGATTCAATTGTAAGGCTTAAAAATCTAGTACGATTAAACCTAGGAGAAAACAAATTGTCTGGTAATATTCCTACTGCCATTGGCAATCTTACTATGCTGTCTGAACTTTATCTGTACAGAAACAGATTCGTTGGACACATTCCATTAAGCCTTAAATACTGCATGCGAATGCAGTCAATTGGTGTTTCCACCAACAACTTGAATGGGGATATCCCTAATCAAACCTTTGGCAATTTGGAAGATTTGACAAAGCTTGACTTATCCTACCATTCTTTCACTGGTTCCATCCCTTCAGACTTTGGAAACTTGAAGCACCTTTCCGGTTTGTATCTTCGTGGAAACAAATTGTCTGGTGAATTACCCCAAGAGCTTGGCGCTTGTTACGGGTTAACAGAGCTTGCATTGGAGAGTAACTTCTTCCGCGGAAGCATACCGTCGTTCTTGGGCTCTTTAGGATCCCTTGAATTCCTAGACCTTTCTAACAATAACTTCTCAAGCACAATCCCTGTTGAACTACAAAAGTTGAGTTATTTGAATACTTTGAACTTGTCTTTTAACCATCTTTGTGGTGAGGTTCCCACAGGAGGTGTCTTTAATAATGTTACAGCAATTTCACTCATTGGAAATAAGGATCTCTGTGGTGGCATACCTCAACTGAAGCTTCCTGCATGCTCTAAGTTGTCCTCAAAGAAACACAAGTGGTCTTTTAAAACGAAACTCATCCTCATCATTGCAATTGTCGTTGGAGTGGGTGTGGTTACTTCAACACTGTTTATCAGCATCTATTTGTTCAGAAAAAGGCCCATAACACCCAAAACACCATCGACTTCATGTTCTCGTAAAAACAAGTACGTGAAGGTTTCTTATGGAGATCTGCATAAAGCAACCAATGGATTTTCTTCATCCAATTTGGTAGGTTCGGGAGGCTTTGGTTCTGTATATAGTGGATCTCTTCTCCCTTTCGAAACACCTATTGCTGTGAAGGTATTGAATCTTGAAAGAGGTGGTGCATCAAAGAGTTTCGCAGCTGAGTGCAAGGCTCTAGGAAGGATCATGCATCGGAATCTTGTCAACATCTTGACTTGTTGTTCAAGTATTGATTATAACGGTAAAGATTTCAAGGCTATAGTTTTCGAGTTCATGCCTAATGGCACTCTAGAAAGTTTGCTGCACGACAAAGTAGAGCCCAAATCTAAAAATTTGAGTCTCAACCTTGATCTTGTGGTAAATATTGCTCTTGACGTTGCTAATGCATTGGATTATCTTCATCATGATTCTGAGGAAGCTGTGGTTCACTGTGATATTAAGCCAAGCAACGTTCTTCTTGATGATGACATGGTTGCTCACTTGGGTGATTTTGGGTTAGCAAGACTCCTTCATGTGGCGACGGGACATTCCAGCAGAGATGAGGTTAGTTCCTCTGCAATTAGAGGAACCTTTGGATATATTCCACCAGAGTACGGAACAGGTTGCCGAGTATCAGCTAAAGGAGATATGTACAGTTACGGAATTCTTGTGCTGGAGATGCTGACAGGAAGGAAACCAACAGATTCAATGTTTGGTGAGGGTGTAAGCCTACACAAATTCTGCGAAATGGCAATTCCAGAAGGAATCACTGAGATAGTAGATTCACGTTTGCTTGTGCCAACTGCTGCAGAAGGAAGAAAGGTTATGGAAAGCAAAATTAGGGAGTATTTGGTTGCTTTAGCTAGGATTGGAGTTGGATGTTCTGCAGAATTACCTGTTGAGCGAATGGACATGAAAGATGTGGTATTGGAGCTGCACACAATCAAACAGAGTCTGTCACTGACTCATTAG 3072 0.4111 MCKTMAVILFMFILSVVSQNLLYMMPPTVALSLSSESDKLALLALKHELTNGVANALPSWNNSLHFCEWQGVTCGHRHMRVSVSHLENQTWGGTLGPSLGNLSFLTTLILYNINLYGEIPTQIGQLKRLQLLDLSLNNLNGQIPIHLTNCSKLEAIGLLENKLTGKVPSWFGSGSMTRLKTLFLGTNDLVGTIPPSLGNLSSLQYISVKGNHLVGSIPHVLGQLSNLKRLDLGLNSLSGVVPYSLYNLSSIQSFALDANQLSGTFPSKMQLVFPNLRAFLVGGNQFNGTFPSSVFNITGLERFDISSNGFSGSIPPTLGTLNKLQLFHIAYNSFGSGRARDLDFLSSFTNCTHLRILILDGNGFGGEVPRLIGNFSTNLNILSTGSNQISGTIPEGIWQLISLADITMENNYLVGTVPDSIVRLKNLVRLNLGENKLSGNIPTAIGNLTMLSELYLYRNRFVGHIPLSLKYCMRMQSIGVSTNNLNGDIPNQTFGNLEDLTKLDLSYHSFTGSIPSDFGNLKHLSGLYLRGNKLSGELPQELGACYGLTELALESNFFRGSIPSFLGSLGSLEFLDLSNNNFSSTIPVELQKLSYLNTLNLSFNHLCGEVPTGGVFNNVTAISLIGNKDLCGGIPQLKLPACSKLSSKKHKWSFKTKLILIIAIVVGVGVVTSTLFISIYLFRKRPITPKTPSTSCSRKNKYVKVSYGDLHKATNGFSSSNLVGSGGFGSVYSGSLLPFETPIAVKVLNLERGGASKSFAAECKALGRIMHRNLVNILTCCSSIDYNGKDFKAIVFEFMPNGTLESLLHDKVEPKSKNLSLNLDLVVNIALDVANALDYLHHDSEEAVVHCDIKPSNVLLDDDMVAHLGDFGLARLLHVATGHSSRDEVSSSAIRGTFGYIPPEYGTGCRVSAKGDMYSYGILVLEMLTGRKPTDSMFGEGVSLHKFCEMAIPEGITEIVDSRLLVPTAAEGRKVMESKIREYLVALARIGVGCSAELPVERMDMKDVVLELHTIKQSLSLTH 1023
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g02320 1023 PANTHER OS04G0122200 PROTEIN 110 219 - -
Viun8g02320 1023 SUPERFAMILY Protein kinase-like (PK-like) 694 1012 IPR011009 -
Viun8g02320 1023 Gene3D Ribonuclease Inhibitor 35 173 IPR032675 -
Viun8g02320 1023 Gene3D Phosphorylase Kinase; domain 1 682 798 - -
Viun8g02320 1023 Pfam Protein kinase domain 719 941 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun8g02320 1023 Gene3D Transferase(Phosphotransferase) domain 1 799 1022 - -
Viun8g02320 1023 ProSitePatterns Serine/Threonine protein kinases active-site signature. 848 860 IPR008271 GO:0004672|GO:0006468
Viun8g02320 1023 SUPERFAMILY L domain-like 61 372 - -
Viun8g02320 1023 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 76 342 - -
Viun8g02320 1023 SUPERFAMILY RNI-like 273 612 - -
Viun8g02320 1023 ProSitePatterns Protein kinases ATP-binding region signature. 723 746 IPR017441 GO:0005524
Viun8g02320 1023 Pfam Leucine rich repeat N-terminal domain 36 74 IPR013210 -
Viun8g02320 1023 ProSiteProfiles Leucine-rich repeat profile. 571 592 IPR001611 GO:0005515
Viun8g02320 1023 FunFam LRR receptor-like serine/threonine-protein kinase EFR 689 798 - -
Viun8g02320 1023 Gene3D Ribonuclease Inhibitor 174 338 IPR032675 -
Viun8g02320 1023 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 799 1023 - -
Viun8g02320 1023 Pfam Leucine rich repeat 476 534 IPR001611 GO:0005515
Viun8g02320 1023 Pfam Leucine rich repeat 403 461 IPR001611 GO:0005515
Viun8g02320 1023 ProSiteProfiles Protein kinase domain profile. 717 1016 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun8g02320 1023 SMART serkin_6 717 984 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun8g02320 1023 FunFam LRR receptor-like serine/threonine-protein kinase EFR 343 648 - -
Viun8g02320 1023 SMART LRR_typ_2 521 545 IPR003591 -
Viun8g02320 1023 SMART LRR_typ_2 593 618 IPR003591 -
Viun8g02320 1023 SMART LRR_typ_2 224 247 IPR003591 -
Viun8g02320 1023 SMART LRR_typ_2 176 200 IPR003591 -
Viun8g02320 1023 SMART LRR_typ_2 569 592 IPR003591 -
Viun8g02320 1023 SMART LRR_typ_2 424 448 IPR003591 -
Viun8g02320 1023 SMART LRR_typ_2 126 150 IPR003591 -
Viun8g02320 1023 Gene3D Ribonuclease Inhibitor 339 651 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g02320 Viun-Chr8 33226784 33230281 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g02320 33 1017 Receptor kinase-like Gene Family AT3G47570 44.209 0.0 765
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Viun8g02320 Pkinase 9.5e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g02320 - - gmx:100777490 1443.33