Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g02319 ATGGCTGTAATTCTATTCATGTTTCTTCTCAGTGTTGTTTCACAGAACTTAGTGTACATGATGCCACCTACAGTTGGTCTCTCTTTGAGTTCAGAGAGTGACAAGCTGGCTTTACTTGCTTTGAAGCTTACCAATGGAGTCGCCAATGCTCTTCCATCATGGAACAACTCTCTGCATTTCTGTGAGTGGCAGGGTGTTACATGCGGACATCGCCATATGAGAGTCTCTGTCTTGCACTTGCAAAATCAAAACTGGGGTGGCACTCTTGGACCATCTTTGGGAAATCTAACCTTCCTCACAACCCTCATTCTTTCCAACATCAACATGCATGGGGAAATTCCCACACAAATTGGTCGACTAAAGAGGTTGCAGGTTCTTCACTTGAGCCACTACAGTCTAAATGGTCAGATTCCTGTGCACCTTTCTAACTGCTCTAAACTTGAGGTCATTAACTTGTTGTACAACAAACTCAATGGAAAACTTCCCTCCTCGTTCGGACTTGGATCCATGACACGGCTTAATAAGTTGCTTCTTGGTGCCAATGATCTAGTCGGTACTGTCCCACCTTCCTTGGGAAATCTTTCATTGCTCCAAAATATCACAGTGGCAAGAAATCATTTGGTGGGAAGTATACCACATGTTTTGGGCCGATTGTCAAATTTGAAGGAGCTGAATCTTGGTTTAAATAATCTGTCAGGAGTAGTGCCTGATTCTCTTTATAACCTTTCCAATATTCAAATTTTTGTTCTCGGGGTAAACCGGTTATCTGGTACTCTTCCATCAAAAATGCAACTTGCTTTTCCAAACCTTAGAGCATTCTTTGTTGGAGATAACCAGTTGAATGGAGCTTTCCCGTCTTCAATATCCAACATCACCGGATTGCAAGCGTTTGATATCTCCTTAAATGGTTTCAGTGGGCCAATTCCTCCCACTTTGGGAAGCTTAAACAAACTCGAGACGTTTAGCATTTTGGATAATAGATTTGGAAGTGGGAGCGCTCAAGATTTAGATTTCCTTTCCTCTTTAACCAATTGTACTCAATTGAAGATACTTCTTTTGGGTTGGAATGAATTTGGTGGTGTGTTTCCAGATCTTATTGGCAATTTTTCTACCAATCTCACTTCGCTCAGTATGGAGTGCAATCAAATAACTGGAAAGATACCTGAAGGAATTGGACAGCTAATTGGTTTAACTAGCTTTGTCGTGCCTAATAATTATCTTGAGGGAAGCATTCCAGATTCAATTGGAAAGCTAAAAAATCTAGTAAGATTAGTCCTGCAAGAAAACAAACTGTCTGGTAATATTCCTACAGCCATTGGCAATCTTACCATGTTGTCTGAACTTTATCTGCACACAAATAGATTGGTTGGAGGCATTCCATTGAGCCTCAAATACTGCACGCGAATGCAGTCATTTGGTGTTTCCTCCAACAACTTGAGTGGAGATATCCCTAATCAAACATTTGGCAATCTAGAAGGTTTGATAAATCTTGACTTATCCAACAACTCTTTCACCGGTTCCATTCCTTTAGAGATTGGAAACTTGACGCACCTTTCCGTACTATATCTAAACGAAAACAAGTTGTCTGGTGAAATTCCTGCCAAACTTGCGGCTTGTTCCGCATTAACAGAACTCATGTTGCAGATAAACTTTTTCCGAGGAAGCATACCTTCGTTCTTTGGCTCTTTAGGATCCCTGGAAATCCTAGACCTTTCTAACAACAACTTCTCAAGCACAATCCCTGTTGAACTACAAAATCTGACTTTTTTGCATGCTTTGAACTTGTCTTTTAACCATCTTTATGGTGAGGTTCCTATAGGAGGAGTCTTTAATAATGTTACAGTAATTTCACTCATTGGAAATAAGGATCTCTGTGGTGGGATACCTCAACTGAACCTTCCTGCATGCTCTAAGTTGCCCTCAAAGAAACGCAAGTGGACGTGTAGAAAGAAACTCATCCTCATCATTGCAATTGAAGTTGGAGTGTATTTGGTTGCTTTTACAGTGTTTATCAGCATCTATTTGTTCAGGAAAAGGCCCAAAACACCATCGACTTCATGTTCTCCTGAAAATGAGTACGTAAAGGTTTCTTATGGAGATCTGCATAAAGCAACCAATGGATTTTCTTCATCCAATTTGGTTGGTTCTGGAGGCTTTGGTTCTGTATATAATGGATATCTTCTCCCTTTCCAAACACCTGTTGCTGTGAAGGTATTGAATCTTGAAACAGTTGGGGCGTCAAAGAGCTTCGCAGCTGAGTGCAAGGCTCTAGGAAGGATCATGCATCGGAATCTTCTCAACATCTTGACTTGTTGTTCAAGTATTGATTATAACGGTAAAGATTTCAAGGCTATAGTTCTCGAGTTCATGCCTAATGGATGTCTAGAAAGTTTGCTGCACGACAAAGTAGAGCCCAAATCTAGAAATTTCAACCTCGACCTTGATCTTGTGGTAAATATTGCTCTTGACGTTGCTAATGCATTGGATTATCTTCATCATGATTCTGAGGAAGCCGTAGTTCACTGTGATATTAAGCCAAGCAATGTTCTTCTTGATGATGACATGGTTGCTCACTTGGGTGATTTTGGGTTAGCAAGACTCCTTCATGTGGCGACGGGAAATTCCAGCAGAGATCAAGTTAGTTCGTCTGCAATTAGAGGAACCATTGGATATGTTCCACCAGAGTACGGAACAGGGTGTGGAGTATCAACTAAAGGAGATATCTACAGCTATGGAATTCTTGTGTTGGAAATGATGACAGGAAGGAGACCAACAGATGCAATGTTTGGTGAGGGTGTAAGCCTACACAAATTCTGCCAAGTGGCAATTCCAGAAGGAATAACTGAGATTGTGGATTCACGTTTGGTTGTGGAAACTGGTGAAGAAGGAAGAAGGGTGATGGAAACAGAAATTAGGGAGTGTTTGGTTGACTTAGTTAGGATTGGAGTTAGATGTTGTGCAGAAAAACCTGTTGAGCGAATGGACATAAAAGATGTGGTACTGGAGTTGGATACAATCAAAGAGAGACTGTCACTGAGTCAATAG 3045 0.4095 MAVILFMFLLSVVSQNLVYMMPPTVGLSLSSESDKLALLALKLTNGVANALPSWNNSLHFCEWQGVTCGHRHMRVSVLHLQNQNWGGTLGPSLGNLTFLTTLILSNINMHGEIPTQIGRLKRLQVLHLSHYSLNGQIPVHLSNCSKLEVINLLYNKLNGKLPSSFGLGSMTRLNKLLLGANDLVGTVPPSLGNLSLLQNITVARNHLVGSIPHVLGRLSNLKELNLGLNNLSGVVPDSLYNLSNIQIFVLGVNRLSGTLPSKMQLAFPNLRAFFVGDNQLNGAFPSSISNITGLQAFDISLNGFSGPIPPTLGSLNKLETFSILDNRFGSGSAQDLDFLSSLTNCTQLKILLLGWNEFGGVFPDLIGNFSTNLTSLSMECNQITGKIPEGIGQLIGLTSFVVPNNYLEGSIPDSIGKLKNLVRLVLQENKLSGNIPTAIGNLTMLSELYLHTNRLVGGIPLSLKYCTRMQSFGVSSNNLSGDIPNQTFGNLEGLINLDLSNNSFTGSIPLEIGNLTHLSVLYLNENKLSGEIPAKLAACSALTELMLQINFFRGSIPSFFGSLGSLEILDLSNNNFSSTIPVELQNLTFLHALNLSFNHLYGEVPIGGVFNNVTVISLIGNKDLCGGIPQLNLPACSKLPSKKRKWTCRKKLILIIAIEVGVYLVAFTVFISIYLFRKRPKTPSTSCSPENEYVKVSYGDLHKATNGFSSSNLVGSGGFGSVYNGYLLPFQTPVAVKVLNLETVGASKSFAAECKALGRIMHRNLLNILTCCSSIDYNGKDFKAIVLEFMPNGCLESLLHDKVEPKSRNFNLDLDLVVNIALDVANALDYLHHDSEEAVVHCDIKPSNVLLDDDMVAHLGDFGLARLLHVATGNSSRDQVSSSAIRGTIGYVPPEYGTGCGVSTKGDIYSYGILVLEMMTGRRPTDAMFGEGVSLHKFCQVAIPEGITEIVDSRLVVETGEEGRRVMETEIRECLVDLVRIGVRCCAEKPVERMDIKDVVLELDTIKERLSLSQ 1014
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g02319 1014 SUPERFAMILY Protein kinase-like (PK-like) 682 1003 IPR011009 -
Viun8g02319 1014 ProSiteProfiles Protein kinase domain profile. 708 1006 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun8g02319 1014 SMART serkin_6 708 1011 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun8g02319 1014 Gene3D Phosphorylase Kinase; domain 1 672 789 - -
Viun8g02319 1014 PANTHER OS04G0122200 PROTEIN 100 213 - -
Viun8g02319 1014 Pfam Leucine rich repeat N-terminal domain 32 68 IPR013210 -
Viun8g02319 1014 ProSiteProfiles Leucine-rich repeat profile. 565 588 IPR001611 GO:0005515
Viun8g02319 1014 Pfam Protein kinase domain 710 941 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun8g02319 1014 FunFam LRR receptor-like serine/threonine-protein kinase EFR 679 789 - -
Viun8g02319 1014 Gene3D Ribonuclease Inhibitor 334 644 IPR032675 -
Viun8g02319 1014 Pfam Leucine rich repeat 541 600 IPR001611 GO:0005515
Viun8g02319 1014 Pfam Leucine rich repeat 197 255 IPR001611 GO:0005515
Viun8g02319 1014 Pfam Leucine rich repeat 469 528 IPR001611 GO:0005515
Viun8g02319 1014 Pfam Leucine rich repeat 396 455 IPR001611 GO:0005515
Viun8g02319 1014 SMART LRR_typ_2 515 539 IPR003591 -
Viun8g02319 1014 SMART LRR_typ_2 587 612 IPR003591 -
Viun8g02319 1014 SMART LRR_typ_2 218 241 IPR003591 -
Viun8g02319 1014 SMART LRR_typ_2 563 586 IPR003591 -
Viun8g02319 1014 SMART LRR_typ_2 418 442 IPR003591 -
Viun8g02319 1014 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 69 336 - -
Viun8g02319 1014 Gene3D Transferase(Phosphotransferase) domain 1 790 1013 - -
Viun8g02319 1014 ProSitePatterns Protein kinases ATP-binding region signature. 714 737 IPR017441 GO:0005524
Viun8g02319 1014 ProSitePatterns Serine/Threonine protein kinases active-site signature. 839 851 IPR008271 GO:0004672|GO:0006468
Viun8g02319 1014 SUPERFAMILY L domain-like 370 626 - -
Viun8g02319 1014 SUPERFAMILY RNI-like 78 384 - -
Viun8g02319 1014 Gene3D Ribonuclease Inhibitor 167 267 IPR032675 -
Viun8g02319 1014 Gene3D Ribonuclease Inhibitor 30 166 IPR032675 -
Viun8g02319 1014 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 790 1014 - -
Viun8g02319 1014 Gene3D Ribonuclease Inhibitor 268 333 IPR032675 -
Viun8g02319 1014 FunFam LRR receptor-like serine/threonine-protein kinase EFR 337 642 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g02319 Viun-Chr8 33218841 33222955 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g02319 29 1010 Receptor kinase-like Gene Family AT3G47570 44.052 0.0 771
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Viun8g02319 Pkinase 5e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g02319 - - gmx:100777490 1534.24