Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g02318 ATGGCTGTAATTCTATTTATGTTTCTTCTCAGTGTTGTTTCACAGAGCTTAGTGTACATGATGCCACCTACAGTTGCTCTCTCTTTGAGTTCAGAGAGTGACAAGCTGGCTTTACTTGCTTTGAAGCTTAAGCTTACCAATGGAGTCGCCAATGCTCTTCCATCATGGAACAACTCTCTGCATTTCTGTGAGTGGCAGGGTGTTACATGCGGACATCGCCACATGAGAGTCTCTGTCTTGCACTTGGAAAATGAAAACTGGGGTGGCACTCTTGGACCATCTTTGGGAAATCTAAGCTTCCTCACAACCCTCAATCTTTCCAACATCAACTTGCATGGGGAAATTCCCACACAAATTGGTCGACTAAAGAGATTGCAGGTTCTTGACTTGAGCCACAACGGTCTAAATGGTCAGATTCCTGTACACCTTTCTAACTGCACTAAACTTGAGATGATTAACTTGTTGTACAATAAACTCACAGGAAAAGTTCCCTCCTGGTTTGGAAGTGGATCCATGACACGGCTAAATAAGTTGCTTCTTGGTGTCAACAATCTAGTTGGTACTATCCCACCTTCCTTGGGGAATCTATCATCCCTTCAAAATATTTTCCTTGCAAGAAATCATTTGGTGGGAAGTATACCACATGTTTTGGGTCGGTTATCAAATTTAAAAATCGTGAATCTGGCTTTAAATAGTTTGTCAGGAGTAGTCCCTGATTCTCTTTATAATCTTTCTAATATTCAAATTCTTGCTCTCGCGAACAACCAGTTATCAGGTATTCTTCCATCAAAAATGCAACTTGGTTTTCCAAACCTTCAAGCCTTTTTGTTTGGAGCGAACCAGTTCAGTGGAACATTCCCGTCTTCAGTATTCAACATCACTGGATTGGAAAGGTTTGACATCTCCTCGAATGGTTTTAGTGGGTCAATTCCTCCCACTCTGGGAACCTTAAATAAACTTCATCTGTTTCACATTGCTTACAATAGTTTTGGAAGTGGGAGAGCTCGTGATTTGGATTTCCTTTCATCATTAACAAATTGTACTCATTTGCGCATACTTATTTTGGATGGCAATGGATTTGGTGGTGAGGTGCCACGTCTTATCGGCAATTTTTCTACCAACCTGAATATTCTTAGTATGGGGTTGAATCAAATATCTGGAACGATACCTGAAGGAATTTGGCAGCTAATCGGTTTGGCCGATATCATCATGCAAACTAATTATCTAGTGGGAACTGTTCCAGATTCAATTGTAAGGCTTAAAAATCTAGTACGATTAAACCTAGGAGAAAACAAATTGTCTGGTAATATTCCTACTGCCATTGGCAATCTTACTATGTTGTCTGAACTTTATCTGTACAGAAACAGATTCGTTGGAGACATTCCATTAAGCCTTAAATACTGCATGCGAATGCAGTCAATTGGTGTTTCCACCAACAACTTGAATGGGGATATCCCTAATCAAACCTTTGGCAATTTGGAAGGTTTGACAAAGCTTGACTTATCCTACAATTCTTTCACTGGTTCCATCCCTTCAGACTTTGGAAACTTGAAGCACCTTTTCGGTTTGTATCTTCGTGGAAACAAATTGTCTGGTGAATTACCCCAAGAGCTCGGCGCTTGTTACGGGTTAACAGAGCTTGCATTGGAGAGTAACTTCTTCCGCGGAAGCATACCGTCGTTCTTGGGCTCTTTAGGATCCCTTGAATTCCTAGACCTTTCTAACAATAACTTCTCAAGCACAATCCCTGTTCAACTACAAAAGTTGAGTTATTTGAATGCTTTGAACTTGTCTTTTAACCATCTTTATGGTGAGGTTCCCACAGGAGGTGTCTTTAATAATGTTACAGAAATTTCACTCATTGGAAATAAGGATCTCTGTGGCGGGATACCTCAACTGAAGCTTCCTGCATGCTCTAAGTTGTCCTCAAAGAAACACAAGTGGTCTTTTAAAACGAAACTCATCCTCATCATTGCAATTGTCGTTGGAGTGGGTGTGGTTACTTCAACACTGTTTATCAGCATCTATTTGTTCAGAAAAAAGCCCATAACACCCAAAACACCATCGAGTTCATGTTCTCATAAAAACAAGTACGTGAAGGTTTCTTATGGAGATCTGCATAAAGCAACCAATGGATTTTCTTCATCCAATTTGGTAGGTTCGGGAAGCTTTGGTTCTGTATATAGTGGATCTCTTCTCCCTTTCGAAACACCTATTGCTGTGAAGGTATTGAATCTTGAAATAGGTGGTGCATCAAAGAGTTTCGCAGCTGAGTGCAAGGCTCTAGGAAGGATCATGCATCGGAATCTTCTCAACATCTTGACTTGTTGTTCAAGTATCGATTATAACGGTAAAGATTTCAAGGCTATAGTTTATGACTTCATGCCTAATGGCAGTCTAGAAGGTTTGCTTCACGACAACGTAGTGCTGGAGTCTAGAAATTTCAGTGTCAACCTTGATCTTGTGGTAAATATTGCTCTTGATGTTGCCAATGCATTGGATTATCTTCATCATGGTTCTGAGGAAGCTATAGTTCACTGTGATATTAAGCCAAGCAACGTTCTTCTTGATGATGACATGGTTGCTCACTTGGGTGATTTTGGGTTAGCAAGACTCGTTCACGTGGCAACGGGACATTCCAGCAGAGATCAAGTTAGTTCCTCTGCAATTAGAGGAACCATTGGATATGTTCCACCAGAGTACGGAACAGGTTGTGGAGTATCAACTAAAGGAGATATGTACAGCTACGGAATTCTTGTGTTAGAGATGGTGACAGGGAGGAGACCAACAGATGCAATGTTTGGTGAAGGTGTAAGTCTACACAAATTCTGCCAAATGGCAATTCCAGAAGGGATCACTGAGATAGCAGATTCACGTTTGCTTGTACCAGTTGTTGAAGAAGGAAGAAGGATGATGGAAATAAAAATTAGGGAGTGTTTGGTGGGCTTAGCAAGGATTGGAGTTGAATGTTCTGCAGAATTACCTGTTGATCGAATGGACATAAAAGATGTGGTACTGGAGCTGCACTCAATCAAACAGAGGCTGTGTCACTGA 3054 0.409 MAVILFMFLLSVVSQSLVYMMPPTVALSLSSESDKLALLALKLKLTNGVANALPSWNNSLHFCEWQGVTCGHRHMRVSVLHLENENWGGTLGPSLGNLSFLTTLNLSNINLHGEIPTQIGRLKRLQVLDLSHNGLNGQIPVHLSNCTKLEMINLLYNKLTGKVPSWFGSGSMTRLNKLLLGVNNLVGTIPPSLGNLSSLQNIFLARNHLVGSIPHVLGRLSNLKIVNLALNSLSGVVPDSLYNLSNIQILALANNQLSGILPSKMQLGFPNLQAFLFGANQFSGTFPSSVFNITGLERFDISSNGFSGSIPPTLGTLNKLHLFHIAYNSFGSGRARDLDFLSSLTNCTHLRILILDGNGFGGEVPRLIGNFSTNLNILSMGLNQISGTIPEGIWQLIGLADIIMQTNYLVGTVPDSIVRLKNLVRLNLGENKLSGNIPTAIGNLTMLSELYLYRNRFVGDIPLSLKYCMRMQSIGVSTNNLNGDIPNQTFGNLEGLTKLDLSYNSFTGSIPSDFGNLKHLFGLYLRGNKLSGELPQELGACYGLTELALESNFFRGSIPSFLGSLGSLEFLDLSNNNFSSTIPVQLQKLSYLNALNLSFNHLYGEVPTGGVFNNVTEISLIGNKDLCGGIPQLKLPACSKLSSKKHKWSFKTKLILIIAIVVGVGVVTSTLFISIYLFRKKPITPKTPSSSCSHKNKYVKVSYGDLHKATNGFSSSNLVGSGSFGSVYSGSLLPFETPIAVKVLNLEIGGASKSFAAECKALGRIMHRNLLNILTCCSSIDYNGKDFKAIVYDFMPNGSLEGLLHDNVVLESRNFSVNLDLVVNIALDVANALDYLHHGSEEAIVHCDIKPSNVLLDDDMVAHLGDFGLARLVHVATGHSSRDQVSSSAIRGTIGYVPPEYGTGCGVSTKGDMYSYGILVLEMVTGRRPTDAMFGEGVSLHKFCQMAIPEGITEIADSRLLVPVVEEGRRMMEIKIRECLVGLARIGVECSAELPVDRMDIKDVVLELHSIKQRLCH 1017
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g02318 1017 PANTHER OS04G0122200 PROTEIN 101 235 - -
Viun8g02318 1017 Gene3D Transferase(Phosphotransferase) domain 1 795 1016 - -
Viun8g02318 1017 ProSiteProfiles Leucine-rich repeat profile. 567 588 IPR001611 GO:0005515
Viun8g02318 1017 SUPERFAMILY RNI-like 269 608 - -
Viun8g02318 1017 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 795 1017 - -
Viun8g02318 1017 SMART LRR_typ_2 420 444 IPR003591 -
Viun8g02318 1017 SMART LRR_typ_2 493 516 IPR003591 -
Viun8g02318 1017 SMART LRR_typ_2 565 588 IPR003591 -
Viun8g02318 1017 SMART LRR_typ_2 517 541 IPR003591 -
Viun8g02318 1017 SMART LRR_typ_2 220 243 IPR003591 -
Viun8g02318 1017 SMART LRR_typ_2 172 196 IPR003591 -
Viun8g02318 1017 SMART LRR_typ_2 244 267 IPR003591 -
Viun8g02318 1017 SMART LRR_typ_2 122 146 IPR003591 -
Viun8g02318 1017 SMART serkin_6 713 980 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun8g02318 1017 FunFam LRR receptor-like serine/threonine-protein kinase EFR 685 794 - -
Viun8g02318 1017 ProSitePatterns Protein kinases ATP-binding region signature. 719 742 IPR017441 GO:0005524
Viun8g02318 1017 SUPERFAMILY Protein kinase-like (PK-like) 688 1008 IPR011009 -
Viun8g02318 1017 Gene3D Ribonuclease Inhibitor 335 647 IPR032675 -
Viun8g02318 1017 SUPERFAMILY L domain-like 31 330 - -
Viun8g02318 1017 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 71 337 - -
Viun8g02318 1017 Gene3D Ribonuclease Inhibitor 31 173 IPR032675 -
Viun8g02318 1017 FunFam LRR receptor-like serine/threonine-protein kinase EFR 338 644 - -
Viun8g02318 1017 Pfam Protein kinase domain 715 945 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun8g02318 1017 ProSitePatterns Serine/Threonine protein kinases active-site signature. 844 856 IPR008271 GO:0004672|GO:0006468
Viun8g02318 1017 Gene3D Phosphorylase Kinase; domain 1 678 794 - -
Viun8g02318 1017 Pfam Leucine rich repeat N-terminal domain 32 70 IPR013210 -
Viun8g02318 1017 Pfam Leucine rich repeat 198 257 IPR001611 GO:0005515
Viun8g02318 1017 Pfam Leucine rich repeat 472 530 IPR001611 GO:0005515
Viun8g02318 1017 ProSiteProfiles Protein kinase domain profile. 713 1017 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun8g02318 1017 Pfam Leucine Rich Repeat 124 146 IPR001611 GO:0005515
Viun8g02318 1017 Gene3D Ribonuclease Inhibitor 174 334 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g02318 Viun-Chr8 33190485 33193901 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g02318 29 1015 Receptor kinase-like Gene Family AT3G47570 44.769 0.0 768
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Viun8g02318 Pkinase 7.8e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g02318 - - gmx:100777490 1464.51