Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g02313 ATGTGCAAAACAATGGCTGTAATTCTATTCATGTTCATTCTCAGTGTTGTTTCACAGAACTTAGTGTACATGATGCCACCTACAGTTGCTCTCTCTTTGAGTTCAGAGAGTGACAAGCTGGCTTTACTTGCTTTGAAGCATGAGCTTACCAATGGAGTCGCCAATGCTCTTCCATCGTGGAATAACTCTTTACATTTCTGTGAGTGGCAGGGTGTTACATGCGGACACCGCCACATGAGAGTCTCTGTCTTGCACTTGGAAAATGAAAACTGGGGTGGCACTCTTGGACCATCTTTGGGAAATCTAAGCTTCCTCACAACCCTCATTCTTTCCAACATCAACTTGCATGGGGAAATTCCCACACAAATTGGTCGACTAAAGAGATTGCAGGTTCTTGACTTGAGCCACAACGGTCTAAATGGAAAAGTTCCCTCCTGGTTTGGAAGTGGATCCATGACACGGCTAAATAAGTTGCTTCTTGGTGTCAACGATCTAGTTGGTACTATCCCACCTTCCTTGGGGAATCTATCATCCCTTCAAAATATTTTCCTTGCAAGAAATCATTTGGTGGGAAGTATACCACATGTTTTGGGTCGGTTATCAAATTTAAAAATCGTGAATCTGGCTTTAAATAGTTTGTCAGGAGTAGTCCCTGATTCTCTTTATAATCTTTCTAATATTCAAATTCTTGCTCTCGCGAACAACCAGTTATCAGGTATTCTTCCATCAAAAATGCAACTTGGTTTTCCAAACCTTCAAGCCTTTTTGTTTGGAGCGAACCAGTTCAGTGGAACATTCCCGTCTTCAGTATTCAACATCACTGGATTGGAAAGGTTTGATGTCTCCTCGAATGGTTTTAGTGGGTCAATTCCTCCCACTCTGGGAACCTTAAATAAACTTCAGCTGTTTCACATTGCTTACAATAGTTTTGGAAGTGGGAGAGCTCGTGATTTGGATTTCCTTTCATCATTAACAAATTGTACTCATTTGCGCATACTTATTTTGGATGGCAATGGATTTGGTGGTGAGGTGCCACGTCTTATCGGCAATTTTTCTACCAACCTGAATATTCTTAGTATGGGGTTGAATCAAATATCTGGAACGATACCTGAAGGAATTTGGCAGCTAATCGGTTTGGCCGATATCATCATGCAAACTAATTATCTAGTGGGAACTGTTCCAGATTCAATTGTAAGGCTTAAAAATCTAGTACGATTAAACCTAGGAGAAAACAAATTGTCTGGTAATATTCCTACTGCCATTGGCAATCTTACTATGTTGTCTGAACTTTATCTGTACAGAAACAGATTCGTTGGAGACATTCCATTAAGCCTTAAATACTGCATGCGAATGCAGTCAATTGGTGTTTCCACCAACAACTTGAATGGGGATATCCCTAATCAAACCTTTGGCAATTTGGAAGGTTTGACAAAGCTTGACTTATCCTACAATTCTTTCACTGGTTCCATCCCTTCAGACTTTGGAAACTTGAAGCACCTTTTCGGTTTGTATCTTCGTGGAAACAAATTGTCTGGTGAATTACCCCAAGAGCTCGGCGCTTGTTACGGGTTAACAGAGCTTGCATTGGAGAGTAACTTCTTCCGCGGAAGCATACCGTCGTTCTTGGGCTCTTTAGGATCCCTTGAATTCCTAGACCTTTCTAACAATAACTTCTCAAGCACAATCCCTGTTGAACTACAAAAGTTGAGTTATTTGAATGCTTTGAACTTGTCTTTTAACCATCTTTATGGTGAGGTTCCCACAGGAGGTGTCTTTAATAATGTTACAGAAATTTCACTCATTGGAAATAAGGATCTCTGTGGCGGGATACCTCAACTGAAGCTTCCTGCATGCTCTAAGTTGTCCTCAAAGAAACACAAGTGGTCTTTTAAAACGAAACTCATCCTCATCATTGCAATTGTCGTTGGAGTGGGTTTGGTTACTTCAACACTGTTTATCAGCATCTATTTGTTCAGAAAAAGGACCATAACACCCAAAACACCATCGACTTCATGTTCTCTTAAAAACAAGTACGTGAAGGTTTCTTATGGAGATCTGCATAAAGCAACCAATGGATTTTCTTCATCCAATTTGGTAGGTTCGGGAAGCTTTGGTTCTGTATATAGTGGATCTCTTCTCCCTTTCGAAACACCTATTGCTGTGAAGGTATTGAGTCTTGAAATAGGTGGTGCATCAAAGAGTTTCGCAGCTGAGTGCAAGGCTCTAGGAAGGATCATGCATCGGAATCTTCTCAACATCTTGACTTGTTGCTCAAGTATTGATTATAACGGTAAAGATTTCAAGGCTATAGTTTTCGAGTTCATGCCTAATGGCAGTCTAGAAAGTTTGCTGCACGACAACGTTGAGCCCGAGTCGAGAAATTTGAGTCTCAACCTTGATCTTGTGGTAAATATTGCTCTTGACGTTGCTAATGCATTGGATTATCTTCATCATGGTTCTGAGGAAGCTATAGTTCACTGTGATATTAAGCCGAGCAATGTTCTTCTTGATGATGACATGGTTGCTCACTTGGGTGATTTTGGGTTAGCAAGACTCCTTCATGTTGCGACGGGAAATTCCAGTAGAGATCAAGTTAGTTCCTCTGGTATTAGAGGAACCATTGGATATGTTCCACCAGAGTACGGAACAGGTTGTCGAGTATCAGCTAAAGGAGATATGTACAGTTACGGAATTCTTGTGCTGGAGATGGTGACAGGAAGGAAACCAACAGATGCAATGTTTGGTGAGGGTCTAAGCCTACACAAATTCTGCCAAACGGCAATTCCAGAAGGAATCACCGAGATCGTGGATTCACGTTTGCTTGAGCCAAATGCTGCAGAAGGAAGAAACGTTATGGAAAGCAAAATTAGGGAGTGTGTGGTTGCTTTAGCTAGGATTGGAGTTGAATGTTCTGCAGAATTAGCTGTTGATCGAATGGACATAAAAGATTTGGTAATGGAGCTGCACACAATCAAACAGAGGCTGTGTCACTAA 2994 0.4115 MCKTMAVILFMFILSVVSQNLVYMMPPTVALSLSSESDKLALLALKHELTNGVANALPSWNNSLHFCEWQGVTCGHRHMRVSVLHLENENWGGTLGPSLGNLSFLTTLILSNINLHGEIPTQIGRLKRLQVLDLSHNGLNGKVPSWFGSGSMTRLNKLLLGVNDLVGTIPPSLGNLSSLQNIFLARNHLVGSIPHVLGRLSNLKIVNLALNSLSGVVPDSLYNLSNIQILALANNQLSGILPSKMQLGFPNLQAFLFGANQFSGTFPSSVFNITGLERFDVSSNGFSGSIPPTLGTLNKLQLFHIAYNSFGSGRARDLDFLSSLTNCTHLRILILDGNGFGGEVPRLIGNFSTNLNILSMGLNQISGTIPEGIWQLIGLADIIMQTNYLVGTVPDSIVRLKNLVRLNLGENKLSGNIPTAIGNLTMLSELYLYRNRFVGDIPLSLKYCMRMQSIGVSTNNLNGDIPNQTFGNLEGLTKLDLSYNSFTGSIPSDFGNLKHLFGLYLRGNKLSGELPQELGACYGLTELALESNFFRGSIPSFLGSLGSLEFLDLSNNNFSSTIPVELQKLSYLNALNLSFNHLYGEVPTGGVFNNVTEISLIGNKDLCGGIPQLKLPACSKLSSKKHKWSFKTKLILIIAIVVGVGLVTSTLFISIYLFRKRTITPKTPSTSCSLKNKYVKVSYGDLHKATNGFSSSNLVGSGSFGSVYSGSLLPFETPIAVKVLSLEIGGASKSFAAECKALGRIMHRNLLNILTCCSSIDYNGKDFKAIVFEFMPNGSLESLLHDNVEPESRNLSLNLDLVVNIALDVANALDYLHHGSEEAIVHCDIKPSNVLLDDDMVAHLGDFGLARLLHVATGNSSRDQVSSSGIRGTIGYVPPEYGTGCRVSAKGDMYSYGILVLEMVTGRKPTDAMFGEGLSLHKFCQTAIPEGITEIVDSRLLEPNAAEGRNVMESKIRECVVALARIGVECSAELAVDRMDIKDLVMELHTIKQRLCH 997
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g02313 997 Gene3D Phosphorylase Kinase; domain 1 657 774 - -
Viun8g02313 997 SMART LRR_typ_2 126 149 IPR003591 -
Viun8g02313 997 SMART LRR_typ_2 200 223 IPR003591 -
Viun8g02313 997 SMART LRR_typ_2 224 247 IPR003591 -
Viun8g02313 997 SMART LRR_typ_2 545 568 IPR003591 -
Viun8g02313 997 SMART LRR_typ_2 497 521 IPR003591 -
Viun8g02313 997 SMART LRR_typ_2 400 424 IPR003591 -
Viun8g02313 997 SMART LRR_typ_2 473 496 IPR003591 -
Viun8g02313 997 PANTHER OS04G0122200 PROTEIN 93 215 - -
Viun8g02313 997 Gene3D Ribonuclease Inhibitor 320 627 IPR032675 -
Viun8g02313 997 FunFam Inactive leucine-rich repeat receptor-like protein kinase 326 618 - -
Viun8g02313 997 FunFam LRR receptor-like serine/threonine-protein kinase EFR 664 774 - -
Viun8g02313 997 Gene3D Ribonuclease Inhibitor 248 319 IPR032675 -
Viun8g02313 997 Gene3D Ribonuclease Inhibitor 151 247 IPR032675 -
Viun8g02313 997 Pfam Leucine Rich Repeat 128 148 IPR001611 GO:0005515
Viun8g02313 997 ProSiteProfiles Leucine-rich repeat profile. 547 568 IPR001611 GO:0005515
Viun8g02313 997 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 775 997 - -
Viun8g02313 997 Pfam Leucine rich repeat N-terminal domain 36 74 IPR013210 -
Viun8g02313 997 SUPERFAMILY L domain-like 35 345 - -
Viun8g02313 997 Gene3D Transferase(Phosphotransferase) domain 1 775 996 - -
Viun8g02313 997 Gene3D Ribonuclease Inhibitor 37 150 IPR032675 -
Viun8g02313 997 SUPERFAMILY Protein kinase-like (PK-like) 669 988 IPR011009 -
Viun8g02313 997 ProSitePatterns Serine/Threonine protein kinases active-site signature. 824 836 IPR008271 GO:0004672|GO:0006468
Viun8g02313 997 SMART serkin_6 693 960 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun8g02313 997 Pfam Protein kinase domain 695 925 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun8g02313 997 FunFam Lrr receptor-like serinethreonine-protein kinase gso2 246 325 - -
Viun8g02313 997 FunFam Leucine-rich repeat receptor-like kinase 40 151 - -
Viun8g02313 997 ProSiteProfiles Protein kinase domain profile. 693 997 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun8g02313 997 ProSitePatterns Protein kinases ATP-binding region signature. 699 722 IPR017441 GO:0005524
Viun8g02313 997 SUPERFAMILY L domain-like 353 608 - -
Viun8g02313 997 Pfam Leucine rich repeat 178 237 IPR001611 GO:0005515
Viun8g02313 997 Pfam Leucine rich repeat 524 582 IPR001611 GO:0005515
Viun8g02313 997 Pfam Leucine rich repeat 452 510 IPR001611 GO:0005515
Viun8g02313 997 FunFam Leucine-rich repeat receptor protein kinase EMS1 152 245 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g02313 Viun-Chr8 33109050 33112443 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g02313 33 995 Receptor kinase-like Gene Family AT3G47570 43.706 0.0 741
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Viun8g02313 Pkinase 2.4e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g02313 - - gmx:100776429 1425.99