Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g02312 ATGTGCAAAACAATGGCTGTAATTCTATTCATGTTCATTCTCAGTGTTGTTTCACAGAACTTAGTGTACATGATGCCACCTACAGTTGCTCTCTCTTTGAGTTCAGAGAGTGACAAGCTGGCTTTACTTGCTTTGAAGCATGAGCTTACCAATGGAGTCGCCAATGCTCTTCCATCGTGGAATAACTCTTTACATTTCTGTGAGTGGCAGGGTGTTACATGCGGACACCGCCACATGAGAGTCTCTGTCTTGCACTTGGAAAATGAAAACTGGGGTGGCACTCTTGGACCATCTTTGGGAAATCTAAGCTTCCTCACAACCCTCATTCTTTCCAACATCAACTTGCATGGGGAAATTCCCACACAAATTGGTCGACTAAAGAGATTGCAGGTTCTTGACTTGAGCCACAACGGTCTAAATGGTCAGATTCCTGTACACCTTTCTAACTGCACTAAACTTGAGATGATTAACTTGTTGTACAATAAACTCACAGGAAAAGTTCCCTCCTGGTTTGGAAGTGGATCCATGACACGGCTAAATAAGTTGCTTCTTGGTGTCAACGATCTAGTTGGTACTATCCCACCTTCCTTGGGGAATCTATCATCCCTTCAAAATATTTTCCTTGCAAGAAATCATTTGGTGGGAAGTATACCACATGTTTTGGGTCGGTTATCAAATTTAAAAATCGTGAATCTGGCTTTAAATAGTTTGTCAGGAGTAGTCCCTGATTCTCTTTATAATCTTTCTAATATTCAAATTCTTGCTCTCGCGAACAACCAGTTATCAGGTATTCTTCCATCAAAAATGCAACTTGGTTTTCCAAACCTTCAAGCCTTTTTGTTTGGAGCGAACCAGTTCAGTGGAACATTCCCGTCTTCAGTATTCAACATCACTGGATTGGAAAGGTTTGATGTCTCCTCGAATGGTTTTAGTGGGTCAATTCCTCCCACTCTGGGAACCTTAAATAAACTTCAGCTGTTTCACATTGCTTACAATAGTTTTGGAAGTGGGAGAGCTCGTGATTTGGATTTCCTTTCATCATTAACAAATTGTACTCATTTGCGCATACTTATTTTGGATGGCAATGGATTTGGTGGTGAGGTGCCACGTCTTATCGGCAATTTTTCTACCAACCTGAATATTCTTAGTATGGGGTTGAATCAAATATCTGGAACGATACCTGAAGGAATTTGGCAGCTAATCGGTTTGGCCGATATCATCATGCAAACTAATTATCTAGTGGGAACTGTTCCAGATTCAATTGTAAGGCTTAAAAATCTAGTACGATTAAACCTAGGAGAAAACAAATTGTCTGGTAATATTCCTACTGCCATTGGCAATCTTACTATGTTGTCTGAACTTTATCTGTACAGAAACAGATTCGTTGGAGACATTCCATTAAGCCTTAAATACTGCATGCGAATGCAGTCAATTGGTGTTTCCACCAACAACTTGAATGGGGATATCCCTAATCAAACCTTTGGCAATTTGGAAGGTTTGACAAAGCTTGACTTATCCTACAATTCTTTCACTGGTTCCATCCCTTCAGACTTTGGAAACTTGAAGCACCTTTTCGGTTTGTATCTTCGTGGAAACAAATTGTCTGGTGAATTACCCCAAGAGCTCGGCGCTTGTTACGGGTTAACAGAGCTTGCATTGGAGAGTAACTTCTTCCGCGGAAGCATACCGTCGTTCTTGGGCTCTTTAGGATCCCTTGAATTCCTAGACCTTTCTAACAATAACTTCTCAAGCACAATCCCTGTTGAACTACAAAAGTTGAGTTATTTGAATGCTTTGAACTTGTCTTTTAACCATCTTTATGGTGAGGTTCCCACAGGAGGTGTCTTTAATAATGTTACAGAAATTTCACTCATTGGAAATAAGGATCTCTGTGGCGGGATACCTCAACTGAAGCTTCCTGCATGCTCTAAGTTGTCCTCAAAGAAACACAAGTGGTCTTTTAAAACGAAACTCATCCTCATCATTGCAATTGTCGTTGGAGTGGGTTTGGTTACTTCAACACTGTTTATCAGCATCTATTTGTTCAGAAAAAGGACCATAACACCCAAAACACCATCGACTTCATGTTCTCTTAAAAACAAGTACGTGAAGGTTTCTTATGGAGATCTGCATAAAGCAACCAATGGATTTTCTTCATCCAATTTGGTAGGTTCGGGAAGCTTTGGTTCTGTATATAGTGGATCTCTTCTCCCTTTCGAAACACCTATTGCTGTGAAGGTATTGAGTCTTGAAATAGGTGGTGCATCAAAGAGTTTCGCAGCTGAGTGCAAGGCTCTAGGAAGGATCATGCATCGGAATCTTCTCAACATCTTGACTTGTTGCTCAAGTATTGATTATAACGGTAAAGATTTCAAGGCTATAGTTTTCGAGTTCATGCCTAATGGCAGTCTAGAAAGTTTGCTGCACGACAACGTTGAGCCCGAGTCGAGAAATTTGAGTCTCAACCTTGATCTTGTGGTAAATATTGCTCTTGACGTTGCTAATGCATTGGATTATCTTCATCATGGTTCTGAGGAAGCTATAGTTCACTGTGATATTAAGCCGAGCAATGTTCTTCTTGATGATGACATGGTTGCTCACTTGGGTGATTTTGGGTTAGCAAGACTCCTTCATGTTGCGACGGGAAATTCCAGTAGAGATCAAGTTAGTTCCTCTGGTATTAGAGGAACCATTGGATATGTTCCACCAGAGTACGGAACAGGTTGTCGAGTATCAGCTAAAGGAGATATGTACAGTTACGGAATTCTTGTGCTGGAGATGGTGACAGGAAGGAAACCAACAGATGCAATGTTTGGTGAGGGTCTAAGCCTACACAAATTCTGCCAAACGGCAATTCCAGAAGGAATCACCGAGATCGTGGATTCACGTTTGCTTGAGCCAAATGCTGCAGAAGGAAGAAACGTTATGGAAAGCAAAATTAGGGAGTGTGTGGTTGCTTTAGCTAGGATTGGAGTTGAATGTTCTGCAGAATTAGCTGTTGATCGAATGGACATAAAAGATTTGGTAATGGAGCTGCACACAATCAAACAGAGGCTGTGTCACTAA 3066 0.4103 MCKTMAVILFMFILSVVSQNLVYMMPPTVALSLSSESDKLALLALKHELTNGVANALPSWNNSLHFCEWQGVTCGHRHMRVSVLHLENENWGGTLGPSLGNLSFLTTLILSNINLHGEIPTQIGRLKRLQVLDLSHNGLNGQIPVHLSNCTKLEMINLLYNKLTGKVPSWFGSGSMTRLNKLLLGVNDLVGTIPPSLGNLSSLQNIFLARNHLVGSIPHVLGRLSNLKIVNLALNSLSGVVPDSLYNLSNIQILALANNQLSGILPSKMQLGFPNLQAFLFGANQFSGTFPSSVFNITGLERFDVSSNGFSGSIPPTLGTLNKLQLFHIAYNSFGSGRARDLDFLSSLTNCTHLRILILDGNGFGGEVPRLIGNFSTNLNILSMGLNQISGTIPEGIWQLIGLADIIMQTNYLVGTVPDSIVRLKNLVRLNLGENKLSGNIPTAIGNLTMLSELYLYRNRFVGDIPLSLKYCMRMQSIGVSTNNLNGDIPNQTFGNLEGLTKLDLSYNSFTGSIPSDFGNLKHLFGLYLRGNKLSGELPQELGACYGLTELALESNFFRGSIPSFLGSLGSLEFLDLSNNNFSSTIPVELQKLSYLNALNLSFNHLYGEVPTGGVFNNVTEISLIGNKDLCGGIPQLKLPACSKLSSKKHKWSFKTKLILIIAIVVGVGLVTSTLFISIYLFRKRTITPKTPSTSCSLKNKYVKVSYGDLHKATNGFSSSNLVGSGSFGSVYSGSLLPFETPIAVKVLSLEIGGASKSFAAECKALGRIMHRNLLNILTCCSSIDYNGKDFKAIVFEFMPNGSLESLLHDNVEPESRNLSLNLDLVVNIALDVANALDYLHHGSEEAIVHCDIKPSNVLLDDDMVAHLGDFGLARLLHVATGNSSRDQVSSSGIRGTIGYVPPEYGTGCRVSAKGDMYSYGILVLEMVTGRKPTDAMFGEGLSLHKFCQTAIPEGITEIVDSRLLEPNAAEGRNVMESKIRECVVALARIGVECSAELAVDRMDIKDLVMELHTIKQRLCH 1021
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g02312 1021 Gene3D Ribonuclease Inhibitor 175 337 IPR032675 -
Viun8g02312 1021 Pfam Leucine rich repeat N-terminal domain 36 74 IPR013210 -
Viun8g02312 1021 SMART LRR_typ_2 126 150 IPR003591 -
Viun8g02312 1021 SMART LRR_typ_2 248 271 IPR003591 -
Viun8g02312 1021 SMART LRR_typ_2 569 592 IPR003591 -
Viun8g02312 1021 SMART LRR_typ_2 424 448 IPR003591 -
Viun8g02312 1021 SMART LRR_typ_2 497 520 IPR003591 -
Viun8g02312 1021 SMART LRR_typ_2 521 545 IPR003591 -
Viun8g02312 1021 SMART LRR_typ_2 224 247 IPR003591 -
Viun8g02312 1021 Gene3D Phosphorylase Kinase; domain 1 681 798 - -
Viun8g02312 1021 ProSitePatterns Serine/Threonine protein kinases active-site signature. 848 860 IPR008271 GO:0004672|GO:0006468
Viun8g02312 1021 Pfam Protein kinase domain 719 949 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun8g02312 1021 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 276 1013 - -
Viun8g02312 1021 SMART serkin_6 717 984 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun8g02312 1021 SUPERFAMILY RNI-like 273 612 - -
Viun8g02312 1021 Gene3D Transferase(Phosphotransferase) domain 1 799 1020 - -
Viun8g02312 1021 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 799 1021 - -
Viun8g02312 1021 ProSitePatterns Protein kinases ATP-binding region signature. 723 746 IPR017441 GO:0005524
Viun8g02312 1021 ProSiteProfiles Leucine-rich repeat profile. 571 592 IPR001611 GO:0005515
Viun8g02312 1021 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 75 341 - -
Viun8g02312 1021 FunFam LRR receptor-like serine/threonine-protein kinase EFR 342 648 - -
Viun8g02312 1021 Pfam Leucine rich repeat 202 261 IPR001611 GO:0005515
Viun8g02312 1021 Pfam Leucine rich repeat 548 606 IPR001611 GO:0005515
Viun8g02312 1021 Pfam Leucine rich repeat 476 534 IPR001611 GO:0005515
Viun8g02312 1021 Gene3D Ribonuclease Inhibitor 338 651 IPR032675 -
Viun8g02312 1021 Pfam Leucine Rich Repeat 128 150 IPR001611 GO:0005515
Viun8g02312 1021 ProSiteProfiles Protein kinase domain profile. 717 1021 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun8g02312 1021 Gene3D Ribonuclease Inhibitor 34 174 IPR032675 -
Viun8g02312 1021 FunFam LRR receptor-like serine/threonine-protein kinase EFR 688 798 - -
Viun8g02312 1021 SUPERFAMILY L domain-like 35 334 - -
Viun8g02312 1021 SUPERFAMILY Protein kinase-like (PK-like) 693 1012 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g02312 Viun-Chr8 33109050 33112443 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g02312 33 1019 Receptor kinase-like Gene Family AT3G47570 44.612 0.0 769
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Viun8g02312 Pkinase 2.5e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g02312 - - gmx:100777490 1493.79