Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g02311 ATGGCTGTAATTCTATTCATGTTCATTCTCAGTGTTGTTTCACAGAACTTAGTGCACATGATGCCACGTACAGTTGCTCTCTCTTTGAGTTCAGAGAGTGACAAGCTGGCTTTACTTGCTTTGAAGCTTAAGCTTACCAAAGGAGTGCCTAATGCTCTTCCATCGTGGAACAGCTCTTTGCATGTCTGTGAATGGAAGGGTGTTGCATGCGGACAACGCCACATGAGAGTCTCCGTCTTGCACTTGGAAAATCAAACATGGGGTGGCACTCTTGGACCATCTTTGGGAAATCTAAGCTTCCTCACAACCCTCATTCTTTACAACATCGACTTGTATGGGGAAATTCCCACACAAATTGGACAACTAAAGAGGTTGCAGCTTCTTGATTTGAGCCACAACAACCTAAATGGTCAGATTCCTACACACCTTACCAACTGCTCTAAACTTGAGGTCATTAGCTTGTTGGAAAATAAACTCACTGGAAAAATTCCCTCCTGGTTTGGAAGTGGATCCATGACACGGCTAAAACAGTTGTTTCTTGGTGCCAATGATCTAGTTGGTACCATCCCACCTTCCTTGGGGAATCTTTCATCCCTTCAAAATATCTCAGTTAAAGGAAATCATTTGGTGGGAAGTATACCACATGTTTTGGGTCAATTATCAAATTTGAAAAAACTGGATCTTGGTTCAAATAGTTTGTCAGGAGTAGTCCCTTATTCTCTTTATAATCTTTCCGGTATTCAAAGTCTTGCTCTCGATGAAAACCAGTTATCTGGGACTTTTCCGTCAAAAATGCAACTTGTTTTTCCAAACCTTAGAGCATTCTTGGTTGGAGGGAACCAGTTCAATGGAACTTTCCCGTCTTCAGTATTCAACATCACTGGATTGGAAAAGTTTGATATCTCCTCAAATGGTTTTAGTGGGTCAATTCCTCCCACTCTGGGAACCTTAAATAAACTTCAGCTGTTTCACATTGCTTACAATAGTTTTGGAAGTGGGAGAGCTCGTGATTTGGATTTCCTTTCATCATTAACAAATTGTACTCATTTGCGCATACTTATTTTGGATGGCAATGGATTTGGTGGTGACTTGCCACGTCTTATCGGAAATTTTTCTACCAACCTGAATATTCTTAGTATGGGGTCGAATCAAATATCTGGAACGATACCTGAAGGAATTTGGCAGCTAATCGGTTTGGCCGATATCACCATGCAAACTAATTATCTAGTGGGAACTGTTCCAGATTCAATTGTAAGGCTTAAAAATCTAGTACGATTGGACCTAGCAGAAAACAAATTGTCTGGTAATATTCCTACTGCCATTGGCAATCTTACTATGTTGTCTGAACTTTATCTGTACAGAAACAGATTCGTTGGAGACATTCCATTAACCCTTAAATACTGCATGCGAATGCAGACAATTGGTGTTTCCACCAACAACTTGAATGGGGATATCCCTAATCAAACCTTTGGCAATTTTGAAGGTTTGACAAAGCTTGACTTATCCTACAATTCTTTCACTGGTTCCATCCCTTCAGACATTGGAAACTTGAAGCACCTTTTCGGTTTGTATCTTCGTGGAAACAAATTGTCTGGTGAATTACCCCAAGAGCTTGGCGCTTGTTACGGGTTAACAGAGCTTGCATTGGAGAGTAACTTCTTCCGCGGAAGCATACCGTCGTTCTTGGGCTCTTTAGGATCCCTTGAATTCCTAGACCTTTCTAACAATAACTTCTCAAGCACAATCCCTGTTGAACTACAAAAGTTGAGTTATTTGAATGCTTTGAACTTGTCTTTTAACCATCTTTATGGTGAGGTTCCCACAGGAGGTGTCTTTAATAATGTTACAGAAATTTCACTCATTGGAAATAAGGATCTTTGTGGCGGGATACCTCAACTGAAGCTTCCTGCATGCTCTAAGTTGTCCTCAAAGAAACACAAGTGGTCTTTTAAAACGAAACTCATCCTCATCATTGCAATTGTCGTTGGAGTGGGTTTGGTTACTTCAACACTGTTTATCAGCATCTATTTGTTCAGAAAAAGGCCCATAACACCCAAAACACCATCGACTTCATGTTCTCATAAAAACAAGTACGTGAAGGTTTCTTATGGAGATCTGCATAAAGCAACCAATGGATTTTCTTCATCCAATTTGGTAGGTTCGGGAAGCTTTGGTTCTGTATATAGTGGATCTCTTCTCCCTTTCGAAACACCTATTGCTGTGAAGGTATTGAATCTTGAAATAGGTGGTGCATCAAAGAGTTTCGCAGCTGAGTGCAAGGCTCTAGGAAGGATCATGCATCGGAATCTTGTCAACATCTTGACTTGTTGTTCAAGTATTGATTATAACGGTAAAGATTTCAAGGCTATAGTTTTCGAGTTCATGCCTAATGGCACTCTAGAAAGTTTGCTGCACGACAAAGTAGAGCCCAAATCTAAAAATTTGAGTCTCAACCTTGATCTTGTGGTAAATATTGCTCTTGACGTTGCTAATGCATTGGATTATCTTCATCATGATTTTGAGGAAGCTGTGGTTCACTGTGATATTAAGCCAAGCAACGTTCTTCTTGATGATGAAATGGTTGCTCACTTGGGTGATTTTGGGTTAGCAAGGCTCCTTCATGTGGCGACGGGACATTCCAGCAGAGATGAGGTTAGTTCCTCTGCAATTAGAGGAACCTTTGGATATATTCCACCAGAGTACGGAACAGGTTGTCGAGTATCAGCTAAAGGAGATATGTACAGTTACGGAATTCTTGTGCTGGAGATGGTGACAGGAAGGAAACCAACAGATTCAATGTTTGGTGAGGGTCTAAGCCTACACAAATTCTGCGAAATGGCAATTCCAGAAGGAATCACTGAGATAGTAGATTCACGTTTGCTTGTGCCAAATGCTGCAGAAGGAAGAAAGGTTATGGAAAGCAAAATTAGAAAGTGTTTGGTTGCTTTAGCTAGGATTGGAGTTGGATGTTCTGCAGAATTACCTGTTGAGCGAATGGACATAAAAGATGTGGTATTGGAGCTGCACACAATCAAACAGAGTCTGTCACTGAGTCATTAG 3060 0.4075 MAVILFMFILSVVSQNLVHMMPRTVALSLSSESDKLALLALKLKLTKGVPNALPSWNSSLHVCEWKGVACGQRHMRVSVLHLENQTWGGTLGPSLGNLSFLTTLILYNIDLYGEIPTQIGQLKRLQLLDLSHNNLNGQIPTHLTNCSKLEVISLLENKLTGKIPSWFGSGSMTRLKQLFLGANDLVGTIPPSLGNLSSLQNISVKGNHLVGSIPHVLGQLSNLKKLDLGSNSLSGVVPYSLYNLSGIQSLALDENQLSGTFPSKMQLVFPNLRAFLVGGNQFNGTFPSSVFNITGLEKFDISSNGFSGSIPPTLGTLNKLQLFHIAYNSFGSGRARDLDFLSSLTNCTHLRILILDGNGFGGDLPRLIGNFSTNLNILSMGSNQISGTIPEGIWQLIGLADITMQTNYLVGTVPDSIVRLKNLVRLDLAENKLSGNIPTAIGNLTMLSELYLYRNRFVGDIPLTLKYCMRMQTIGVSTNNLNGDIPNQTFGNFEGLTKLDLSYNSFTGSIPSDIGNLKHLFGLYLRGNKLSGELPQELGACYGLTELALESNFFRGSIPSFLGSLGSLEFLDLSNNNFSSTIPVELQKLSYLNALNLSFNHLYGEVPTGGVFNNVTEISLIGNKDLCGGIPQLKLPACSKLSSKKHKWSFKTKLILIIAIVVGVGLVTSTLFISIYLFRKRPITPKTPSTSCSHKNKYVKVSYGDLHKATNGFSSSNLVGSGSFGSVYSGSLLPFETPIAVKVLNLEIGGASKSFAAECKALGRIMHRNLVNILTCCSSIDYNGKDFKAIVFEFMPNGTLESLLHDKVEPKSKNLSLNLDLVVNIALDVANALDYLHHDFEEAVVHCDIKPSNVLLDDEMVAHLGDFGLARLLHVATGHSSRDEVSSSAIRGTFGYIPPEYGTGCRVSAKGDMYSYGILVLEMVTGRKPTDSMFGEGLSLHKFCEMAIPEGITEIVDSRLLVPNAAEGRKVMESKIRKCLVALARIGVGCSAELPVERMDIKDVVLELHTIKQSLSLSH 1019
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g02311 1019 Gene3D Ribonuclease Inhibitor 170 336 IPR032675 -
Viun8g02311 1019 Pfam Leucine rich repeat 544 602 IPR001611 GO:0005515
Viun8g02311 1019 Pfam Leucine rich repeat 198 257 IPR001611 GO:0005515
Viun8g02311 1019 Pfam Leucine rich repeat 472 530 IPR001611 GO:0005515
Viun8g02311 1019 Pfam Protein kinase domain 715 945 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun8g02311 1019 SMART LRR_sd22_2 420 446 - -
Viun8g02311 1019 SMART LRR_sd22_2 172 204 - -
Viun8g02311 1019 SMART LRR_sd22_2 220 246 - -
Viun8g02311 1019 SMART LRR_sd22_2 372 395 - -
Viun8g02311 1019 SMART LRR_sd22_2 122 148 - -
Viun8g02311 1019 SMART LRR_sd22_2 565 594 - -
Viun8g02311 1019 SUPERFAMILY L domain-like 31 328 - -
Viun8g02311 1019 FunFam LRR receptor-like serine/threonine-protein kinase EFR 685 794 - -
Viun8g02311 1019 SUPERFAMILY RNI-like 269 608 - -
Viun8g02311 1019 PRINTS Leucine-rich repeat signature 125 138 - -
Viun8g02311 1019 PRINTS Leucine-rich repeat signature 220 233 - -
Viun8g02311 1019 SMART LRR_typ_2 565 588 IPR003591 -
Viun8g02311 1019 SMART LRR_typ_2 517 541 IPR003591 -
Viun8g02311 1019 SMART LRR_typ_2 220 243 IPR003591 -
Viun8g02311 1019 SMART LRR_typ_2 420 444 IPR003591 -
Viun8g02311 1019 SMART LRR_typ_2 122 146 IPR003591 -
Viun8g02311 1019 SMART LRR_typ_2 172 196 IPR003591 -
Viun8g02311 1019 SMART LRR_typ_2 373 396 IPR003591 -
Viun8g02311 1019 ProSitePatterns Protein kinases ATP-binding region signature. 719 742 IPR017441 GO:0005524
Viun8g02311 1019 ProSiteProfiles Leucine-rich repeat profile. 567 588 IPR001611 GO:0005515
Viun8g02311 1019 SMART serkin_6 713 980 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun8g02311 1019 Gene3D Ribonuclease Inhibitor 337 647 IPR032675 -
Viun8g02311 1019 Gene3D Phosphorylase Kinase; domain 1 678 794 - -
Viun8g02311 1019 SUPERFAMILY Protein kinase-like (PK-like) 689 1008 IPR011009 -
Viun8g02311 1019 ProSitePatterns Serine/Threonine protein kinases active-site signature. 844 856 IPR008271 GO:0004672|GO:0006468
Viun8g02311 1019 Gene3D Transferase(Phosphotransferase) domain 1 795 1018 - -
Viun8g02311 1019 Pfam Leucine rich repeat N-terminal domain 32 70 IPR013210 -
Viun8g02311 1019 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 795 1019 - -
Viun8g02311 1019 FunFam LRR receptor-like serine/threonine-protein kinase EFR 338 644 - -
Viun8g02311 1019 Gene3D Ribonuclease Inhibitor 31 169 IPR032675 -
Viun8g02311 1019 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 71 337 - -
Viun8g02311 1019 PANTHER OS04G0122200 PROTEIN 218 1012 - -
Viun8g02311 1019 ProSiteProfiles Protein kinase domain profile. 713 1012 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g02311 Viun-Chr8 33099844 33103268 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g02311 29 1013 Receptor kinase-like Gene Family AT3G47570 44.713 0.0 772
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Viun8g02311 Pkinase 5.8e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g02311 - - gmx:100777490 1449.49