Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g02309 ATGGCTCTAACAGTAGTACTGTTTCTTCTCAGTGTTGTTTCACAAACCTTGGTGTACACGACACCAGCTACGGTTGCTCTTGTTTTGAGTTCAGAGAGTGATAAGGTAGCTTTGCTTGCCTTGAAGAAGAAGCTTATCAATGGAGTGCCTAATTCTCTTCCATCATGGAACCACTCTTTGCATTTATGTGAGTGGCAGGGTGTAACATGCAGTCGCGGCCACATCAGAGTCTCTGTCTTGCACTTGAAAAATCAGAACTGGAATGGTACTCTTGGACCATCCTTGGGAAATCTAACGTTCCTCAGAGCCCTCATTCTTTCCAACATCAACATGCATGGTGAAATTCCGACACAAATTGGTCGACTAAAGAGGTTGCAGCTTCTTGACTTGAGCAACAACAATATAAATGGTGAGATTCCTATGTACCTTACCAACTGCTCTAAACTTGAGGTCATTAACTTGTTGTACAACAAACTCAATGGAAAAATTCCCTCCTGGTTTGGACTTGGATCCATGACACGGCTTAATAAGTTGCTTCTTGGTGCCAATGATCTAGTTGGTACTATCCCACCTTCCTTGGGGAATCTTTCATCCCTCCAAAATATCACAGTGGCAAGAAATCATTTGGTGGGAAGTATACCACATGTTTTGGGTCGGTTATCAAATTTGAAAGAGCTGAATTTTGGTTTAAATGATTTTTCAGGAGTAGTGCCTGATTCTCTTTATAACCTTTCCAATATTCAAATTTTTGTTTTCGGGGTAAACCGGTTATCTGGTACTTTTCCACCAAACATGCAACTTGCTTTTCCAAACCTTCGAGCATTCTTGGTTGGAGGGAACCAGTTCAGTGGAACTTTCCCGTCTTCAATATCCAACATCACCGGATTGCAAGCGTTTGAGATCTCCTCAAACGGTTTAAGTGGACCAATTCCTCCCACTTTGGGAACCTTAAAGAGACTTCAGACGTTTCACATTGCGTACAACAGTTTTGGAACAGGGACAGCCAGTGATTTGGATTTCCTTTCATCATTAACCAATTGCACTCAATTGCGCCTACTTCTTTTGGATGGTAATGGATTTGGTGGCGTGGTTCCAGATCTCATAGGCAATTTTTCTACCCACCTGACAACTCTTAGTATGGGGTTGAATCGAATATCTGGAATGATACCTGATGAAATTGGACAGCTAATCGGTTTAATCGACTTCGTGGTGGCAGATAATTATCTGGAGGGAACTGTCCCAGATTCGATTGGAAGGCTTAAAAATCTAGTAAGATTGGCCCTGCAAGAAAACAAATTGTCTGGTAATATTCCTACTGCCATCGGCAATCTTACTATGTTGTCTGAACTTTATCTGCACACAAATAGATTCGTTGGAGACATTCCATTTAGCCTTAAATACTGCATACGAATGCAGTCATTTGGTGTTTCCACCAACAACTTGAATGGAGATATCCCTAATCAAACATTTGGCAATTTGGAGGGTTTGGTAAATCTTGACTTATACAATTCTTTCACTGGTTCCATCCCTTCAGAGTTTGGAAACTTGAAGCACCTTTCCGTATTATATCTTCAAGGAAACAAATTTTCTGGTGAAATGCCCAAAGAGCTTGGCGCTTGTTCCGGGTTAACAGAGCTTGTGTTGCAGAGTAACTTCTTCTGCGGAAGCATTCCTTCGTTCTTGGGCTCTTTAGGATCCCTTGAATTCCTAGATCTTTCTAACAACAACTTCTCAAGCACAATCCCTGTAGAATTACAAAAGTTGAGTTATTTGAATACTTTGAACTTGTCTTTTAACCATCTTTATGGTGAGGTTCCCACCGAAGGTGTCTTTAATAATGTTACAGCAATTTCACTCATCGGAAATAAGGATCTCTGTGGCGGAATACCTCAACTGAAGCTTCCTGAATGTTCTCAGTTGCCCTCAAAGAAACACAAGAGGTCTTTCAGAAAGAAACTCATCCTCATCACTGCAATTGTCGTTGGAGTGGGTTTGGTTTCTTCAACGCTGTTTATCAGCATCTATTTGTTCAGGAAAAGGCCCAAAACACCATCGACTTCATGTTCTCCTAAAAACAAGTACGTAAAGGTTTCATATGGAGAGCTGCATAAAGCAACCAATGGATTTTCTTCATCCAATTTGGTAGGGTCTGGAGGCTTTGGTTCTGTATATAGTGGATCTCTTCTCCCTTTCAAGACACCTATAGCTGTGAAAGTATTGAATCTTGAAACAGTTGGGGCATCAAAGAGTTTCGCAGCTGAGTGCAAGGCTCTAGGAAGGATCGTGCATCGGAATCTTCTCAACATCTTGACTTGTTGTTCAAGTATTGATTATAACGGTAAAGATTTCAAGGCTATAGTTTTTGAATTCATGCCTAATGGCAGTCTAGAAAGTTTGCTGCACGACAACGTTGAGCCCGAGTCGAGAAATTTCAGTCTCAACCTTGATCTTGTGGTAAATATTGCTCTTGATGTTGCCAATGCATTGGATTATCTTCATCATGGTTCTGAGGAAGCTGTAGTTCACTGTGATATTAAGCCAAGCAATGTTCTTCTTGATGATGACATGGTTGCTCACTTGGGTGATTTTGGGTTAGCAAGACTCCTTCATGTGGCAACGGGAAATTCCAGCAGAGATCAAGTTAGTTCCTCTGCAATTAGAGGAACCATTGGATATGTTCCACCAGAGTACGGAACAGGTTGTCGAGTATCAATTAAAGGAGATATGTACAGCTACGGAATTCTTGTGTTAGAGATGGTGACAGGGAGGAGACCAACAGATGCAATGTTTGGTGAAGGTGCAAGTCTACACAAATTCTGCGAAATGGCAATTCCAGAAGGGGTCACTGAGATAGCAGATTCACGTTTGCTTGTACCAGTTGTTGAAGAAGGAAGAAGGATGATGGAAATAAAAATTAGGGAGTGTTTGGTGGGCTTAGCAAGGATTGGAGTTGAATGTTCTGCAGAATTAGCTGTTGATCGAATGGACATAAAAGATGTGGTACTGGAACTGCACTCAATCAAACAGAGGCTGTGTCACTGA 3042 0.4142 MALTVVLFLLSVVSQTLVYTTPATVALVLSSESDKVALLALKKKLINGVPNSLPSWNHSLHLCEWQGVTCSRGHIRVSVLHLKNQNWNGTLGPSLGNLTFLRALILSNINMHGEIPTQIGRLKRLQLLDLSNNNINGEIPMYLTNCSKLEVINLLYNKLNGKIPSWFGLGSMTRLNKLLLGANDLVGTIPPSLGNLSSLQNITVARNHLVGSIPHVLGRLSNLKELNFGLNDFSGVVPDSLYNLSNIQIFVFGVNRLSGTFPPNMQLAFPNLRAFLVGGNQFSGTFPSSISNITGLQAFEISSNGLSGPIPPTLGTLKRLQTFHIAYNSFGTGTASDLDFLSSLTNCTQLRLLLLDGNGFGGVVPDLIGNFSTHLTTLSMGLNRISGMIPDEIGQLIGLIDFVVADNYLEGTVPDSIGRLKNLVRLALQENKLSGNIPTAIGNLTMLSELYLHTNRFVGDIPFSLKYCIRMQSFGVSTNNLNGDIPNQTFGNLEGLVNLDLYNSFTGSIPSEFGNLKHLSVLYLQGNKFSGEMPKELGACSGLTELVLQSNFFCGSIPSFLGSLGSLEFLDLSNNNFSSTIPVELQKLSYLNTLNLSFNHLYGEVPTEGVFNNVTAISLIGNKDLCGGIPQLKLPECSQLPSKKHKRSFRKKLILITAIVVGVGLVSSTLFISIYLFRKRPKTPSTSCSPKNKYVKVSYGELHKATNGFSSSNLVGSGGFGSVYSGSLLPFKTPIAVKVLNLETVGASKSFAAECKALGRIVHRNLLNILTCCSSIDYNGKDFKAIVFEFMPNGSLESLLHDNVEPESRNFSLNLDLVVNIALDVANALDYLHHGSEEAVVHCDIKPSNVLLDDDMVAHLGDFGLARLLHVATGNSSRDQVSSSAIRGTIGYVPPEYGTGCRVSIKGDMYSYGILVLEMVTGRRPTDAMFGEGASLHKFCEMAIPEGVTEIADSRLLVPVVEEGRRMMEIKIRECLVGLARIGVECSAELAVDRMDIKDVVLELHSIKQRLCH 1013
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g02309 1013 ProSitePatterns Protein kinases ATP-binding region signature. 715 738 IPR017441 GO:0005524
Viun8g02309 1013 Gene3D Ribonuclease Inhibitor 169 335 IPR032675 -
Viun8g02309 1013 ProSitePatterns Serine/Threonine protein kinases active-site signature. 840 852 IPR008271 GO:0004672|GO:0006468
Viun8g02309 1013 SMART LRR_typ_2 122 146 IPR003591 -
Viun8g02309 1013 SMART LRR_typ_2 172 196 IPR003591 -
Viun8g02309 1013 SMART LRR_typ_2 564 587 IPR003591 -
Viun8g02309 1013 SMART LRR_typ_2 516 540 IPR003591 -
Viun8g02309 1013 SMART LRR_typ_2 220 243 IPR003591 -
Viun8g02309 1013 SMART LRR_typ_2 420 444 IPR003591 -
Viun8g02309 1013 SMART LRR_typ_2 588 613 IPR003591 -
Viun8g02309 1013 Pfam Leucine rich repeat N-terminal domain 32 71 IPR013210 -
Viun8g02309 1013 FunFam Inactive leucine-rich repeat receptor-like protein kinase 346 637 - -
Viun8g02309 1013 Gene3D Phosphorylase Kinase; domain 1 689 790 - -
Viun8g02309 1013 FunFam Leucine-rich repeat receptor protein kinase EMS1 167 264 - -
Viun8g02309 1013 Gene3D Ribonuclease Inhibitor 30 168 IPR032675 -
Viun8g02309 1013 ProSiteProfiles Protein kinase domain profile. 709 1013 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun8g02309 1013 PANTHER RECEPTOR-LIKE PROTEIN 55 344 1009 - -
Viun8g02309 1013 FunFam Lrr receptor-like serinethreonine-protein kinase gso2 267 345 - -
Viun8g02309 1013 SUPERFAMILY Protein kinase-like (PK-like) 683 1002 IPR011009 -
Viun8g02309 1013 FunFam LRR receptor-like serine/threonine-protein kinase EFR 680 790 - -
Viun8g02309 1013 Pfam Protein kinase domain 711 937 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun8g02309 1013 Gene3D Ribonuclease Inhibitor 336 646 IPR032675 -
Viun8g02309 1013 SUPERFAMILY L domain-like 338 618 - -
Viun8g02309 1013 ProSiteProfiles Leucine-rich repeat profile. 566 587 IPR001611 GO:0005515
Viun8g02309 1013 SUPERFAMILY L domain-like 31 330 - -
Viun8g02309 1013 SMART serkin_6 709 976 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun8g02309 1013 Gene3D Transferase(Phosphotransferase) domain 1 791 1012 - -
Viun8g02309 1013 FunFam Leucine-rich repeat receptor-like kinase 35 147 - -
Viun8g02309 1013 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 791 1013 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g02309 Viun-Chr8 33083466 33086621 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g02309 29 1011 Receptor kinase-like Gene Family AT3G47570 44.411 0.0 768
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Viun8g02309 Pkinase 9.3e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g02309 - - gmx:100777490 1510.35