Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g02293 ATGGACGAGGGCATGTCAGGCTTTTGCATCAGATCAGGGAGTGTTCGTGGAAAAAGTGGGAGCACTACTTCTTCTGCCACTGGCACCAAGTGTGGGCGTTGGAATCCCACAACAGAACAAGTTAAACTTCTGACCGAACTCTTCAGGTCAGGGCTCCGAACCCCAAGCACCGACCAGATTCAAAAGATCTCCACTCAGCTCAGCTTTTATGGTAAGATAGAGAGCAAGAATGTCTTCTATTGGTTTCAGAACCATAAGGCCAGGGAGAGACAGAAGCGCCGCAAGGTTTCCTTTGACGACAACGATGTCGTCATTCGTAGACAAAACTCCTTCAACACTTCCTCACAAAGTCTTGCTGACATGTATCGAGTTTCAGAGCCAGATAGGGTGGTTGAGACGCTTCAACTCTTTCCCATAAACTCCTTCGATGAATCTGAACCAGAGACTCTGCGGTTACATGCAAATAATAGTACAGTGTTTTCATACACGATGGATGAACAGATAGAGCACCCACCATTGGACCTGCGCTTGAGCTTTCTGTAA 543 0.4715 MDEGMSGFCIRSGSVRGKSGSTTSSATGTKCGRWNPTTEQVKLLTELFRSGLRTPSTDQIQKISTQLSFYGKIESKNVFYWFQNHKARERQKRRKVSFDDNDVVIRRQNSFNTSSQSLADMYRVSEPDRVVETLQLFPINSFDESEPETLRLHANNSTVFSYTMDEQIEHPPLDLRLSFL 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g02293 180 Pfam Homeodomain 31 91 IPR001356 GO:0003677
Viun8g02293 180 Gene3D - 30 98 - -
Viun8g02293 180 CDD homeodomain 33 93 IPR001356 GO:0003677
Viun8g02293 180 SUPERFAMILY Homeodomain-like 32 94 IPR009057 -
Viun8g02293 180 ProSiteProfiles 'Homeobox' domain profile. 27 92 IPR001356 GO:0003677
Viun8g02293 180 FunFam WUSCHEL-related homeobox 11 30 98 - -
Viun8g02293 180 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 18 110 IPR044555 GO:0003700|GO:0099402
Viun8g02293 180 SMART HOX_1 29 96 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g02293 Viun-Chr8 32968773 32969704 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g02293 8 180 Wox Gene Family AT3G11260 53.368 9.20e-61 185
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Viun8g02293 Homeodomain 5.9e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g02293 - - pvu:PHAVU_008G226100g 319.701
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun8g02293 8 32968773 32969704 Viun8g02293 8 32968773 32969704 ECH