Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g02277 ATGGTTAAAGGACGCCAAGGTGAACGTGTCAGGTCCAAGTCAAATCAGTACCCAAATACTTCTCTCATCCAGATTGAGAATGTAAACTCCAAGGAAGAAGTTGCGTGGTACGCTGGGAAGCGCATGGCTTACATTTACAAGGCCAAGGTAAAGAAGAACGGAAGCCACTATCGATGCATTTGGGGTAAGGTCACCAGACCTCATGGTAACAGTGGTGTCGTTAGAGCTAAGTTCAAGTCTAATCTGCCGCCAAGATCGATGGGAGCAAGGGTTAGAGTGTTTATGTATCCAAGCAATATATGA 303 0.4554 MVKGRQGERVRSKSNQYPNTSLIQIENVNSKEEVAWYAGKRMAYIYKAKVKKNGSHYRCIWGKVTRPHGNSGVVRAKFKSNLPPRSMGARVRVFMYPSNI 100
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g02277 100 Pfam Ribosomal protein L35Ae 11 94 IPR001780 GO:0003735|GO:0005840|GO:0006412
Viun8g02277 100 ProSitePatterns Ribosomal protein L35Ae signature. 62 83 IPR018266 GO:0003735|GO:0005840|GO:0006412
Viun8g02277 100 Gene3D translation elongation factor selb, chain A, domain 4 1 100 IPR038661 -
Viun8g02277 100 FunFam 60S ribosomal protein L35a 1 100 - -
Viun8g02277 100 SUPERFAMILY Translation proteins 8 94 IPR009000 -
Viun8g02277 100 Hamap 50S ribosomal protein L35Ae [rpl35ae]. 2 94 IPR001780 GO:0003735|GO:0005840|GO:0006412
Viun8g02277 100 PANTHER 60S RIBOSOMAL PROTEIN L35A 8 100 IPR001780 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g02277 Viun-Chr8 32839118 32841802 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g02277 1 100 Cytoplasmic Ribosomal Protein Gene Family AT1G74270 80.357 8.06e-62 182
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g02277 K02917 - gmx:100499746 196.052
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun8g02277 8 32839118 32841802 Viun8g02277 8 32839118 32841802 ECH