Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g02258 ATGGTCTCTTTAAGGCTATGCCTTCTTTTCATTCTTCTCTGCATCACAATTATTGAACATGCACATTCCAACAATGATAGGAAGACTTACATTGTCTACATGGGTGATCACCCTAAGGGCGTGGACCTCACTTCCGTACCTTCTCTTCATTCCACCATGGCTCAAAAAGTCCTTGGCAGCGATTTCAAACCCGAAGCTGTAATCCACAGCTACAAGAACTTTAATGCGTTCGTGATGAAGTTAACAGAAGAGGAGGCTAAGAGAATGGCAGAAATGGAGAACGTTGTCTCTGTTTTCCCAAACGGCAAGAATCGTCTTCACACAACAAGGTCGTGGAACTTCTTAAATTTTCCCCAGAATGTTAACAGAGAAACCTCGGAGAGTGACATAATTGTGGGAGTCATAGACAGTGGTATTTGGCCCGAGTCTGAAAGCTTCAGTGACAAAGGGTTTGGTCCTCCACCAGCCAAATGGAAAGGCTCATGTCATAACTTTACCTGCAACAACAAAATAATTGGCGCAAAGTACTTCAATCTGGAGAACGAGTTTGCAAAAGATGATATAATATCTCCAAGAGATGCAGAAGGTCATGGATCGCATTGTTCATCCACAGTTGCCGGAAACTCGGTTAACTCAGTGAGTGTATTTGGGTTAGCCTCGGGAACTGCCCGTGGGGGAGTGCCATCTGCCCGAATCGCCATGTACAAAGTATGTTGGAAGACAGGGAGTTGTGGCGATGCTGACACGCTTGCAGCATTTGATGAAGCTATTAGTGATGGAGTAGACGTTATTTCTATTTCAACAGGACTCGGAGGAATAGTCCACATTCCGTATTTCCAAGATTCAAATAACATAGGAAGTTTTCATGCAATGAAAAAAGGGATACTAACCTCAAATTCTGCCAATAATTTGGGTCCTGGTCTTTACTCGATGACAAATTATCCACCTTGGTTACTCTCTGTGGCTGCTAGCGCTTTCGACAGAAAGATTATCACCAAGGTGAAGTTGGGCACTGGCGCGGTTTATGAGGGGGTTTCGATCAACACATTTGATCTTAAGGGAAAAGCGTATCCACTTGTGTATGGTGGGGATGTACCTAACGTTGCTGGTGGACATAACAGCTCGACATCCAGGTTTTGCGAAAAGGACTCTTTGGATAAACATTCAGTAAAGGGAAAGATTGTTCTGTGTGAAAGCATTCAGAGTTCTGAAGATGTAGGGTTTTTATCTGGGGCAGCTGGTGTTATATTTGGAAATAATTACCCTAAAGATTTGCCTGGAGCATATGCATTGCCTGCTTTGGAGATTACTCAGTGGGATCAAAGACTCATACATTCTTATTTGAAGTCAAACAGAAATGCAACAGCAACAATATTTAAGAGTGAAGAAGTAAACGATGGACTAATTCCTTTCATAGCTTCATTCTCCTCAAGAGGTCCAAATCCAATCACACCAAATACTCTAAAGCCTGACATTGCTGCTCCTGGAGTTGAAGTTATAGCTGCATGGTCTCCAATTGACCCTATTTCAGATGTTAAAGGTGACAAAAGAAAAGTACAATATAATGTAATCTCAGGCACTTCAATGGCTTGCCCACATGCCACTGCAGCAGCTGCATATGTCAAATCATTTCACCCCAATTGGTCTCCTGCCATGATCAAGTCTGCATTGATGACCACCGCTACACCAATGAGTCGTACTCTTAACCCTGAAGCAGAATTTGCATACGGAGCTGGGCTTATTAATCCTGCTAAGGCCGCAAATCCTGGTTTAGTGTATGATATTAATGAAGCAGATTATGTTAAGTTCTTGTGTGGAGAAGGGTTCACAGATAAACAGCTTCGAGTCCTAACTGAAGATCACAGTAGTTGCAAAGGACAAGCAAGCAAGAAAGCTGTGTATGAATTAAACCTTCCATCATTTTCTCTCTTTGTAAATGGCTCAGATTTTAGTAGTGCTTATCGAAGAACCGTTACAAACGTGGGATCCAAAACATCTACGTACAAAGCCAGAGTAATTGCTCCATCTTTGTTAAATATTCAAGTGAAACCCAGGACTCTTTCCTTCACATCTATTGGCCAGAAAAAGTCATTTTATGTGATAATTCAAGGGAGAATTAATGTGGCAATACTCTCTGCTTCTCTGATTTGGGATGATGGAAATCATCAAGTTAGAAGCCCAATTGTAGTGTATGGGATCGTAGGTTGA 2208 0.4207 MVSLRLCLLFILLCITIIEHAHSNNDRKTYIVYMGDHPKGVDLTSVPSLHSTMAQKVLGSDFKPEAVIHSYKNFNAFVMKLTEEEAKRMAEMENVVSVFPNGKNRLHTTRSWNFLNFPQNVNRETSESDIIVGVIDSGIWPESESFSDKGFGPPPAKWKGSCHNFTCNNKIIGAKYFNLENEFAKDDIISPRDAEGHGSHCSSTVAGNSVNSVSVFGLASGTARGGVPSARIAMYKVCWKTGSCGDADTLAAFDEAISDGVDVISISTGLGGIVHIPYFQDSNNIGSFHAMKKGILTSNSANNLGPGLYSMTNYPPWLLSVAASAFDRKIITKVKLGTGAVYEGVSINTFDLKGKAYPLVYGGDVPNVAGGHNSSTSRFCEKDSLDKHSVKGKIVLCESIQSSEDVGFLSGAAGVIFGNNYPKDLPGAYALPALEITQWDQRLIHSYLKSNRNATATIFKSEEVNDGLIPFIASFSSRGPNPITPNTLKPDIAAPGVEVIAAWSPIDPISDVKGDKRKVQYNVISGTSMACPHATAAAAYVKSFHPNWSPAMIKSALMTTATPMSRTLNPEAEFAYGAGLINPAKAANPGLVYDINEADYVKFLCGEGFTDKQLRVLTEDHSSCKGQASKKAVYELNLPSFSLFVNGSDFSSAYRRTVTNVGSKTSTYKARVIAPSLLNIQVKPRTLSFTSIGQKKSFYVIIQGRINVAILSASLIWDDGNHQVRSPIVVYGIVG 735
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g02258 735 Gene3D Peptidase S8/S53 domain 129 600 IPR036852 GO:0004252|GO:0006508
Viun8g02258 735 Gene3D - 327 465 - -
Viun8g02258 735 CDD PA_subtilisin_like 334 458 - -
Viun8g02258 735 ProSitePatterns Serine proteases, subtilase family, serine active site. 526 536 IPR023828 -
Viun8g02258 735 SUPERFAMILY Subtilisin-like 106 591 IPR036852 GO:0004252|GO:0006508
Viun8g02258 735 Pfam Subtilase family 128 579 IPR000209 GO:0006508|GO:0008236
Viun8g02258 735 PRINTS Subtilisin serine protease family (S8) signature 193 206 IPR015500 -
Viun8g02258 735 PRINTS Subtilisin serine protease family (S8) signature 525 541 IPR015500 -
Viun8g02258 735 PRINTS Subtilisin serine protease family (S8) signature 127 146 IPR015500 -
Viun8g02258 735 CDD Peptidases_S8_3 106 562 IPR034197 -
Viun8g02258 735 Gene3D - 604 733 - -
Viun8g02258 735 Pfam Peptidase inhibitor I9 29 107 IPR010259 -
Viun8g02258 735 ProSiteProfiles Serine proteases, subtilase domain profile. 111 587 - -
Viun8g02258 735 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 30 730 IPR045051 -
Viun8g02258 735 Pfam Fibronectin type-III domain 635 730 IPR041469 -
Viun8g02258 735 FunFam Subtilisin-like protease SBT1.5 129 338 - -
Viun8g02258 735 ProSitePatterns Serine proteases, subtilase family, histidine active site. 197 207 IPR022398 -
Viun8g02258 735 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 15 107 IPR037045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g02258 Viun-Chr8 32659316 32664067 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g02258 3 731 Subtilisin-like Serine Gene Family AT3G46850 46.649 0.0 630
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g02258 - - gmx:100815516 1265.75