Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g02257 ATGACGAACAAAATGAGTGCAGTGTTTGTGATGGGATTTGTCTTCTTAAGCCTTATCTCAATTACATCTGCTATCTCTGGAACTGCAACTAACTACAAAGTTTACAAACCTTCTGCATGCTACGGCAATCAAGACGAGGGAACGATGATAGCTGCTGCAAGCGACGCAATGTATGCGAACGGGGCTGCATGTGGCCAAATGTATAAGATCTCGTGCACAGGTGCCACCAACCAAGGTGTGCCTCAGCCATGTAAGGGTGGCAGTGTTACTGTGAAGATTGTTGATCGTTGTCCTTCCCCAGGTTGCCAAGCCACCATTGATCTCTCTCAAGAAGCTTTCTCTGCAATCGCTGACCTCAATGCTGGAAAAATTCAAATTGAATACAACAGGGTGTAA 396 0.4571 MTNKMSAVFVMGFVFLSLISITSAISGTATNYKVYKPSACYGNQDEGTMIAAASDAMYANGAACGQMYKISCTGATNQGVPQPCKGGSVTVKIVDRCPSPGCQATIDLSQEAFSAIADLNAGKIQIEYNRV 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g02257 131 CDD DPBB_EG45-like 25 129 - -
Viun8g02257 131 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 27 131 IPR007112 -
Viun8g02257 131 FunFam Barwin-related endoglucanase 24 130 - -
Viun8g02257 131 SUPERFAMILY Barwin-like endoglucanases 13 131 IPR036908 -
Viun8g02257 131 SMART dpbb_1 50 128 IPR007112 -
Viun8g02257 131 Gene3D - 23 131 IPR036908 -
Viun8g02257 131 PANTHER EG45-LIKE DOMAIN CONTAINING PROTEIN 1-RELATED 4 130 IPR044206 GO:0009627|GO:0048046
Viun8g02257 131 Pfam Lytic transglycolase 51 128 IPR009009 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g02257 41 131 Expansin Gene Family AT5G56320 33.962 1.25e-09 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g02257 - - ahf:112743758 197.593