Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g02255 ATGAAGACTTTAGGGTTGTGGCATCTCCTACAAATTCTTACATGCATTCTGCTACTTACTCCCTCATTTTCTAAAGATGATAGAAAGATTTACATAGTGTACATGGGCGAACATCCGAAGGGCATGGAACAGACAGAATCACTTCATACTAGTATGATTCAAAGTGTCATCAGCAGAAAACTTGCACCAGACACTTTGGTGCACAGCTACAAGAGTTTCAATGGATTTGTGGCCAGGCTGACCAAAGAAGAATCAGAAAGAATGAAAGGAATGGATGATGTGGTTTCTGTTATTCCAAACAGAGTCCACAGTATCCAAACATCAAGGTCCTGGAACTTCATTGGCTTCCCTGAAAATGTGCAAAGATCAAAGGTAGAAAGTAACGTAATTGTTGGAGTACTGGATACTGGAATTTGGCCTAATTCCTCAAGCTTCACCGACGGAGGTTTTGGTCCACCACCACAGAAATGGAAAGGAACATGCCAGAACATCACCTGCAATAACAAAATAATCGGAGCAAAATATTTTGGTCTTGGGAGTGAATTCGGGCAAGACGACACAATTGATACGATTGGTCACGGGTCTCACACTGCATCCACTGCTGCTGGAAACTCGGTAAAGAATGCAAATATGTTTGGGCTTGGGTCAGGAACAGCAAGAGGAGGAGTTCCATCAGCACGCATTGCTGTGTATAAAGTGTGTTGGAGAAGTGGTTGTAGAGGTGCTGATATTCTTGCAGGGTTTGATGAAGCCATTATGGATGGTGTTGACATTATATCTATTTCATTGGGACCTAGCGTCGCCAGATTCATCGATTATTTTGAAGATGAATTTGCAATAGGAGCCTTCCATGCAATGAAGAGAGGAATATTAACTTCTAAAGCTGCAGGCAATGGGGGTCCCGACCGTTACACAATGACAAATCCTGCTCCCTGGATAATTTCTGTGGCTGCCACCACTATAGACAGAAAGTTTTTAACCAAACTCCACCTGGGCAATGGCCGAATCTTCCAGGGAGTGTCATTGAATATGTTTAGTCCAACACAGAAAAGTTACCCTTTAATTTATGCGGGAGATGCAGCAGCTCGTCGATTTGGTAGTTCTTTGTCCAGGTTTTGTTTTGAAAATACTTTGGATGGAGCTCTGGTAAAAGGGAAAATTGTTTTGTGTGATGGCTACACTCCTCCTCAATATGTGGGATTTGCTTCTGGAGCTGCTGGTCTTATATTCACTAGTACATTGACTCTAGTTGGACTAGATGTATATACATTGCCAACAATTCACATTAACGAGAGTGATGGGAATTCCGTAACTTCTTATTTAAAGTCAACAAGTAATCCAACAGCAACCATATTCAGGAGTTACGAAGAAAAAGATTCATCAGCCCCTTACGTTGCTCCTTTCTCCTCAAGAGGTCCAAATATTGTCACTCCAAACATTCTTAAGCCTGATATAGCAGCTCCAGGAGTTGACATTTTGGCTGCATGGTCTCCGGTTTCTTCAATTTCTGGTGTTAAAGGAGATAAAAGAGCATCGAATTTCATTATAATATCTGGAACTTCCATGGCATGCCCTCATGTTACTGGAGCAGCTGCTTACGTCAAATCTTTTCATCCCAATTGGTCTCCTGCTGCAATAAAATCCGCCTTGATGACAACTGCTACCCCTATGAATCCTGCACGTAATCCAGACGCTGAATTTGCTTACGGTGCGGGCCAAATCAATCCTTTGAAGGCGGCAAATCCTGGACTGGTTTATGATGCTGATGAAAATGATTATATTAGTTTTCTGTGTGGACAAGGTTACAATTCAACATCGCTGCAAAAAGTTACAGGAGATAACAGCACTTGTACATCAGCAAATAAAGGATCGGTTTTGGACCTTAATCTCCCATCTTTTGCTCTATCAACCCCTCGCTCAAGCCACAACAATGTCACTTTTGGTAGAACTGTCACAAATGTTGGATCAGGTACATCCAAATATAAGGCCACAGTAAGTGCACATCCATCTTCTTTAAACGTGGAAGTAGTGCCAAATGTTTTGACCTTCTCATCGTTGGGTCAGAAGCTGTCCTTTACCCTTAGGATTGAAGGAAGCATTAATGCAGACTTTGTTTCTTTTTCCTTGATTTGGGATGATGGCACTTTCAAGGCAAGGAGTCCCGTTGTTGTTTATGTTCCATAA 2184 0.4199 MKTLGLWHLLQILTCILLLTPSFSKDDRKIYIVYMGEHPKGMEQTESLHTSMIQSVISRKLAPDTLVHSYKSFNGFVARLTKEESERMKGMDDVVSVIPNRVHSIQTSRSWNFIGFPENVQRSKVESNVIVGVLDTGIWPNSSSFTDGGFGPPPQKWKGTCQNITCNNKIIGAKYFGLGSEFGQDDTIDTIGHGSHTASTAAGNSVKNANMFGLGSGTARGGVPSARIAVYKVCWRSGCRGADILAGFDEAIMDGVDIISISLGPSVARFIDYFEDEFAIGAFHAMKRGILTSKAAGNGGPDRYTMTNPAPWIISVAATTIDRKFLTKLHLGNGRIFQGVSLNMFSPTQKSYPLIYAGDAAARRFGSSLSRFCFENTLDGALVKGKIVLCDGYTPPQYVGFASGAAGLIFTSTLTLVGLDVYTLPTIHINESDGNSVTSYLKSTSNPTATIFRSYEEKDSSAPYVAPFSSRGPNIVTPNILKPDIAAPGVDILAAWSPVSSISGVKGDKRASNFIIISGTSMACPHVTGAAAYVKSFHPNWSPAAIKSALMTTATPMNPARNPDAEFAYGAGQINPLKAANPGLVYDADENDYISFLCGQGYNSTSLQKVTGDNSTCTSANKGSVLDLNLPSFALSTPRSSHNNVTFGRTVTNVGSGTSKYKATVSAHPSSLNVEVVPNVLTFSSLGQKLSFTLRIEGSINADFVSFSLIWDDGTFKARSPVVVYVP 727
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g02255 727 Gene3D - 597 726 - -
Viun8g02255 727 FunFam Subtilisin-like protease SBT1.5 128 336 - -
Viun8g02255 727 ProSiteProfiles Serine proteases, subtilase domain profile. 110 580 - -
Viun8g02255 727 SUPERFAMILY Subtilisin-like 106 584 IPR036852 GO:0004252|GO:0006508
Viun8g02255 727 CDD PA_subtilisin_like 331 451 - -
Viun8g02255 727 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 31 724 IPR045051 -
Viun8g02255 727 Pfam Fibronectin type-III domain 627 724 IPR041469 -
Viun8g02255 727 CDD Peptidases_S8_3 105 555 IPR034197 -
Viun8g02255 727 Gene3D - 322 458 - -
Viun8g02255 727 Gene3D Peptidase S8/S53 domain 128 593 IPR036852 GO:0004252|GO:0006508
Viun8g02255 727 Pfam Subtilase family 127 572 IPR000209 GO:0006508|GO:0008236
Viun8g02255 727 Pfam Peptidase inhibitor I9 31 102 IPR010259 -
Viun8g02255 727 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 20 105 IPR037045 -
Viun8g02255 727 PRINTS Subtilisin serine protease family (S8) signature 189 202 IPR015500 -
Viun8g02255 727 PRINTS Subtilisin serine protease family (S8) signature 518 534 IPR015500 -
Viun8g02255 727 PRINTS Subtilisin serine protease family (S8) signature 126 145 IPR015500 -
Viun8g02255 727 ProSitePatterns Serine proteases, subtilase family, serine active site. 519 529 IPR023828 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g02255 Viun-Chr8 32604770 32610614 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g02255 27 725 Subtilisin-like Serine Gene Family AT5G59100 48.324 0.0 637
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g02255 - - vum:124828449 1186.4