Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g02254 ATGAAGACTTTAGGGTTGTCGCATCTCCTACAAATTCTTACTTGCATTCTGCTACTTACTCCCTCATTTTCTAAAGATGATCGAAAGATTTACATAGTGTACATGGGCGAATATCCGAAGGGCATGGAATTCACAGAATCACTTCACACTAATATGGTTCAAAGTGTCATCAGCAGCACATTTGCACAAGATACTTTGGTGCACAGCTACAAGAGTTTCAATGGATTTGTGGCCAGGCTGACCAAAGAAGAATCAGAAAGAATGAAAGGAATGGATGGTGTGGTTTCTGTTATTCCAAACAGAGTCCACAGTACCCAAACATCAAGGTCCTGGAACTTCCTTGGCTTCCCTGAAAATGTGCAAAGATCAAAGGAAGAAAATAACATAATCGTTGGAGTAATCGACAGTGGAATTTCGCTTAATTCCTCAAGCTTTACCGGACGCTTTGGTCCACCACCGCAGAAATGGAAGGGAACATGCCACAACTTCACTTGCAATAACAAAATAATTGGAGCAAAATATTTTCGCCTTAGTGGTGTGTTCGCCGATGAGGACATGGTATCTCCAGCTGATACGAGTGGTCACGGGTCTCACTGTGCATCCATTGCTGCTGGAAACCATGTTAGCAATGCAAATTTGTTTGGGCTTGCCTCAGGAACAGCAAGAGGAGGAGTTCCATCGGCACGCATTGCTGTGTATAAAGTTTGTTGGACAACTGGTTGTGAAACTGTTGACATTCTTGCAGGATTTGATGCAGCCATTATCGATGGTGTCGACATTATATCTGTTTCATTGGGACCTAAAAACTTCATGCGCATTGAATATTTTGAAGATCCAACTGCAATTGGAGCTTTCCATGCAATGAAAAAAGGCATATTAACTTCTAAATCTGCTGGGAATTCGGGTCCAAGCCATTACACAATCTCAAATTCTGCACCCTGGTTCATTTCTGTGGCTGCTTCCACTATGGACAGAAAGTTTTTCACCAATCTCCAACTCGGCAATGGCCGAATCTTCCAGGGAATTTCAGTGAATACATTTAGTCCAACAAAGAAAAGTTACCCTTTAATTTATGGTGGAGATGCACCAGCTGCTGGATTTAATAGTTCATTGTCCAGGTCTTGCCTTGACGATTCTTTGAATGGAGCTTTGGTGAGAGGGAAAATTGTTTTGTGTGATTATGACGACATATATACTTATCCGGCCAAAGTGGGATTTGCTTCCGGGGCTGCTGGTCTTATATTCAGAACTACATCGCCTTTAGCTGTGCCAGATCTTTATGCATTGCCAGCAATTCAGATAAGCGCAAGTGATGGGAATTCCGTATTTTCTTATTTAAACTCAACACGTAATCCAGTAGCTACCATACTCAAGAGTTACGAACGGAACGATTCATCAGCCCCTTCAATTGCCCCTTTCTCATCAAGAGGTCCAAATATGATCACTCCAGACATTCTTAAGCCTGATATAGCAGCCCCAGGAGTTGAAATTCTTGCTGCATGGTCTCCGATTTCTCCTATTTCTGGTGTTGAAGGAGATAAAAGAGTATCGAATTTTAATATAGTATCTGGAACTTCAATGGCGTGCCCTCATGTTACTGCAGCAGCTGTTTACGTCAAATCATTTCATCCCAACTGGTCTCCTGCTGCAATAAAATCCGCGTTGATGACAACTGCTACCCCTATGAATCCTGCACGCAATGTGGAGGCTGAATTTGCTTACGGTGCGGGGCAAATCAATCCTTTGAAGGCAGTAAATCCTGGGCTAGTTTATGATATCGGTGAAAATGATTATATTCGTTTTCTGTGTGGACAAGGTTTAAGTTCACCCGCGCTGCAAATAATTACAGGAGATAACAGCACTTGCACATCAGCAAATGAAGGATCTGTTTTCGACCTCAATCTCCCATCTTTTGCTCTATCAACCCCTCGCTCAAGCCACAAAAATGTCACTTTTAGTAGAACTGTTACCAATGTTGGATCAGGTACATCCAAATATAAGGCCACAATAAGTGCACATCCATCTTCTTTGAACGTCCGAGTAGTGCCAAATGTTTTGGCCTTCTCATCGTTGGGTCAGAGGCTGTCTTTTACCCTTAATATTGAAGGAAGCATTAATGCAGACTTGGTTTCTTTTTCTTTGATTTGGGACGATGGCACTTTTAAGGCAAGGAGCCCTGTTGTTGTTTATGTTTAA 2196 0.4221 MKTLGLSHLLQILTCILLLTPSFSKDDRKIYIVYMGEYPKGMEFTESLHTNMVQSVISSTFAQDTLVHSYKSFNGFVARLTKEESERMKGMDGVVSVIPNRVHSTQTSRSWNFLGFPENVQRSKEENNIIVGVIDSGISLNSSSFTGRFGPPPQKWKGTCHNFTCNNKIIGAKYFRLSGVFADEDMVSPADTSGHGSHCASIAAGNHVSNANLFGLASGTARGGVPSARIAVYKVCWTTGCETVDILAGFDAAIIDGVDIISVSLGPKNFMRIEYFEDPTAIGAFHAMKKGILTSKSAGNSGPSHYTISNSAPWFISVAASTMDRKFFTNLQLGNGRIFQGISVNTFSPTKKSYPLIYGGDAPAAGFNSSLSRSCLDDSLNGALVRGKIVLCDYDDIYTYPAKVGFASGAAGLIFRTTSPLAVPDLYALPAIQISASDGNSVFSYLNSTRNPVATILKSYERNDSSAPSIAPFSSRGPNMITPDILKPDIAAPGVEILAAWSPISPISGVEGDKRVSNFNIVSGTSMACPHVTAAAVYVKSFHPNWSPAAIKSALMTTATPMNPARNVEAEFAYGAGQINPLKAVNPGLVYDIGENDYIRFLCGQGLSSPALQIITGDNSTCTSANEGSVFDLNLPSFALSTPRSSHKNVTFSRTVTNVGSGTSKYKATISAHPSSLNVRVVPNVLAFSSLGQRLSFTLNIEGSINADLVSFSLIWDDGTFKARSPVVVYV 731
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g02254 731 CDD PA_subtilisin_like 330 456 - -
Viun8g02254 731 PRINTS Subtilisin serine protease family (S8) signature 523 539 IPR015500 -
Viun8g02254 731 PRINTS Subtilisin serine protease family (S8) signature 191 204 IPR015500 -
Viun8g02254 731 PRINTS Subtilisin serine protease family (S8) signature 126 145 IPR015500 -
Viun8g02254 731 Pfam PA domain 354 441 IPR003137 -
Viun8g02254 731 Gene3D - 602 731 - -
Viun8g02254 731 Pfam Fibronectin type-III domain 632 729 IPR041469 -
Viun8g02254 731 SUPERFAMILY Subtilisin-like 106 589 IPR036852 GO:0004252|GO:0006508
Viun8g02254 731 ProSitePatterns Serine proteases, subtilase family, serine active site. 524 534 IPR023828 -
Viun8g02254 731 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 20 105 IPR037045 -
Viun8g02254 731 ProSiteProfiles Serine proteases, subtilase domain profile. 110 585 - -
Viun8g02254 731 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 31 729 IPR045051 -
Viun8g02254 731 Gene3D Peptidase S8/S53 domain 128 598 IPR036852 GO:0004252|GO:0006508
Viun8g02254 731 CDD Peptidases_S8_3 106 560 IPR034197 -
Viun8g02254 731 ProSitePatterns Serine proteases, subtilase family, histidine active site. 195 205 IPR022398 -
Viun8g02254 731 Pfam Peptidase inhibitor I9 31 104 IPR010259 -
Viun8g02254 731 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 131 141 IPR023827 -
Viun8g02254 731 Gene3D - 324 463 - -
Viun8g02254 731 Pfam Subtilase family 127 577 IPR000209 GO:0006508|GO:0008236
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g02254 Viun-Chr8 32581200 32600965 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g02254 27 730 Subtilisin-like Serine Gene Family AT5G59100 47.705 0.0 629
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g02254 - - vum:124828449 1147.88