Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g02253 ATGAGCTCTTTAGGGTTGTCGCGTCTCCTCCAAATTCTTACATGCGTTCTGCTATTCACTCCATCATTTTCTAAAGATGATCGAAAGATTTACATAGTCTACATGGGCGAATATCCGAAGGGCGTGGAACGCACAGAATCACTTCATACTAATATGGTTCAAAGTGTCATCAGCAGCACATTTGCACAAGATACTTTGGTGCACAGCTACAAGAGTTTCAATGGATTTGTGGCCAGACTGACCAAAGAAGAATCAGAAAGAATGAAAGGAATGGATGGTGTGGTTTCTGTTATTCCAAACAGAGTCCACAGTACCCAAACATCAAGGTCCTGGAACTTCCTTGGCTTCCCTGAAAATGTACAAAGATCAAAGGAAGAAAGTAACGTAATCGTTGGAGTACTCGACAGTGGAATCTGGCCTAATTCCTCAAGCTTTACCGATGAAGGCTTTGGTCCACCACCACAAAAATGGAAGGGAACGTGCTATAACTTCACTTGTAATAACAAAATAATTGGAGCAAAATATTTTCGCGTTCGGCGTGTGTTCGCCAAAGAGGACATCATATCTCCAACTGATACGAACGGTCATGGGTCTCACTGTGCATCGACTGCTGCTGGAAACTCTGTGAGCAATGCAAATTTGTTTGGGCTTGGGGCAGGAACAGCAAGAGGAGGAGTTCCATCAGCACGCATCGCTGTGTATAAAGTTTGTTGGACAAATGGTTGTGAAACTGCTGACCTTCTTGCAGGATTTGATGCAGCCATTATGGATGGTGTCGACATTATATCTCTTTCAGTGGGATATAAAAGAGTCGTACACTTCCAATATTTTGAAGATGACTTTGCAATAGGAGCTTTCCATGCAATGAAAAGAGGCATATTAACTTCTAAAGCTGCAGGCAATTCCGGTCCAAGCCATTACACAACGACAACTCCTGCACCCTGGATCATTTCTGTGGCTGCTTCCACTATAGACAGAAAGTTTTTCACCAATCTCCAACTCGGCAATGGCCGAATTTTCCACGGAATTTCAGTGAATACATTTACGCCGACACAGAATAGTTACCCTTTAATTTATGGGGGAGATGCACCAGCTGCTGGATATGATAGTTCCATATCCAGGTTTTGCATTGAAAGTACTTTGGATGGAGCTTTGGTGAGAGGGAAAATTGTTTTGTGTGATGGCGTTTCTTCTTCTGGATATGTGGGATTTGCTTCTGGGGCTGCTGGTCTTATATTCAGTAGTTCAGGGCCTTTAGTAGCAGCAGAGGTATATGCATTGCCAGCAATTCGCCTTAGCACAAGTGATGGGAATTCCGTATCTTCTTATTTAAAGTCAACAAGTAATCCAACAGCAACCATATTCAAGAGTTACGAAGGAAAAGATTTATCAGCCCCTTACGTTGCTCCTTTCTCCTCAAGAGGTCCAAATAAGGTCACCCCAAACATTCTTAAGCCTGATATAGCGGCTCCAGGAGTTGAAATTCTGGCAGCATGGTCTCCTATTGGTCCTATTTCTGGTGTTAAAGGAGATAAAAGAGTATCGTATTTTAATATAATATCTGGAACTTCAATGGCATGTCCTCATGTCACTGCAGTAGCTGCTTACGTCAAATCTTTTCATCCCAACTGGTCTCCTGCTGCACTTAAATCAGCCTTGATGACAACTGCTACCCCTATGAATCCTGCACTGAATGCAGATGCTGAATTTGCTTACGGTGCGGGGCAAATCAATCCTTTGAAGGCAGTAAATCCTGGACTAGTTTATGATGCTGGTGAATATGATTATATTAGTTTTCTGTGTGGACAAGGTTATAGTTCATCAGCGCTGCGAATAATTACAGGAGATAGCAGCACTTGCACATCAGCAAATAAAGGATCGGTTTTGGACCTTAATCTGCCGTCTTTTACTCTATCAACCCCTCGCTCAAGCCACAACAATGCCACTTTTGCTAGAACTGTTACAAATGTTGGATCAGCTACATCCAAATATAAGGCCACAATAAGTGCACATCCATCTTCTTTAAACGTCCAAGTAGTGCCAAATGTTTTGGCCTTCTCATCGTTGGATCAAAGGCTGTCTTTTAGCCTTAAGATTGAAGGAAGCATTAATGCAGACTTGGTTTCTTTTTCTTTGATTTGGGACGATGGCACTTTTAAGGCAAGGAGCCCCGTTGTTGTTTATGTTCCATAA 2193 0.4245 MSSLGLSRLLQILTCVLLFTPSFSKDDRKIYIVYMGEYPKGVERTESLHTNMVQSVISSTFAQDTLVHSYKSFNGFVARLTKEESERMKGMDGVVSVIPNRVHSTQTSRSWNFLGFPENVQRSKEESNVIVGVLDSGIWPNSSSFTDEGFGPPPQKWKGTCYNFTCNNKIIGAKYFRVRRVFAKEDIISPTDTNGHGSHCASTAAGNSVSNANLFGLGAGTARGGVPSARIAVYKVCWTNGCETADLLAGFDAAIMDGVDIISLSVGYKRVVHFQYFEDDFAIGAFHAMKRGILTSKAAGNSGPSHYTTTTPAPWIISVAASTIDRKFFTNLQLGNGRIFHGISVNTFTPTQNSYPLIYGGDAPAAGYDSSISRFCIESTLDGALVRGKIVLCDGVSSSGYVGFASGAAGLIFSSSGPLVAAEVYALPAIRLSTSDGNSVSSYLKSTSNPTATIFKSYEGKDLSAPYVAPFSSRGPNKVTPNILKPDIAAPGVEILAAWSPIGPISGVKGDKRVSYFNIISGTSMACPHVTAVAAYVKSFHPNWSPAALKSALMTTATPMNPALNADAEFAYGAGQINPLKAVNPGLVYDAGEYDYISFLCGQGYSSSALRIITGDSSTCTSANKGSVLDLNLPSFTLSTPRSSHNNATFARTVTNVGSATSKYKATISAHPSSLNVQVVPNVLAFSSLDQRLSFSLKIEGSINADLVSFSLIWDDGTFKARSPVVVYVP 730
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g02253 730 ProSitePatterns Serine proteases, subtilase family, serine active site. 522 532 IPR023828 -
Viun8g02253 730 ProSiteProfiles Serine proteases, subtilase domain profile. 110 583 - -
Viun8g02253 730 Gene3D - 600 729 - -
Viun8g02253 730 Pfam Subtilase family 127 575 IPR000209 GO:0006508|GO:0008236
Viun8g02253 730 Gene3D Peptidase S8/S53 domain 128 596 IPR036852 GO:0004252|GO:0006508
Viun8g02253 730 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 31 727 IPR045051 -
Viun8g02253 730 CDD PA_subtilisin_like 331 454 - -
Viun8g02253 730 PRINTS Subtilisin serine protease family (S8) signature 521 537 IPR015500 -
Viun8g02253 730 PRINTS Subtilisin serine protease family (S8) signature 192 205 IPR015500 -
Viun8g02253 730 PRINTS Subtilisin serine protease family (S8) signature 126 145 IPR015500 -
Viun8g02253 730 FunFam Subtilisin-like protease SBT1.5 128 337 - -
Viun8g02253 730 SUPERFAMILY Subtilisin-like 106 587 IPR036852 GO:0004252|GO:0006508
Viun8g02253 730 Pfam Fibronectin type-III domain 630 727 IPR041469 -
Viun8g02253 730 ProSitePatterns Serine proteases, subtilase family, histidine active site. 196 206 IPR022398 -
Viun8g02253 730 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 20 105 IPR037045 -
Viun8g02253 730 CDD Peptidases_S8_3 106 558 IPR034197 -
Viun8g02253 730 Gene3D - 325 461 - -
Viun8g02253 730 Pfam Peptidase inhibitor I9 31 104 IPR010259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g02253 Viun-Chr8 32570141 32576665 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g02253 27 728 Subtilisin-like Serine Gene Family AT5G59100 48.257 0.0 644
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g02253 - - vum:124828449 1230.7