Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g02219 ATGGCTGGGATTTGTTGCGGCGTTGTTGGAGAGGCCGGAGAGACTCCTTCTCCGACCAAGCCTGCCTCGCGCCCTTTCACTCGCCGGAGTTTGGACCAACTGCCTTTGAAATACATCGCCGGAGTGGCAATCCCGGCGCCGGAGAATCCTCGGAAGCGCCAGAAGCTGGATCAGCGCGCTTCTCCGGCGCGGGAGTGTGAAAACGCGATTCAGAGTTCTGAATCGAAGGAAGTCGAGGATGTCTCGCTTACGGATTGTTCGAAGGTTTCTACTTTGGACTCGACAACGGGTGTGGTCGAGGAGGTGTATCCGAGGTATGGGGTAACCTCGGTTTGTGGCAGGAGGAGGGACATGGAAGACGCAGTTTCGGTGCATCCTTCGTTTTGCCTGGAAAGTCGTGAAGAAGACCAGAAAGGGTTTCATTTCTTCGCTGTTTTTGACGGCCACGGATGCTCACACGTGGCGACTATGTGCAAGGAGAGGTTACACGAGATAGTGAAGGAGGAGATTCAAAAAGCGAAAGAGAATTTGGAATGGGAATCGATGATGAAGAAGAGTTTCGCTCAAATGGACGAAGAGGTGCAAAGGTGGAGCAGAACCAACGAGACACGCGCATGCAGGTGCGAGCTTCAGACCCCGCGCTGCGACGCCGTTGGCTCCACCGCGGTGGTTGCCGTCGTCACTCCGGAAAAGATCATCGTGGCCAACTGCGGCGACTCACGAGCCGTGCTCTGCCGGAACAGCGCACCCGTTCCACTCTCCGACGACCACAAGCCGGATCGACCCGACGAGTTGCTTCGGATCCAAGATGCGGGCGGGCGCGTGATATATTGGGACGGGCCTAGAGTGCTTGGGGTCTTGGCCATGTCAAGAGCCATAGGAGACAACTATCTGAAGCCGTACGTGATCTCGGAACCGGAGGTAACGGTAACGGACCGGAGTGAGGGGGATGAGTGTTTGATACTAGGGAGTGACGGGCTTTGGGACACGGTGCAAAACGACACCGCGTGTAAGGTGGCGCGGATGTGTCTGAACGCGCAGAAAGCGGCGGCGTCTCCGGGGAGGGAGTCGGCGGTGGATTGCTCCGACAAGGCGTGCTCCGACGCCTCCATTCTGCTGACGAAGTTGGCGTTGGTGAGGCACAGTTCCGATAATGTGAGCGTGGTGGTGGTTGATTTGAGGAGAGATGAGGGTCAACAATAA 1203 0.5694 MAGICCGVVGEAGETPSPTKPASRPFTRRSLDQLPLKYIAGVAIPAPENPRKRQKLDQRASPARECENAIQSSESKEVEDVSLTDCSKVSTLDSTTGVVEEVYPRYGVTSVCGRRRDMEDAVSVHPSFCLESREEDQKGFHFFAVFDGHGCSHVATMCKERLHEIVKEEIQKAKENLEWESMMKKSFAQMDEEVQRWSRTNETRACRCELQTPRCDAVGSTAVVAVVTPEKIIVANCGDSRAVLCRNSAPVPLSDDHKPDRPDELLRIQDAGGRVIYWDGPRVLGVLAMSRAIGDNYLKPYVISEPEVTVTDRSEGDECLILGSDGLWDTVQNDTACKVARMCLNAQKAAASPGRESAVDCSDKACSDASILLTKLALVRHSSDNVSVVVVDLRRDEGQQ 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g02219 400 MobiDBLite consensus disorder prediction 9 29 - -
Viun8g02219 400 FunFam Protein phosphatase 2C 37 100 400 - -
Viun8g02219 400 SMART PP2C_4 95 391 IPR001932 -
Viun8g02219 400 Gene3D - 94 399 IPR036457 -
Viun8g02219 400 PANTHER PROTEIN PHOSPHATASE 71 393 IPR015655 GO:0004722|GO:0006470
Viun8g02219 400 MobiDBLite consensus disorder prediction 43 77 - -
Viun8g02219 400 ProSitePatterns PPM-type phosphatase domain signature. 142 150 IPR000222 GO:0043169
Viun8g02219 400 SUPERFAMILY PP2C-like 99 394 IPR036457 -
Viun8g02219 400 CDD PP2Cc 105 350 IPR001932 -
Viun8g02219 400 ProSiteProfiles PPM-type phosphatase domain profile. 105 393 IPR001932 -
Viun8g02219 400 Pfam Protein phosphatase 2C 105 357 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g02219 Viun-Chr8 32405652 32407593 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g02219 80 395 PP2C-type Phosphatase Gene Family AT1G07430 61.960 7.91e-147 422
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g02219 K14497 - gmx:100781388 629.402
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun8g02219 8 32405652 32407593 Viun8g02219 8 32405652 32407593 ECH