Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g02194 ATGGCATTTGGGTTCATGGAGGTGGAGCTGGTGAAAGCAAAGGGTCTTCATGATACTGATGTCTTTGCTCGTATGGATCCTTATGTCCTGTTACAATACAAAGGTCAAGAGCGCAAGAGCCGTGTAATTCATGAGGGAGGCAGAAATCCTGTATGGAATGAGAAATTTGTATTCAGAGTAGAATATCCCGGATCAGGTGACCAATACAAGCTCAACCTTGTAATCATGGACAAGGATGTATTTTCTGCAGATGACTTTGTTGGCCAGGCTGCAGTTCATGTAAAGGATTTATTGGCAGAAGGAACAGAGAAGGGATCGGCTGTGCTTCGTCCTCACAAGTATAGTGTGGTTCGTGCTGACCAATCTTATTGTGGTGAAATTGAAGTTGGTATAACTTTCACCTTAAAGGAACAAGAATATGCTGATGATGATGAAGATGTTGGAGGATGGAAGCAAAGTTTCTTTTGA 468 0.4231 MAFGFMEVELVKAKGLHDTDVFARMDPYVLLQYKGQERKSRVIHEGGRNPVWNEKFVFRVEYPGSGDQYKLNLVIMDKDVFSADDFVGQAAVHVKDLLAEGTEKGSAVLRPHKYSVVRADQSYCGEIEVGITFTLKEQEYADDDEDVGGWKQSFF 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g02194 155 Gene3D C2 domain 3 134 IPR035892 -
Viun8g02194 155 Pfam C2 domain 6 101 IPR000008 -
Viun8g02194 155 PANTHER C2 DOMAIN-CONTAINING 1 139 - -
Viun8g02194 155 ProSiteProfiles C2 domain profile. 1 107 IPR000008 -
Viun8g02194 155 SMART C2_3c 5 106 IPR000008 -
Viun8g02194 155 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 3 134 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g02194 Viun-Chr8 32110648 32113620 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g02194 3 101 C2H2 Transcription Factor Family AT4G21160 29.293 1.54e-10 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g02194 - - gmx:100500493 272.707