Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g02176 ATGACCACCAAAGCTGAAGGCAGTGAAGAAAATATGTTGTCAAGTATGGAAGAGGGTTTTTCCCCTAGCCCTTCCACAACCTTTGGATTGCACCACTGTTGCTCAAACCATGTTGCAACCTTGGCACAGAAGGTGATAACAGAAGTGATTGGCACATATTTTGTGGTATTTGCTGGTTGTGGATCTGTGGCAGTGAATAAGATCTATGGCTCAGTCACATTTCCAGGTATTTGTGTGACATGGGGACTCATCGTAATGGTCATGATTTACACTCTTGCTCATATCTCTGGAGCACACTTCAATCCTGCAGTCACCGTCACTTTGGCCATTTTTCGCCGCTTCTCATATAAACATATGCCACTGTACATCTTTGCTCAGTTACTGGGGTCGATACTTGCAAGTGGCACACTAGCCCTAATGTTGGATGTGACACCTAAATCTTTCTTCGGAACGATACCAGTTGGATCCAATGTCCAATCTTTAGCTGCTGAAATCATCATCACCTTTCTCTTGATGTTTGTTATATCTGCTGTTACTACAGACGACAGAGCGGTGGGTGATTTTGCAGGAGTTGTAGTTGGGATGACTATAATGTTGAATGTCTTCATTGCCGGGCCTGTATCAGGAGCTTCCATGAACCCTGCAAGAAGTATTGGTCCTGCGGTTATGATACATCTTTACAAAGGGTTGTGGATATATATAGTTGGTCCAATTGTTGGAGCCATAGCTGGAGCACTTGCCTATAACTTTCTCAGATCCACACACAACTCACCTTCAGAACAAACCTCAGGGCCTTCTTCAGGTTGA 807 0.4411 MTTKAEGSEENMLSSMEEGFSPSPSTTFGLHHCCSNHVATLAQKVITEVIGTYFVVFAGCGSVAVNKIYGSVTFPGICVTWGLIVMVMIYTLAHISGAHFNPAVTVTLAIFRRFSYKHMPLYIFAQLLGSILASGTLALMLDVTPKSFFGTIPVGSNVQSLAAEIIITFLLMFVISAVTTDDRAVGDFAGVVVGMTIMLNVFIAGPVSGASMNPARSIGPAVMIHLYKGLWIYIVGPIVGAIAGALAYNFLRSTHNSPSEQTSGPSSG 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g02176 268 SUPERFAMILY Aquaporin-like 38 257 IPR023271 -
Viun8g02176 268 CDD MIP 43 251 IPR000425 GO:0015267|GO:0016020|GO:0055085
Viun8g02176 268 Gene3D Glycerol uptake facilitator protein. 13 263 IPR023271 -
Viun8g02176 268 PANTHER AQUAPORIN NIP2-1 19 261 IPR034294 -
Viun8g02176 268 MobiDBLite consensus disorder prediction 1 23 - -
Viun8g02176 268 NCBIfam MIP family channel protein 48 248 IPR000425 GO:0015267|GO:0016020|GO:0055085
Viun8g02176 268 ProSitePatterns MIP family signature. 99 107 IPR022357 -
Viun8g02176 268 Pfam Major intrinsic protein 40 248 IPR000425 GO:0015267|GO:0016020|GO:0055085
Viun8g02176 268 PRINTS Major intrinsic protein family signature 194 216 IPR000425 GO:0015267|GO:0016020|GO:0055085
Viun8g02176 268 PRINTS Major intrinsic protein family signature 43 62 IPR000425 GO:0015267|GO:0016020|GO:0055085
Viun8g02176 268 PRINTS Major intrinsic protein family signature 163 181 IPR000425 GO:0015267|GO:0016020|GO:0055085
Viun8g02176 268 PRINTS Major intrinsic protein family signature 231 251 IPR000425 GO:0015267|GO:0016020|GO:0055085
Viun8g02176 268 PRINTS Major intrinsic protein family signature 81 105 IPR000425 GO:0015267|GO:0016020|GO:0055085
Viun8g02176 268 PRINTS Major intrinsic protein family signature 118 137 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g02176 Viun-Chr8 31997496 31998909 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g02176 1 266 Major Intrinsic Protein MIP AT5G37820 59.925 2.53e-112 324
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g02176 K09874 - gmx:100791338 429.098