Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g02110 ATGATGAGTGCTTCTTCCTCCAGACAAGTTGACAAGGATGAACAAGAAGTGGAGGAACGAAAAATCCACAAACCAAGGTGGCTTGAGGCTTTTCTGAGAAAAATTTTCTTTAATTCGTGCTCAACTCATCCATTCCGTAAGAATGAGTTGAACAAGTATTGTATAAACTGCAATTTGTCAGTTTGTCAATACTGTATAGCTTCAGGTCCTCATCGCCATCACAAAATACTGAAAATCTATAGGCATGTTTACAAGGATGTTGTCTCTCTTGCAACTATGGAAAAGTATATTGACACCTCACAAATTCAGCCTTACAAATGCAACAAGCGACTGGTTATTTCACTGAATCCTCTACCACATTCTGGTTCAACAGCAAACAATGAGACATCATGCAATACTTGCAAAAGAAAATTGACTGAACCTGATTTATATCGCTATTGCTCCATTTCTTGCAAGGTTAGAGCTGTTTTAAATAACCCTGATGATTCAACTCCTCCCTTCATTTCCATCCAGACTCCTCGTCCTCCCCCTCAGCAGGAAAAGAAAGAGGAAACTGTTTCTGAACCTCAAAAGCCACAAAAGAGGAAAAGAAAGGGATCACCCCATAGAGCTCCCTTCTTCTGA 624 0.399 MMSASSSRQVDKDEQEVEERKIHKPRWLEAFLRKIFFNSCSTHPFRKNELNKYCINCNLSVCQYCIASGPHRHHKILKIYRHVYKDVVSLATMEKYIDTSQIQPYKCNKRLVISLNPLPHSGSTANNETSCNTCKRKLTEPDLYRYCSISCKVRAVLNNPDDSTPPFISIQTPRPPPQQEKKEETVSEPQKPQKRKRKGSPHRAPFF 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g02110 207 MobiDBLite consensus disorder prediction 177 194 - -
Viun8g02110 207 Gene3D Classic Zinc Finger 36 109 - -
Viun8g02110 207 SUPERFAMILY B-box zinc-binding domain 37 81 - -
Viun8g02110 207 CDD Bbox2 40 79 - -
Viun8g02110 207 ProSiteProfiles Zinc finger B-box type profile. 40 79 IPR000315 GO:0008270
Viun8g02110 207 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 20 206 - -
Viun8g02110 207 Pfam PLATZ transcription factor 81 153 IPR006734 -
Viun8g02110 207 MobiDBLite consensus disorder prediction 162 207 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Viun8g02110 PLATZ 4e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g02110 - - tcc:18601328 269.24