Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g02103 ATGACCTTGGAGGGGATTTTCATTGAGCCTACCTCAACCACTGCTCCTGATCTTTCTCTTCACATAAGCCCCCCAAGCATCTCTTCTTCATTGATTTCCAATACCAACCACATCACCAATTATGAACCCCAACCTAGTTTCCCTTCAAGAACTGTGTCTCAAGCCCACACAGAACTCTCTCTTGGAAGAAATTTCACTTCAGCAAGAGAAACACCAGCACCAGCACCAGCACCAGCACCAACACCAACTCCAACAACACACAACCCTTATTATCCAACCCAAACCCATTTCCATCATCTTCTCCACACCAGCAACAACACTACTACTAGTAGTACTACTGCGACGAGTGTTCCTGCAAGTGCCAACACTCCCTTGAATCACATAAACTATGGAGTTTCATTGCTTGATGTATCATCATCAGACGGCTTGAGGCCAATCAAGGGGATTCCGGTGTATCACAACCGTTCGTTCCCTTTTGTGTCCATGGACCATGCTAGAGACAACAAAGATCCTCATACCAAGATGTGCTTATATCATCACATGCCTTCTTACCCCTCTCTCTCTTCCTCGTGTTCCTCTCTGTGCTCCACAACCGCTCCTTCTTCTTCACCTTCGCCTTACTTCGTGGATCCCATGTCCTTCTTGAACAACGGTTCCACCGTGGGGTGTAGGGCAGCCACTGCCACCAGGTTTAATGGGTTTTCCGGCGATGCTTTCAAATCTCATCCATTGCACCAATATGGGGTAGGCTCTTCAGAAGCCTCTTCAGGGTTCATGAGATCAAGGTTTTTGTCTAAGCTTCCCAACAAGAGGAGCATGAGAGCACCCAGAATGAGGTGGACAAGCACCCTCCACGCTCGATTCGTCCATGCGGTTGAACTTCTCGGAGGCCATGAAAGAGCTACTCCAAAATCAGTTCTTGAGCTCATGGATGTGAAGGATCTAACACTAGCTCATGTGAAAAGCCATTTGCAGATGTATCGAACTGTTAAGACCACTGACAAACCTGCAGCGTCTTCAGGCCATTCAGATGGGTCTGGAGAGGATGACTTATCTCCTATTGGCAGCACCGCCGATCGGGGCAGTCTCCGGCAATTTCCCAGCCACAGAGGGCGGCCGGATTGGGTGGCGCAACAAGACATGGACTACTCTTCCACCACCACTCTTTGGAGTAATTCTTCAAGTTGTGGAGAATCGCGACAAAGAACTACGTCTAACGACATAGATGGTCTCAGATCACCTATTCTACAGTCACAAACAATATCAGGAGCTCATCAAATTCAGGAGTGTGATTCGACACAACAGAAGAACAACATGGGAGGTTCTAATTTGGAGTGCAAGAATCCGAGCTTGGAATTCACATTAGGAAGACCACATTGGGATGGCAAAGAGCAAGCGTAG 1401 0.4789 MTLEGIFIEPTSTTAPDLSLHISPPSISSSLISNTNHITNYEPQPSFPSRTVSQAHTELSLGRNFTSARETPAPAPAPAPTPTPTTHNPYYPTQTHFHHLLHTSNNTTTSSTTATSVPASANTPLNHINYGVSLLDVSSSDGLRPIKGIPVYHNRSFPFVSMDHARDNKDPHTKMCLYHHMPSYPSLSSSCSSLCSTTAPSSSPSPYFVDPMSFLNNGSTVGCRAATATRFNGFSGDAFKSHPLHQYGVGSSEASSGFMRSRFLSKLPNKRSMRAPRMRWTSTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRTVKTTDKPAASSGHSDGSGEDDLSPIGSTADRGSLRQFPSHRGRPDWVAQQDMDYSSTTTLWSNSSSCGESRQRTTSNDIDGLRSPILQSQTISGAHQIQECDSTQQKNNMGGSNLECKNPSLEFTLGRPHWDGKEQA 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g02103 466 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 16 464 IPR044847 GO:0000976|GO:0006355|GO:0010158
Viun8g02103 466 Gene3D - 275 332 - -
Viun8g02103 466 SUPERFAMILY Homeodomain-like 273 329 IPR009057 -
Viun8g02103 466 MobiDBLite consensus disorder prediction 379 410 - -
Viun8g02103 466 MobiDBLite consensus disorder prediction 73 87 - -
Viun8g02103 466 FunFam Myb family transcription factor 274 332 - -
Viun8g02103 466 MobiDBLite consensus disorder prediction 434 449 - -
Viun8g02103 466 MobiDBLite consensus disorder prediction 434 466 - -
Viun8g02103 466 NCBIfam myb-like DNA-binding domain, SHAQKYF class 276 329 IPR006447 GO:0003677
Viun8g02103 466 MobiDBLite consensus disorder prediction 333 410 - -
Viun8g02103 466 MobiDBLite consensus disorder prediction 66 91 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g02103 Viun-Chr8 31432011 31437466 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g02103 1 463 G2-like Transcription Factor Family AT5G16560 39.173 1.53e-70 228
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Viun8g02103 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g02103 - - gmx:100796325 611.683