Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g02094 ATGTCGCATCTTTCAACGCTCTTTATTTTTGCCTTCTTCAATTTCGTAGCAGCAGCCACCGAGTTCGACTTTGGAACCTTAACATTGGGAAGCCTCAAGCTTCTGGGGGACGCTCACTTTAACAACGGCACCGTAAGCCTCACGCGCGACCTCGCCGTTCCCACCTCCAGCGCCGGCAGAGCTCTTTACTCCCGTCCGGTCAGGTTCCGCCTACCGGGTAACCGCTCTCCGGCCAGCTTCACCACCTTCTTTTCCTTCTCCATCGCCAACCTCAACCCATCCTCCATCGGCGGCGGCCTCGCCTTCGTCCTTGCGCCGGACGACGAAACGATCGGCGATGCCGGTGGATTTCTTGGACTTAGCGCAGCCGCCGCCGCCGCCATCCGCGGCGGCGGCGGGTTTATTGCCGTCGAGTTTGATACGCTTATGGACGTAGAGTTTAAGGACATTAATGGGAACCACGTTGGGGTGGACTTAAACAGCGTTGTCTCGAGCGAGGTTGGTGATTTGGAGAGCGTTGGGATCGATCTGAAGAGCGGTGACCTAATCAACGCGTGGATTGAGTTCGATGGATCGAGCAGAGGGTTGAGCGTGTGGGTTTCGTATTCCAATTTGAAACCGAAAGATCCCGTTTTGTCGACGAGCCTCGACGTGGATAAGTATTTGAGTGATTTTATGTATGTGGGGTTCTCAGGTTCCACGCAGGGTAGCACAGAGATTCACAGAATAGAGTGGTGGAGTTTTGGTTCATCCTTTGATGCTGCGGCAGGGGCGGCCCCACCGCCTCCACCGGCGGTGAGTCTGATGAACCCGACGGCGAATGTGGTGAAGTCGGCACCTCCTTCTCCGGCTCCTTCTAATAGTGAACAGAAAGAGAGCAAAAGCAGATCGTCTTGCCACAATGGGTTGTGTAAGCAGAATTTAGGAGCGGTTGCCGGTGTTGTCACTGCCGGGGCGTTTGTTTTGGCTATTTTTGCCGGTGCATTGATTTGGTTTTACTCTAAGAAGGTTAAGCGTGTTAACAAGTTCGATTCGCTTGGTTCGGAGATCATTAAAATGCCGAAGCAGTTTACCTACAAGGAGCTGAAGTCTGCTACAAAGTGTTTCAATGCGAATAGGATCATTGGTCATGGCGCGTTTGGGACTGTGTATAAGGGGGTTTTGCCTGAAAACGGGGACACTGTTGCGGTGAAGAGGTGCAGCCATAGCAGTCAGGGGAAGAATGAGTTTTTGTCGGAGTTGTCTATCATTGGGAGCCTGAGGCATCGGAATCTGGTTCGGCTTCAAGGGTGGTGCCACGAAAAGGGGGAGATTCTGCTGGTGTATGACTTGATGCCGAACGGGAGTTTGGACAAGGCTTTGTTCGAGGCAAGGACACCTCTTCCCTGGTCTCACCGGCGTAAGATTCTGTTGGGCGTGGCCTCTGCCTTGGCCTACTTGCATCAAGAGTGTGAGAATCAGGTGATTCACAGGGACATCAAGACTAGTAATATAATGTTGGATGAAGGGTTCAACGCAAGGTTGGGAGATTTTGGTTTGGCGAGGCAAACGGAGCATGATAAGTCGCCGGATGCCACGGTGGCTGCCGGAACAATGGGGTACCTGGCACCGGAGTATCTCCTCACAGGAAAGGCTACAGAGAAAACTGATGTGTTCAGCTATGGTGCAGTGGTTCTTGAGGTGGCCAGTGGGAGAAGACCGATAGAGAAAGATGGGAATGGAGGTGGTAAGGGTGGAATTAGCTGCAATTTGGTGGAATGGGTATGGAGTTTGCACCGGGAAGGAAGGTTGCAAATGGCGGCTGATGCAAGGCTTGAGGGAGAGTTTGATGAGGGTGAGATGAGAAGGGTGCTCTTGGTTGGGCTAGCTTGTTCTCACCCTGATCCATTGGCTAGACCAACTATGAGGGGTGTGGTTCAGATGCTGGTGGGGGAAGCTGAAGTGCCTATTGTTCCAAGAACCAAGCCTACCACAGGTTTCAGTACTTCTCACTCTTACTTACTCATGAGCTTGCAAGATAGTGTTTCTGACTGTGATGGTATAATCACCATCTCCACATCCACATCAGAGAACAGCTTCAATCTTGGAGATATAGTCTGA 2100 0.52 MSHLSTLFIFAFFNFVAAATEFDFGTLTLGSLKLLGDAHFNNGTVSLTRDLAVPTSSAGRALYSRPVRFRLPGNRSPASFTTFFSFSIANLNPSSIGGGLAFVLAPDDETIGDAGGFLGLSAAAAAAIRGGGGFIAVEFDTLMDVEFKDINGNHVGVDLNSVVSSEVGDLESVGIDLKSGDLINAWIEFDGSSRGLSVWVSYSNLKPKDPVLSTSLDVDKYLSDFMYVGFSGSTQGSTEIHRIEWWSFGSSFDAAAGAAPPPPPAVSLMNPTANVVKSAPPSPAPSNSEQKESKSRSSCHNGLCKQNLGAVAGVVTAGAFVLAIFAGALIWFYSKKVKRVNKFDSLGSEIIKMPKQFTYKELKSATKCFNANRIIGHGAFGTVYKGVLPENGDTVAVKRCSHSSQGKNEFLSELSIIGSLRHRNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARTPLPWSHRRKILLGVASALAYLHQECENQVIHRDIKTSNIMLDEGFNARLGDFGLARQTEHDKSPDATVAAGTMGYLAPEYLLTGKATEKTDVFSYGAVVLEVASGRRPIEKDGNGGGKGGISCNLVEWVWSLHREGRLQMAADARLEGEFDEGEMRRVLLVGLACSHPDPLARPTMRGVVQMLVGEAEVPIVPRTKPTTGFSTSHSYLLMSLQDSVSDCDGIITISTSTSENSFNLGDIV 699
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g02094 699 CDD STKc_IRAK 375 642 - -
Viun8g02094 699 Pfam Protein kinase domain 370 581 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun8g02094 699 ProSitePatterns Protein kinases ATP-binding region signature. 375 398 IPR017441 GO:0005524
Viun8g02094 699 MobiDBLite consensus disorder prediction 271 292 - -
Viun8g02094 699 ProSitePatterns Serine/Threonine protein kinases active-site signature. 488 500 IPR008271 GO:0004672|GO:0006468
Viun8g02094 699 CDD lectin_legume_LecRK_Arcelin_ConA 20 252 IPR001220 GO:0030246
Viun8g02094 699 Gene3D Phosphorylase Kinase; domain 1 332 444 - -
Viun8g02094 699 MobiDBLite consensus disorder prediction 263 298 - -
Viun8g02094 699 PANTHER - 43 652 - -
Viun8g02094 699 Gene3D - 17 259 - -
Viun8g02094 699 FunFam L-type lectin-domain containing receptor kinase VIII.1 333 444 - -
Viun8g02094 699 FunFam L-type lectin-domain containing receptor kinase VIII.1 445 660 - -
Viun8g02094 699 SMART serkin_6 369 642 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun8g02094 699 FunFam L-type lectin-domain containing receptor kinase VIII.1 18 260 - -
Viun8g02094 699 Gene3D Transferase(Phosphotransferase) domain 1 445 648 - -
Viun8g02094 699 SUPERFAMILY Protein kinase-like (PK-like) 351 668 IPR011009 -
Viun8g02094 699 ProSiteProfiles Protein kinase domain profile. 369 667 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun8g02094 699 SUPERFAMILY Concanavalin A-like lectins/glucanases 18 255 IPR013320 -
Viun8g02094 699 Pfam Legume lectin domain 21 255 IPR001220 GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g02094 Viun-Chr8 31363347 31366221 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g02094 1 681 Receptor kinase-like Gene Family AT3G53380 69.065 0.0 928
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Viun8g02094 Pkinase 2e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g02094 - - gmx:100793157 1182.55