Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g02083 ATGGCACCTGTTTTGCCTCCTGGTTTTAGGTTCCACCCTACCGACGAAGAACTCGTTGCTTATTACCTTAAAAGGAAGATCAATGGCCGAACGATTGAGTTGGAAATCATTCCAGAAGTTGATCTCTACAAGTGTGAACCATGGGACTTACCAGGGAAATCATTGTTACCGGGGAAGGATTTGGAATGGTATTTCTTTAGCCCTCGTGACAGAAAATACCCAAATGGATCAAGAACAAACCGTGCAACAAAATCTGGGTATTGGAAGGCAACAGGGAAGGATAGAAAGGTAAATTCGAAGGCTCGTTCTGTGGGTATGAAGAAAACCCTAGTTTACTATCGAGGAAGAGCACCCCATGGCTCTCGCACAAATTGGGTTATGCATGAGTATCGTCTTGATGAAACAGAATGCGAAACTGCTTCAGGCTTGCAGGATGCATATGCTCTTTGCCGTGTGTTGAAGAAGACTGCAGTGATTCCTCAAAAAGTTGAGGGGCACTATGTTAATGTTCCCAATGTGAATCAGATTACGAGCGATCAATCATCAAGCATTGAACTATACTCAGAAGGAAGGGGCGAAGATTTAGTAGATAGCTCTAATTATTTTATGTCTGTGGATACTTGTTCACCCCACAATGTTGGAACTGAGACTCCTCTCACTATCGGTGGTGGAATGATAAGGGATCATGAAAAATGGTCACACTTTTCATCACAAGATCAAATATTTAGTCTTCCAACTTCTTCGTATCCTAATTTTGGAGCCATAGCATACCCTCCATCCAAGGTGGATATAGCCCTAGAGTGTGCAAGGATGCAACACAGGTTTGTTATGCCCGCTTTGGAGGTGGATGATTTCCCTCAAGTTGGAATCTCAGAGCTGAAAATGGCACAAGTATCTAGTTCCATGCAAGGAAGCAGAACTGAAACAGATATCTTACAGGAAATTCTTTCGGTGGCTCAGGCCTCTCAGGAACTAATAAATCAATCCAGCTACTCACAGGAATGGGGTGGCAATGATTATTATGCTCCTCGTGATGATGATTTTAGCTTCATGGTTGGCACTAATTACAATCATTCAAATGAAATAATGAACTCAGTGAGGTATGCTGACAAAGCATGGGAAGATGCAAACACAAGGACAATAGAGATCGGAGATATGGATGAAGAATTTAAGGCGGAGAGGAAGGTAGAGAACTTAAGATGGGTCGGAATGTCAAAAGAAGATTTAGAAAAGATGGAAGAACAAAATATTGTCCCAATAGAGGAAATTTCAAGCTTCCAAACTATGATGAAAGAAAATGAGGTGCAAGAATCTGAGCAACACAGTGACATGGAACATAATAATGACTTCTCATTGGGTTTCATCAACGATGACGAAGACCCTACCGACAACTTCACAGAAGATGGTAACAAGGATGATGATTATTCAAGTTCTCCTAGTTTTGAGGTTGTTGAGGAAATAAAGGTTAATCGTGGAATGTTTGTTTCGACTCGTCAAGTGGCGGAGACATTCTTTCAGCAAACGGTTCCTTCAAAAACAGTGCAAGTTCAGCTTAATACAGTGATGGCGCACAATCATTATGTGGAGAATGCAGAGGCAATGGTGTTGATAATGGAGGAACAAGGGTCTTTAAGGAAGGTTAAGGCCTATGTTATGGGAAAGCTGATAAAGCCATCGATGACAATAGCAAGTGCGTTTGTGTTCGTCTTTGCACTGGTGTTGATGCACTATGCTTTTCTAAAGGGAGAAGTGAAATTTTGGAATGAGACATGTTGCAGTAATGGTGGTACCATCATGAAGAAAACGAGTGAATCGTCTCAGATAATGAAATGGAATGAGTCAAATGATGTTTGGTTTATTGGTATCAAAAGTGAGAAAGGTTTAAGTGCAGTGTTGAAGAAAATAGGCATTTTTCTCACTGTATCCTTCGCTCTTTGTGCCATGTGGGTTAACCACACTTGA 1962 0.4128 MAPVLPPGFRFHPTDEELVAYYLKRKINGRTIELEIIPEVDLYKCEPWDLPGKSLLPGKDLEWYFFSPRDRKYPNGSRTNRATKSGYWKATGKDRKVNSKARSVGMKKTLVYYRGRAPHGSRTNWVMHEYRLDETECETASGLQDAYALCRVLKKTAVIPQKVEGHYVNVPNVNQITSDQSSSIELYSEGRGEDLVDSSNYFMSVDTCSPHNVGTETPLTIGGGMIRDHEKWSHFSSQDQIFSLPTSSYPNFGAIAYPPSKVDIALECARMQHRFVMPALEVDDFPQVGISELKMAQVSSSMQGSRTETDILQEILSVAQASQELINQSSYSQEWGGNDYYAPRDDDFSFMVGTNYNHSNEIMNSVRYADKAWEDANTRTIEIGDMDEEFKAERKVENLRWVGMSKEDLEKMEEQNIVPIEEISSFQTMMKENEVQESEQHSDMEHNNDFSLGFINDDEDPTDNFTEDGNKDDDYSSSPSFEVVEEIKVNRGMFVSTRQVAETFFQQTVPSKTVQVQLNTVMAHNHYVENAEAMVLIMEEQGSLRKVKAYVMGKLIKPSMTIASAFVFVFALVLMHYAFLKGEVKFWNETCCSNGGTIMKKTSESSQIMKWNESNDVWFIGIKSEKGLSAVLKKIGIFLTVSFALCAMWVNHT 653
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g02083 653 SUPERFAMILY NAC domain 3 155 IPR036093 GO:0003677|GO:0006355
Viun8g02083 653 Pfam No apical meristem (NAM) protein 6 132 IPR003441 GO:0003677|GO:0006355
Viun8g02083 653 Gene3D NAC domain 14 158 IPR036093 GO:0003677|GO:0006355
Viun8g02083 653 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 4 297 - -
Viun8g02083 653 MobiDBLite consensus disorder prediction 433 478 - -
Viun8g02083 653 FunFam Nac domain-containing protein 86 14 158 - -
Viun8g02083 653 ProSiteProfiles NAC domain profile. 5 155 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g02083 Viun-Chr8 31257369 31261040 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g02083 1 648 NAC Transcription Factor Family AT1G65910 42.963 7.16e-159 469
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Viun8g02083 NAM 6.2e-41 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g02083 - - gmx:100809019 1031.55