Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g02063 ATGTTACAATGCATGTGGGCAGATGTTGAAACAGATGAAGTGTATGCTCAAATGACGCTGCAGCCATTGACTCCGCAAGAGCAGAAGGATACGTTTCTTCCCATGGAGTTGGGCATTCCAAGTAAGCAGCCTTCAAATTATTTTTGCAAGACATTAACGGCAAGTGACACCAGCACGCATGGAGGGTTCTCTGTTCCTCGTCGTGCAGCTGAGAAAGTTTTCCCTCCACTGGATTTCTCACAGCAACCACCTGCTCAAGAACTAATTGCTAGGGATCTCCATGATGTTGAGTGGAAGTTCCGACATATTTTTCGAGGACAGCCAAAACGACACCTTCTTACAACTGGCTGGAGTGTATTTGTTAGTGCCAAAAGACTAGTGGCTGGGGATTCTGTGCTTTTTATATGGAACGAAAAGAATCAGCTTCTTTTGGGAATACGGAGAGCCAATCGACCGCAAACTGTCATGCCATCCTCAGTTCTATCCAGTGATAGTATGCACATTGGGCTTCTTGCAGCTGCTGCTCATGCTGCAGCAACTAATAGCTGCTTTACAGTGTTCTATAACCCAAGGGCTAGTCCATCTGAGTTTGTCATACCACTTTCAAAATATATCAAAGCTGTGTACCACACACGAGTGTCTGTTGGTATGCGTTTTAGGATGCTTTTCGAGACTGAAGAATCAAGTGTACGCAGGTACATGGGTACTATAACTGGCATAAGTGACTTGGATCCTGTTCGTTGGCCGAATTCTCATTGGCGGTCTGTTAAGGTTGGCTGGGATGAATCAACTGCAGGAGAGAGACAGCCACGAGTATCATTGTGGGAAATTGAGCCTTTAACAACATTTCCAATGTATCCATCACTGTTTCCTCTTAGATTGAAACGTCCATGGCATCCTGGCACCTCTTCTTTTCATGATGGCAGAGATGAAGCGACGAATGGGCTAATGTGGCTGAGGGGTGGACCTGGAGACCAAGGTCTCAATTCCCTGAGTTTTCAAGGGTCTGGTTTGTTGCCATGGATGCAGCAGAGAATGGACCCAACTTTGCTAGGAAGTGATCATAATCAGCAGTACCAAGCCATGTTTGCATCTGGTTTGCAGAACATAGGGAGTGGAGATTTGATGAGACAACAAATGATGAATTTTCAACAGCCTTTCAACTATGTTCAACAATCAGGAAACCCCAATCCTTCCTTGCAGCTTCAGCAACCACAAGCAATTCAGCAATCGGTATCTTCCAATAATATCCTACAGCCACAAGCCCAAGTATTGGCAGAGAACCTGTCTCAGCATCTCCTTCAAAAATCACACAATCGCGAAGATCAAACACAGCAGCAGCAGCAGCACACTTATCAAGATACGGTTTTACTTCAAAGTGATCAGCTTCATCAAAGGCAACACTCTGGTTTACCTTCACCATCATATTCAAAACCAGATTTCTTAGATTCAAGCATGAAGTTCCCTGCTACCGTTTCACCAGGACAAAATATGCTGAGTTCACTTTGTCCCGAAGGGAGTGGCAGTCTCTTGAATCTATCCAGAAGTGGTCAGTCAATGCTGACTGAACAACAGTTACCCCAACAATCATGGGCCCCAAAGTTTACACCTTTGCAGGTCAACACTTTTGGCAACTCAATGCCCCATGTGCAATATTCTGGAAAAGATACCACAATGGTGTCACCACACTGTAACTCTGACACCCAAAATCCTATTCTATTTGGTGTCAACATCGATTCATCTGGCCTTCTGCTCCCTACCACTGTCCCTCGTTATACCACCGCATCAGCTGATACCGATGCATCAGCAATACCATTAGGGGAGTCTGGATTCCAAGCTCCTCTATATCCTTGCGTCCAAGATTCATCAGAGTTGTTGCGAAGTGCAGGGCAAGTTGACCCTCAAAACCAGACACGAACATTTGTCAAGGTTTACAAATCAGGGTCGGTAGGGCGGTCTCTTGACATCTCCCGGTTCAGCAGTTATCATGAGCTGAGGGAGGAGTTGGCACAGATGTTTGGTATTGAGGGGAAATTAGAAGACCCTCTTAGATCAGGCTGGCAGCTTGTATTCGTCGACAGGGAGAACGATGTTCTTCTCCTTGGAGACGATCCGTGGGAATCATTTGTGAATAATGTTTGGTACATCAAAATACTTTCACCTGAAGATATCCAGAAAATGGGAGAACAAGCCGTGGAATCCCTTGGTCCAAGTTCAGGACAGAGGCTGAATAGCACTGGTGCTGATTCCCATGAAATTGTTTCTGGACTTCCATCAATAGGCTCCCTTGAATACTGA 2298 0.4543 MLQCMWADVETDEVYAQMTLQPLTPQEQKDTFLPMELGIPSKQPSNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLLAAAAHAAATNSCFTVFYNPRASPSEFVIPLSKYIKAVYHTRVSVGMRFRMLFETEESSVRRYMGTITGISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLKRPWHPGTSSFHDGRDEATNGLMWLRGGPGDQGLNSLSFQGSGLLPWMQQRMDPTLLGSDHNQQYQAMFASGLQNIGSGDLMRQQMMNFQQPFNYVQQSGNPNPSLQLQQPQAIQQSVSSNNILQPQAQVLAENLSQHLLQKSHNREDQTQQQQQHTYQDTVLLQSDQLHQRQHSGLPSPSYSKPDFLDSSMKFPATVSPGQNMLSSLCPEGSGSLLNLSRSGQSMLTEQQLPQQSWAPKFTPLQVNTFGNSMPHVQYSGKDTTMVSPHCNSDTQNPILFGVNIDSSGLLLPTTVPRYTTASADTDASAIPLGESGFQAPLYPCVQDSSELLRSAGQVDPQNQTRTFVKVYKSGSVGRSLDISRFSSYHELREELAQMFGIEGKLEDPLRSGWQLVFVDRENDVLLLGDDPWESFVNNVWYIKILSPEDIQKMGEQAVESLGPSSGQRLNSTGADSHEIVSGLPSIGSLEY 765
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g02063 765 SMART B3_2 48 150 IPR003340 GO:0003677
Viun8g02063 765 FunFam Auxin response factor 212 284 - -
Viun8g02063 765 Pfam Auxin response factor 174 257 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Viun8g02063 765 MobiDBLite consensus disorder prediction 463 482 - -
Viun8g02063 765 FunFam Auxin response factor 634 728 - -
Viun8g02063 765 SUPERFAMILY CAD & PB1 domains 637 713 - -
Viun8g02063 765 Pfam AUX/IAA family 636 723 IPR033389 -
Viun8g02063 765 SUPERFAMILY DNA-binding pseudobarrel domain 32 177 IPR015300 -
Viun8g02063 765 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 6 728 IPR044835 GO:0003677|GO:0006355|GO:0009725
Viun8g02063 765 ProSiteProfiles PB1 domain profile. 639 723 IPR000270 GO:0005515
Viun8g02063 765 ProSiteProfiles B3 DNA-binding domain profile. 48 150 IPR003340 GO:0003677
Viun8g02063 765 Gene3D - 635 728 - -
Viun8g02063 765 Gene3D - 212 284 - -
Viun8g02063 765 CDD B3_DNA 47 148 IPR003340 GO:0003677
Viun8g02063 765 FunFam Auxin response factor 46 150 - -
Viun8g02063 765 MobiDBLite consensus disorder prediction 389 408 - -
Viun8g02063 765 Gene3D - 46 149 IPR015300 -
Viun8g02063 765 MobiDBLite consensus disorder prediction 732 751 - -
Viun8g02063 765 MobiDBLite consensus disorder prediction 463 480 - -
Viun8g02063 765 Pfam B3 DNA binding domain 48 149 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g02063 Viun-Chr8 31137595 31147928 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g02063 18 736 B3 DNA Binding Superfamily AT5G37020 68.219 0.0 923
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Viun8g02063 AUX_IAA 8.8e-08 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g02063 - - vun:114193813 1497.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun8g02063 8 31137595 31147928 Viun8g02063 8 31137595 31147928 ECH
Viun6g01390 6 22541045 22547913 Viun8g02063 8 31137595 31147928 PCT