Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g02030 ATGTATCTTTCAAAGGGATGTTGTAAGTGTGAAGAAGTTCTTCTGCTGTTTTTGTGTTTATACTGCTACTTTCTATTGGCTACTGGTTTGATCACCGATCCAACTGAAGTTGACGCATTAAGAATCATAAAAGGAAGTTTGATAGATATTAATGGAAATTTGAGCAACTGGGATCGCAGAGATCCATGTACATCTAACTGGACAGGAGTTATGTGCTCCGATACAACATTAGTGGATGGCTATCTACATGTTAAACAACTGCATTTACTGAACATGAACTTGTCTGGAACTTTGGCACCAGAGATTGGACGCTTATCTTATCTGGAAGTCTTGGACTTTATGTGGAATCACATAACTGGGAGTATACCGAAGGAAATTGGCTTTATCAATCCTTTGAAACTGTTACTTCTGAATGGAAATCAACTAACTGGTGAGTTACCAGAAGAGCTTGGGTTTCTTCCATTCCTGATTCGATTGCAAATAGATCAGAACAATATCACAGGACCTATACCTTTATCATTTGCAAAACTGAACACCACTATACATTTTCACATGAACAACAATTCACTCAGTGGGCAAATACCAGCACAACTCTCCAGCTTAGGAAGCCTTCTTCACCTTCTTCTTGACAACAACAACTTTACAGGACATCTTCCCTCTGAGCTCTCTGAGATGCCAAGCTTAAAGATTCTTCAACTTGATAACAACAACTTTGGTGGAAATAGCATTCCACGTTCTTATGCAAACATGTCAAAATTGATAAAACTGAGTCTTCGGAACTGCAACTTGCAAGGACCAATCCCTGATTTGAGCACGATACCACGCCTTACGTATCTTGACCTCAGTTTGAATCAGTTGAATGAATCAATTCCAACTAATAAGCTTTCAGACAATATCACAACCATTGATTTATCAAACAATAATCTTATTGGAACTATTCCATCCTACTTTTCTAGTCTTCCACGTCTTCAAAAGCTGTCAATTGCAAACAATTCACTGAACGGAAGTGTTCCTTCTACCATTTGGCAGGACAGGGTTTTAAATGGATCAGAAATGCTTCGCTTGGACATGGAAAATAATCAACTTACAAGCATATCAGGCAGTACAAATCTTCCTCCAAATGTCACCCTCTGGCTTGAGGGAAATCCTATGTGCTCAAATAATAACACCTTAGCTCAGTTCTGTGGATCTGAAAGTGACATTAGCGTCAATGGTAACTTCAGTGTTAGCTGTCCCACCCAAGCATGCCCCCCTCCCTATGAATATACTGTGGACTGTTTCTGTGCTGCCCCGTTGGTTGTTAACTATCGATTAAAAAGTCCAGGATTTTCAGATTTCCGCACTTACACGAATGCATTTCAGAGCATGATGTCAAGGGGTCTTAAAATACGTATTGATCAGTTCTATATTCACAAATTTGAATGGGAAGAAGGTCCTCGTTTGGGAATGAACTTGAAGCTTTTTCCCATGTATGTTGATAATAACAGCTCTCATCTTTTCAATACAAGTGAGGTTCTTCGGCTCAGAAACTTGTTCTTAGACTTTGATCTTCCAACCAATGACTTGTTCGGACCTTTTGAGCTTCTAGACTTCATTCTCCTGGATCCTTACAGGGATGTGATTGTTACCTCTCCAAGTTCAGGGATCAGCAAAGGAGCACTGGTTGGAATAGTCTTGGGTGCAATTGCCTTTGCGGTTACTTTTTCTGCAATCGTTACAATGCTCGTATTGAGAATACGTTTGAGAGATCATCGTACACCTTCCAAACGGACAAAAGCATCTAGGATCTCAATAAAAATTGAAGGGATAAGATCATTTAATTACGAAGAAATGGCAGGCGCTACGAACAATTTTAGTGACTCTGCTCGAATTGGACAAGGTGGGTATGGGAAGGTTTTTAAAGGTCTTCTTCCTGATGGCACTGTTGTTGCCATAAAGCGTGCACAGGAGGGTTCCCTGCAAGGTGAGAAGGAGTTTCTTGCAGAAATAGAATTGCTGTCAAGGCTACATCACCGCAACCTTGTGTCTCTGATTGGATACTGTGATGAAAAGGGTGAACAGATTTTGGTTTATGAATACATGCCAAATGGAACGCTAAAGGATCACCTCTCCGTTTATTCAGAAAAACCTCTTACTTTTTCCATGAGGTTGAAGATTGCTCTTGGGTCAGCAAAAGGTCTTGTGTATCTACACACGGAAGTAGATCCTCCAATATTCCACCGAGATGTGAAGGCCACCAATATATTATTGGATTCCAAGTTCACTGCAAAAGTTGCTGACTTTGGACTTTCACGACTTGCCCCAGTCCAAGATACACAAGGAAACGTGCCTGGTCATGTATCTACTGTGATAAAGGGGACCCCGGGTTATATTGATCCAGAGTACGGCTTAACTCACAAATTGACTGACAAAAGTGATGTTTATAGTCTCGGTGTTGTGTTTCTAGAACTTGTGACTGGGAGGCCACCAATCTTTCATGGTGAAAATATTATTAGACAGGTTAATATGGCATACGAATATGGTGGATTGTTTTCAGTTATTGATAAACGGATCGGCTCTTATCCTTCAGAATACATGGAGAAGTTTTTGACGTTGGCCTTAAAGTGTTGCAAAGACGCACCAGACGAGCGACCTAAAATGGCAGAAGTGGCTAGAGAGCTAGAAAACATGTGTTCAATGTTACCTGAGACCAACGCTGTGGAAGCAGAACATGGGACAAGTGGTTATGGAAGAATAATATCCAGTTCACAACCTTCATCATCTACTAGCAGGACTCCTTTTGTTTCAGAAGATGTGTCTGGTAGTGACCTTGTCAGTGGAAAGATACCCACCATTAGGCCTAGATAA 2847 0.4074 MYLSKGCCKCEEVLLLFLCLYCYFLLATGLITDPTEVDALRIIKGSLIDINGNLSNWDRRDPCTSNWTGVMCSDTTLVDGYLHVKQLHLLNMNLSGTLAPEIGRLSYLEVLDFMWNHITGSIPKEIGFINPLKLLLLNGNQLTGELPEELGFLPFLIRLQIDQNNITGPIPLSFAKLNTTIHFHMNNNSLSGQIPAQLSSLGSLLHLLLDNNNFTGHLPSELSEMPSLKILQLDNNNFGGNSIPRSYANMSKLIKLSLRNCNLQGPIPDLSTIPRLTYLDLSLNQLNESIPTNKLSDNITTIDLSNNNLIGTIPSYFSSLPRLQKLSIANNSLNGSVPSTIWQDRVLNGSEMLRLDMENNQLTSISGSTNLPPNVTLWLEGNPMCSNNNTLAQFCGSESDISVNGNFSVSCPTQACPPPYEYTVDCFCAAPLVVNYRLKSPGFSDFRTYTNAFQSMMSRGLKIRIDQFYIHKFEWEEGPRLGMNLKLFPMYVDNNSSHLFNTSEVLRLRNLFLDFDLPTNDLFGPFELLDFILLDPYRDVIVTSPSSGISKGALVGIVLGAIAFAVTFSAIVTMLVLRIRLRDHRTPSKRTKASRISIKIEGIRSFNYEEMAGATNNFSDSARIGQGGYGKVFKGLLPDGTVVAIKRAQEGSLQGEKEFLAEIELLSRLHHRNLVSLIGYCDEKGEQILVYEYMPNGTLKDHLSVYSEKPLTFSMRLKIALGSAKGLVYLHTEVDPPIFHRDVKATNILLDSKFTAKVADFGLSRLAPVQDTQGNVPGHVSTVIKGTPGYIDPEYGLTHKLTDKSDVYSLGVVFLELVTGRPPIFHGENIIRQVNMAYEYGGLFSVIDKRIGSYPSEYMEKFLTLALKCCKDAPDERPKMAEVARELENMCSMLPETNAVEAEHGTSGYGRIISSSQPSSSTSRTPFVSEDVSGSDLVSGKIPTIRPR 948
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g02030 948 Pfam Leucine rich repeat N-terminal domain 34 73 IPR013210 -
Viun8g02030 948 ProSitePatterns Serine/Threonine protein kinases active-site signature. 738 750 IPR008271 GO:0004672|GO:0006468
Viun8g02030 948 MobiDBLite consensus disorder prediction 909 932 - -
Viun8g02030 948 Gene3D Transferase(Phosphotransferase) domain 1 694 906 - -
Viun8g02030 948 ProSiteProfiles Protein kinase domain profile. 618 890 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun8g02030 948 FunFam Predicted protein 174 395 - -
Viun8g02030 948 SUPERFAMILY Protein kinase-like (PK-like) 603 904 IPR011009 -
Viun8g02030 948 SUPERFAMILY L domain-like 45 410 - -
Viun8g02030 948 Gene3D Ribonuclease Inhibitor 32 297 IPR032675 -
Viun8g02030 948 Gene3D Phosphorylase Kinase; domain 1 588 693 - -
Viun8g02030 948 FunFam Leucine-rich repeat protein kinase family protein 582 693 - -
Viun8g02030 948 FunFam LRR receptor-like serine/threonine-protein kinase HSL2 694 903 - -
Viun8g02030 948 PANTHER RECEPTOR-LIKE PROTEIN 55 47 890 - -
Viun8g02030 948 SMART serkin_6 618 890 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun8g02030 948 ProSitePatterns Protein kinases ATP-binding region signature. 624 646 IPR017441 GO:0005524
Viun8g02030 948 MobiDBLite consensus disorder prediction 908 948 - -
Viun8g02030 948 Gene3D Ribonuclease Inhibitor 298 400 IPR032675 -
Viun8g02030 948 Pfam Protein kinase domain 619 884 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun8g02030 948 CDD STKc_IRAK 624 890 - -
Viun8g02030 948 FunFam Leucine-rich repeat receptor-like kinase 35 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g02030 Viun-Chr8 30903913 30915605 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g02030 12 896 Receptor kinase-like Gene Family AT5G01950 54.343 0.0 926
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Viun8g02030 Pkinase 4.5e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g02030 - - gmx:100785752 1539.63