Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g02029 ATGGAGGATTTTTTTCTTTCAATCGCATCAAAGATTGCAGAATATGCGGTGCATCCCATTATTCATCATGCTCAATACTTATGTTGTTTCAAAAACTTTGCTTCGAGTCTTCCAAATACCAAAGAACAATTGGAATTGACTCGAGACAAAGTGAAGGATCGAATTAGAGAAGCCATAAATAAAGTTGAAAAAGTTGAGCCAGCCGTTGAGAAGTGGCTGAAAGACGTTGAAAAAGTATTAGAAGAAGTGAAAATACTGGAAGAAAAAATATTGAGTGTGAATAAAAGCGTTTTCAGAAGGAAATGTCAATATTCTCTTGCAAAAGAAATAGAAAGAAAAACAATTGAAATGATTGAGCTTGATCATAATAGCAAGTTTGAGCCATTTTCAAGGATTACTGAACTTCCAGGCATGAAGTACTATTCTTCTAATAATTTCTTTATGTTCAATTCTACAGAAGCATCTTGCAACAAGCTTCTTGAAGAATTAAAGAACAAAAGTGTTTTGATGATCGGATTAGTTGGATTAGGTGGTTCAGGTAAAACTACTTTGGCAAAAGAAGTGGGTAAAAAAGCTGAAGAGATGAGAATCTTTGAGAAGGTTGTCTTTGCAACAGTGTCTCAACCTCTAAATATCAGAAGCATCCAAGATCAGATTGTTGATCAATTGGGATTCAAGTTAATGGAAGAATCAGATATAGGTAGAGCCCAGAGACTATCAGAGAGATTAAGAAAAGGTACAACTCTTGTAATCTTGGATGATGTATGGGAAAAAATAAACTTCCAAGCTTTAGGTATTCCACTTGATGAAAGTGGAAAGGGTTGTTGCGTATTCATAACAACTCGGAGTAAAGAAGTATGCACTTATATGCAATGTCAATGTACAATTGAACTTGATCTCTTGAGTGACGAGGAAGCTTGGACCTTGTTCACACATTATTCAAACATAAGTGACGACTCCTCAGAAGCTTTGAAAGGTGTTGCAAGAAAAATTGTTAATGAATGTAAGGGGTTGCCCATTGCAATTGTGACAGTGGGAAGCACCCTAAAGGAGAAAAGTATTGAAGATTTTGAGTTAGCATTGTCAAGGCTAGAAAATTCTAAGCCACTAGATATTCCACAAGGCTTAAGAAGTCCTTATGTTTGTCTTGAATTAAGTTACACTAATTTGACAAACCAATTATCTCAATCCTTATTATTATTGTGTTCTATGTTTCCAGAGGATTGTGAAATAGATTTGGAAGATTTATTTCGATTTGGAAGAGGATTTGGCACAATTGGGACATTTGGAACAATGGAGAACGCAAGGAGAGAGATGCATGTAGCTATAAAGTTGCTCATGAATTGTTGTTTGTTAATGCATGGAAAAGAAAAACAAAGGGTAAAACTGCATGATTTGGTTCGTGATGTAGCCTTGTGGATTGCGTCTAAAAGTGGTCAAGCAATTTTCACACGTACTGAAGTGGATCCAAAGGAGTTGGCAGATGATGACGTCATGAAAGATATGAAAGCAATAGCCATATGGGGTTTGAATAGTTATCATCTACTCAATTATAAATTAAATTATCCAATACTTGAAATTCTCTTGCTTTCTTTTGAAGTGAGTGGTGTAAAAGTATCAGATGGGTGTCTTCAAAGCTTGGCAAAGCTTAAAACCTTGGCAATCATAAACGAATGGAATGAAGGTGCCTTGCCTTTGCAAGAGTCATTGAATTCATTAAAAAATATTCGAACACTATGCTTGAGGGGTCATGATTTAGGTGACATATCTTTTGTGGAACGACTGCAAGCACTTGAGATTCTTGACTTGCGTGGCTCTTATTTTGATGATTTGCCTGTTGGGATCGTAGAATTAAAGAAGTTGAAGCTTTTGGATTTGTACAAATGTGTGATTAAGAAAAATAAAAATGTTGAAGCTTATGAAGTTGTAAAGAAATGTTTGCAGCTGGAGGAATTGTATTTATGCTTAATCGAATATGAAAAGGCCTTTCCACATGATGTCTCTTTCTCCAGATTACAGAGGTATGTTATAATGAGCGGTTATCTTTTTTCTCATAAACATTACTTATGTCGTGGTGATCTTATGGTTATGAAAAAATACGCACAATCTAGAAGTTTATTAATAGATGAGTTTAATGTTGGCGCTCAGAGTTTTATATCATCACCAATAAAGGATCTCTTTATAAGAGCAGAGTACCTTAATTTGAGAAACCTTAAGGGAGATTATAAAAATATAATCCCATCTATGGATCCACAAGGCATGAATCAGTTGGTTGCTCTATCACTCAAATATTGTTCAAAGATAGAATGTCTGATTGATAGCACTATCAATAGCAACACCAGTTTTGGTTTGCTTCAAACTGAAGTTGTGTTCTCCACCATTGTTTACTTGAGTTTGGTAGACTTAGATAATCTTCGAGAGGTGTTTTGTGATCCCTCTTCTCGATGTTCTCTGAAAAATTTACAAGAGCTCGAGATAGAAAGATGTTACAAATTGATCAGCGTATCATTTCCTATGAGCTCAAAGCTATGCAATCTGAAGGTCCTTACAATATCAGAATGCCCAATGCTATCTTCTCTCTTCACGCCATCCGTTGTCCAAACTCTAGAGCTGTTAGAGGTTCTAAGAATATATAGATGCAAATCATTGAGACACATAATAGAAGAAGAGAATGACGTTCTTTCAAGCACTCAAAGTCATTCTTCTTTGACGCTCCAGAAATTAAGGACTCTTCAAATTTCTTCATGTGACAATTTGGAGTATATATTCTCTGTGTTTTTAGTGGAAGGGCTAGTAAGTTTGGAAAGTGTGGAGATTTCATGCAATGAGAAGTTGAAGTATGTATTTGGCAATGAAAAGGAGCATAATCTTGCAGGGTACCCAAGTTTCCAACAGACTAATAGTGAAAGAAATTTGCCTAATTTGAAATCTATGGAGTTGAGGAGTTTACCAAATTTAATTGACTTTTGGCCTGAATATTGTCGTGCACATCTCCCAAGTCTTAATGGTTTATATTGCGAGGAATGTCCAAAATTATCTAATTCTTCCATACATAAGGTGATGACTGCTTCAGATATCCAGCAACAGACAACTCCAGTGGAGAATGATATCCTATGGTTGATTAGCAACACATTGAAGCAATTGGACGATGATCCATTGTCTCACCCACAACTCAAAGTTTTCCTCAAATTTAGAATCCTATGGTTGAGTGATCTTAAGATAAAAGGTATCTTCGAATTCCAAATGGGAGAAGAAGGGGGCACTGCACAACTGCTTCCCCTAAACTTGGATATGGCTTGGCTACAATTGTTGAATCTACCTGAGCTCAATTTCATATGGAAAGGCCCCACAGCTTTTCTAAGCTTCCAAAACCTTCGTGATATTGATGTGGTAAGCTGTCCAAAATTGAAAACCATCTTCTCCACCGCCGTTGTTACAAGTTTACCAATGTTGGAGCATTTGAGAATATATAATTGTGATGAATTGGAACAAATATTTGATTTAGGTGATGCGCAACAACTCAAAACCCTATCTTCTTCCCAACAACTCTGCTTCCCAAAACTCTCTTCCATTCGAGTTACAAACTGCAATATGTTGAAATATCTTTTTTATAATATCCCAGCCAGTCATTTTACCAGTGTGATACAACTGGAAATAAGTAATTGTTCTCAGTTACACAAGGCTTTTGGTTTTGAACACGAAGCTGATGATGATGGTTGGGAAGAGATGGGTAAGGATGGAAAACAACTACTATTACACAACTTGAAATTTATAACACTCACAGATCTGCCAAACTTCCAAGAGATTCACCACGGATTTAAGTTAAAAGAAGTTGTTCAACATATCATAAGGGAATGTCCCGTGTATTCTCCAAGTTTATATCTACATCCAGGTGACACTTGA 3903 0.3615 MEDFFLSIASKIAEYAVHPIIHHAQYLCCFKNFASSLPNTKEQLELTRDKVKDRIREAINKVEKVEPAVEKWLKDVEKVLEEVKILEEKILSVNKSVFRRKCQYSLAKEIERKTIEMIELDHNSKFEPFSRITELPGMKYYSSNNFFMFNSTEASCNKLLEELKNKSVLMIGLVGLGGSGKTTLAKEVGKKAEEMRIFEKVVFATVSQPLNIRSIQDQIVDQLGFKLMEESDIGRAQRLSERLRKGTTLVILDDVWEKINFQALGIPLDESGKGCCVFITTRSKEVCTYMQCQCTIELDLLSDEEAWTLFTHYSNISDDSSEALKGVARKIVNECKGLPIAIVTVGSTLKEKSIEDFELALSRLENSKPLDIPQGLRSPYVCLELSYTNLTNQLSQSLLLLCSMFPEDCEIDLEDLFRFGRGFGTIGTFGTMENARREMHVAIKLLMNCCLLMHGKEKQRVKLHDLVRDVALWIASKSGQAIFTRTEVDPKELADDDVMKDMKAIAIWGLNSYHLLNYKLNYPILEILLLSFEVSGVKVSDGCLQSLAKLKTLAIINEWNEGALPLQESLNSLKNIRTLCLRGHDLGDISFVERLQALEILDLRGSYFDDLPVGIVELKKLKLLDLYKCVIKKNKNVEAYEVVKKCLQLEELYLCLIEYEKAFPHDVSFSRLQRYVIMSGYLFSHKHYLCRGDLMVMKKYAQSRSLLIDEFNVGAQSFISSPIKDLFIRAEYLNLRNLKGDYKNIIPSMDPQGMNQLVALSLKYCSKIECLIDSTINSNTSFGLLQTEVVFSTIVYLSLVDLDNLREVFCDPSSRCSLKNLQELEIERCYKLISVSFPMSSKLCNLKVLTISECPMLSSLFTPSVVQTLELLEVLRIYRCKSLRHIIEEENDVLSSTQSHSSLTLQKLRTLQISSCDNLEYIFSVFLVEGLVSLESVEISCNEKLKYVFGNEKEHNLAGYPSFQQTNSERNLPNLKSMELRSLPNLIDFWPEYCRAHLPSLNGLYCEECPKLSNSSIHKVMTASDIQQQTTPVENDILWLISNTLKQLDDDPLSHPQLKVFLKFRILWLSDLKIKGIFEFQMGEEGGTAQLLPLNLDMAWLQLLNLPELNFIWKGPTAFLSFQNLRDIDVVSCPKLKTIFSTAVVTSLPMLEHLRIYNCDELEQIFDLGDAQQLKTLSSSQQLCFPKLSSIRVTNCNMLKYLFYNIPASHFTSVIQLEISNCSQLHKAFGFEHEADDDGWEEMGKDGKQLLLHNLKFITLTDLPNFQEIHHGFKLKEVVQHIIRECPVYSPSLYLHPGDT 1300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g02029 1300 Gene3D - 384 472 IPR036388 -
Viun8g02029 1300 Coils Coil 41 61 - -
Viun8g02029 1300 Gene3D - 139 297 IPR027417 -
Viun8g02029 1300 SUPERFAMILY L domain-like 463 1178 - -
Viun8g02029 1300 Gene3D - 300 383 IPR042197 -
Viun8g02029 1300 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 1098 1202 - -
Viun8g02029 1300 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 141 399 IPR027417 -
Viun8g02029 1300 Gene3D Ribonuclease Inhibitor 487 676 IPR032675 -
Viun8g02029 1300 Pfam NB-ARC domain 155 367 IPR002182 GO:0043531
Viun8g02029 1300 PRINTS Disease resistance protein signature 903 919 - -
Viun8g02029 1300 PRINTS Disease resistance protein signature 170 185 - -
Viun8g02029 1300 PRINTS Disease resistance protein signature 335 349 - -
Viun8g02029 1300 PRINTS Disease resistance protein signature 242 256 - -
Viun8g02029 1300 Gene3D Ribonuclease Inhibitor 704 1037 IPR032675 -
Viun8g02029 1300 FunFam Probable disease resistance protein At1g61300 142 294 - -
Viun8g02029 1300 Coils Coil 69 96 - -
Viun8g02029 1300 Gene3D Ribonuclease Inhibitor 1038 1233 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g02029 Viun-Chr8 30885619 30890776 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g02029 160 488 WRKY Transcription Factor Family AT5G45050 24.490 1.11e-11 67.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g02029 - - vra:106778921 1784.62