Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g02026 ATGGCAGGCGCTACGAACAATTTTAGTGACTCTGCTCGAATTGGACAAGTTGTTGCCATAAAGCGTGCACAAGAGGGTTCCCTGCAAGGTGAGAAGGAGTTTCTTACAGAAATAGAATTGCTGTCAAGGCTACATCACCGCAACCTTGTGTCTCTTATTGGATACTGTGATGAAAAGGGTGAACAGGTTCATGTTCGAAACCAAAAGCTTTGTGTAACTGAGAGCAATTTTCTATTTCCAATTCTTCCACACTGGCAACTACTGAATTTGAACCTTTCTGGAACTTTGGCACCAGAGATCGGCAACTTGTCTTATTTGGAAATAGTGGACTTTATGTGGAATGACATTACTGGGAGTATACCGAAGGAGATTGGCAATATCAAAACTTTGAAACTCTTACTCCTGAGTGAAAATAAACTAACAAATGATCTGCCTGATGAGCTTGGCCATCTTCCAGCGCTGGAGAGAATGCAAATTGATGAGAACATTATTACAGGATCCATACCACTATCATTTGCAAACCTGAACAGCAAAAAACACTTCCACATGAACAACAATTCACTTAGTGGACAAATCCCAGCACAGCTTTCCCAATTAGGAAGCCTTATTCACCTTCTTCTTGACATCAATAACTTGACAGGAAATCTCCCATCCGAGCTCTCTGAGATGCCAAGCTTAACGATACTGTATGATTGA 696 0.4124 MAGATNNFSDSARIGQVVAIKRAQEGSLQGEKEFLTEIELLSRLHHRNLVSLIGYCDEKGEQVHVRNQKLCVTESNFLFPILPHWQLLNLNLSGTLAPEIGNLSYLEIVDFMWNDITGSIPKEIGNIKTLKLLLLSENKLTNDLPDELGHLPALERMQIDENIITGSIPLSFANLNSKKHFHMNNNSLSGQIPAQLSQLGSLIHLLLDINNLTGNLPSELSEMPSLTILYD 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g02026 231 PANTHER RECEPTOR-LIKE PROTEIN 55 2 58 - -
Viun8g02026 231 Pfam Protein tyrosine and serine/threonine kinase 15 62 IPR001245 GO:0004672|GO:0006468
Viun8g02026 231 Gene3D Ribonuclease Inhibitor 86 229 IPR032675 -
Viun8g02026 231 Gene3D Phosphorylase Kinase; domain 1 3 66 - -
Viun8g02026 231 FunFam Leucine-rich repeat receptor protein kinase EMS1 144 230 - -
Viun8g02026 231 SUPERFAMILY Protein kinase-like (PK-like) 13 63 IPR011009 -
Viun8g02026 231 SUPERFAMILY L domain-like 82 230 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g02026 Viun-Chr8 30849307 30852023 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g02026 1 65 Receptor kinase-like Gene Family AT5G01950 61.250 3.48e-22 92.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Viun8g02026 PK_Tyr_Ser-Thr 1.1e-05 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g02026 - - vun:114195098 437.187