Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g02007 ATGTTAGAAGTGGAGAGAAAGAAGGAAGAGAGTTCAACTCTGTTGGGTGACAAAACTATTAGCTTTAGGGAACAGATGCAAGATCCATCTTCAAACCCTAATTCCAATTCCAATCCCAATCCTCACAATGCCAATGCCGCATCTCAGCCACCGCGACCGGCACCGTCAACAGCGGCCGCCGGCGCCGGCGCCTCATCGTCCTCGATTTTCGCACGCTCCGGCGGGCCTCACCACCGGCGAGCTCACTCGGAGGTGAGTTTCCGGCTTCCGGACGACATGATGGACCTTTCGCCGTCGGATCCGTTTGCCGGCGGGTCATCTACGGCGAGTATGGACGAGATCGGATCCGAGGACGACTTGTTCTCGACGTACATTGACGTGGACAAGCTGGGAGGTGCAAACGGGTCGGGCGGTGCAGGAAATGGAGCGGATCCGACCGGAGAACTGGAGAAAAGTCCGGCGATGGCGAGGCACCGGCACAGTAATTCCGTCGATGGCTCTTCATCGTTTGGCGAAATTATGGAAGCTAAGAAGGCTATGCCTCCTGATAAGTTAGCCGAGCTATGGACAGTTGATCCTAAGCGTGCTAAGAGAATACTTGCAAATCGGCAATCCGCTGCTCGATCTAAAGAGAGAAAAGCTCGCTATATACAAGAACTCGAGCGCAAGGTTCAAACACTTCAGACGGAAGCCACAACTCTTTCTGCTCAATTGACATTATACCAGAGGGACACGACAGGCCTGAGTACTGAAAATACCGAGCTTAAGCTCCGTCTGCAAGCCATGGAGCAGCAAGCACAGCTTCGAGATGCTCTTAATGAAGCATTGAAAAAGGAAGTTGAGAGACTTAAAGTTGCTACTGGTGAGATGATGAGCCACACTGAATCCTTTAATTTGGGAATGCACCATATGCCGTTTACGGGACCAACTTTCAGTCCAATCGTGTCACAATCAGGCCCTTCTGGTCACCAAAACATCCAGTTGTCATCATTTGGTCACTCCCCATCAACAATGCCAACTCATCCACTGCATCAAACTAGTTCTCATACACTATCAGAAATATTGCAAAATGACCAGCTTGGTCGTTTCCAGGGGCTTGACATTAGTAGCAAAGGGTCAACTCTGGTGAAGTCTGAAGGCCCCTCACTTTCTGCAAGGATGCTCACCAAAAAGGGGAAGCACCCTTGGGGTTTTGTTGTGAAGTTCACACAATCGTGTTTCAGCAAGGCATTTGGTGTTTCTGGGCGCTGGAATATCGGGAATGAAAGGTCGTTCCCATTGTATCTTTGTATGTTGGGATATGCATCGATCCTCTGA 1317 0.5027 MLEVERKKEESSTLLGDKTISFREQMQDPSSNPNSNSNPNPHNANAASQPPRPAPSTAAAGAGASSSSIFARSGGPHHRRAHSEVSFRLPDDMMDLSPSDPFAGGSSTASMDEIGSEDDLFSTYIDVDKLGGANGSGGAGNGADPTGELEKSPAMARHRHSNSVDGSSSFGEIMEAKKAMPPDKLAELWTVDPKRAKRILANRQSAARSKERKARYIQELERKVQTLQTEATTLSAQLTLYQRDTTGLSTENTELKLRLQAMEQQAQLRDALNEALKKEVERLKVATGEMMSHTESFNLGMHHMPFTGPTFSPIVSQSGPSGHQNIQLSSFGHSPSTMPTHPLHQTSSHTLSEILQNDQLGRFQGLDISSKGSTLVKSEGPSLSARMLTKKGKHPWGFVVKFTQSCFSKAFGVSGRWNIGNERSFPLYLCMLGYASIL 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g02007 438 Coils Coil 258 289 - -
Viun8g02007 438 MobiDBLite consensus disorder prediction 1 113 - -
Viun8g02007 438 MobiDBLite consensus disorder prediction 15 52 - -
Viun8g02007 438 SMART brlzneu 190 254 IPR004827 GO:0003700|GO:0006355
Viun8g02007 438 Pfam bZIP transcription factor 194 249 IPR004827 GO:0003700|GO:0006355
Viun8g02007 438 CDD bZIP_plant_RF2 195 244 IPR044759 GO:0003700|GO:0006355
Viun8g02007 438 Coils Coil 210 237 - -
Viun8g02007 438 Gene3D - 193 245 - -
Viun8g02007 438 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 192 255 IPR004827 GO:0003700|GO:0006355
Viun8g02007 438 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 28 356 - -
Viun8g02007 438 SUPERFAMILY Leucine zipper domain 194 245 IPR046347 GO:0003700|GO:0006355
Viun8g02007 438 FunFam probable transcription factor PosF21 193 246 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g02007 Viun-Chr8 30609174 30611848 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g02007 26 372 bZIP Transcription Factor Family AT2G40620 51.538 2.69e-103 310
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Viun8g02007 bZIP_1 7.1e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g02007 - - vun:114193127 771.541