Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g02001 ATGGCAGAACATTGTTATGTGGAAACCGACCCAACTGGTCGCTATGGCAGGTTTGGAGATGTTCTTGGAAAAGGGGCAATGAAGACTGTGTACAAAGCAATTGATGAGGTTCTTGGAATTGAGGTAGCATGGAACCAAGTCAGACTCAATGAGGCGCTTCGCACCCCTGAAGATTTGCAGAGGCTTTACTCAGAGGTTCATCTCCTCAGTACCCTCAAGCATCAGTCCATCATAAGATTCTACACTTCTTGGATTGATGTTGATAACAGGGCCTTCAACTTTATCACAGAATTGTTCACATCAGGGTCACTTAGAGAATACAGGAAGAAATATGAGCGTGTCAGCATACAAGCTATAAAGAATTGGGCTCGCCAAATCTTGCAAGGTCTTGTTTATCTACATGGCCATGATCCACCAGTGATCCACCGGGACCTTAAATGTGATAACATATTTGTCAATGGTCATCTTGGACAAGTAAAAATTGGTGACCTGGGACTTGCTGCAATTCTTCGTGGATCCCAATCAGCACACAGTGTCATAGGTACCCCTGAGTTCATGGCACCAGAGTTATACGAGGAAGAATACAATGAACTTGCTGATGTGTACTCATTTGGCATGTGTGTGTTGGAAATGCTTACATCTGAATATCCATATAGTGAATGTTCTAATCCAGCACAGATCTACAAGAAAGTGACATCGGGAAAACTACCAATGGCGTTTTTCCGGATTGAAGACATGGAAGCACAAAGGTTTATTGGAAAATGCTTGCTACCTGCAGAAAAGAGGCCTTCGGCAAAAGAATTGTTGGTTGACCCGTTTCTTGCATCTGATGATCCATCATCAACAACGAAATTTGCAATTCAGAAGCCATTTTTAAATGCCACTGAGATGGAGAAACTGCAATTAAATGATGATCTTCCGAGGACTGGAATGAAAGTGATAGGAAAACTGAATCCTGAAGATGATACTATCTTTCTCAAAGTGCAAATTTCTGATAAGAATGGTTCTGTTAGGAATGTATTCTTTCCCTTTGATATTTTCCATGACACCCCTATTGATGTTGCAACTGAGATGGTGAAAGAGTTGGAGATTGCTGATTGGGAACCTTTTGAGATTGCAAATATGATCGATAGAGAGATATCTGCTCTACTACCTCAGAGGAGGCAAACTAGCTGTTCAGATGCCTTCCACACATTCAGTTATATAGATGATGATTGTGATGATAATGATGCACCTCATCATCATTTTCGCTCCTTCTCTTCAAGTTCATCATTCCAAGAATCAATGGCAGATTTTGTCAGTAAAGCTGAGGAAATATCAAGTGGATATTATTGGCTCCATGATGATTCGCATGATGATACCAGTTCCCGATGCTCTTCACAGGGGACATATTCCAACTTGAATTACTCTTCTGTGGATGATCATCAGGATCAGTACAATGTGCATTCTTTGAGAAAAGATAAACTTGCCATCATGAAGAGTCACAGCAAGGGCAAAAAGGTTTCCCCTGGCGAAGACTTGAGCAATTTCAACCAATGTAAACTCATGGCAGGATCACTGGTTCCTTTTACTAGTAAAAGTAAGATGATGATGAACAATCAGAGATTAACAAGGAACAGGTCATTGATTGATATAAGGAGCCAACTACTACACCGATCACTGGTTGAGGAGGTCAACAAAAGAAGGTTGTTCAAGACAGTTGGTGCTGTGGAAAATATTGGATTTCAGGCACCTTGTGATGTTACAACAAAAAGGTCACATCATGTATCTTCTGCTAGGAATGAGAACTGTTCAAGGAGGGGCAAGGGGGAAAAAAATAGGAGATGA 1827 0.4111 MAEHCYVETDPTGRYGRFGDVLGKGAMKTVYKAIDEVLGIEVAWNQVRLNEALRTPEDLQRLYSEVHLLSTLKHQSIIRFYTSWIDVDNRAFNFITELFTSGSLREYRKKYERVSIQAIKNWARQILQGLVYLHGHDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSQSAHSVIGTPEFMAPELYEEEYNELADVYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTSGKLPMAFFRIEDMEAQRFIGKCLLPAEKRPSAKELLVDPFLASDDPSSTTKFAIQKPFLNATEMEKLQLNDDLPRTGMKVIGKLNPEDDTIFLKVQISDKNGSVRNVFFPFDIFHDTPIDVATEMVKELEIADWEPFEIANMIDREISALLPQRRQTSCSDAFHTFSYIDDDCDDNDAPHHHFRSFSSSSSFQESMADFVSKAEEISSGYYWLHDDSHDDTSSRCSSQGTYSNLNYSSVDDHQDQYNVHSLRKDKLAIMKSHSKGKKVSPGEDLSNFNQCKLMAGSLVPFTSKSKMMMNNQRLTRNRSLIDIRSQLLHRSLVEEVNKRRLFKTVGAVENIGFQAPCDVTTKRSHHVSSARNENCSRRGKGEKNRR 608
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g02001 608 MobiDBLite consensus disorder prediction 586 608 - -
Viun8g02001 608 Pfam Protein kinase domain 20 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun8g02001 608 Gene3D Transferase(Phosphotransferase) domain 1 99 281 - -
Viun8g02001 608 MobiDBLite consensus disorder prediction 582 608 - -
Viun8g02001 608 SMART serkin_6 16 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun8g02001 608 SUPERFAMILY Protein kinase-like (PK-like) 17 305 IPR011009 -
Viun8g02001 608 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 6 584 - -
Viun8g02001 608 ProSiteProfiles Protein kinase domain profile. 16 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun8g02001 608 FunFam Probable serine/threonine-protein kinase WNK1 1 97 - -
Viun8g02001 608 FunFam probable serine/threonine-protein kinase WNK9 99 279 - -
Viun8g02001 608 Gene3D Phosphorylase Kinase; domain 1 1 97 - -
Viun8g02001 608 ProSitePatterns Serine/Threonine protein kinases active-site signature. 140 152 IPR008271 GO:0004672|GO:0006468
Viun8g02001 608 CDD STKc_WNK 14 274 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g02001 Viun-Chr8 30553073 30557759 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g02001 6 584 MAP Kinase Kinase Kinase AT5G58350 60.892 0.0 654
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Viun8g02001 Pkinase 1.1e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g02001 K08867 - gmx:100272203 1060.06