Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g02000 ATGGGGAATAACAGGTTTAAGTTGTCAGATATGATGCCAAATGCTTGGTTTTACAAGCTCAAAGATATGAGCAGATCAAGAAACAGAAATGGTTCTCATGTTATGAAGAGTAAAGTATCTTCACCAACAACATCTCAAAGGTCGCTGCCAAGATATTCACACTATTTCTCCACTGAGCCGATCAGAACTGGTAAGCTATACAACACTCCCATTCACACCAGAGATTTGGACATGCCATTCACTGATTCACCTACAAGATCATCCAAGAGAAGGACTAGGAGAAAAACCATTTACAAGCCTTCTCCCACTGTTGTTTCTTCCTCTTTCTTACCAACTTCCAACTATGACTCCACCGATCATTGGATCAAACCATACCAAGATCAGTCACCACCAGATTATGATGTGTCTTCAGTTGAAAGCTCTTCTGAATCGGATCTCCATGAGTACGCTTATTCTGAGTCTGAATGTGACAGTTTTTCTGTTCCTGATTTACTTAACGGAATGGCCCCTAATGGCAGCTGCAGAGTTAGCTCTTCCACTAACGACATCATCATTGACATGAACAACGACTCCTTCCTTGGGAACTCTGAAAACCAAGATGGGTTTGATGCAATTTCAGAGCTGGGTCTTCCCCCAATATTGACAAAGCCAGTGAATTTTGATGACAAGGTCATTGAAGCCACTGAGTTGAGAAGTTATGAACTGCAGTATGATCAGTCTTTCTCAATTGAAATCAACAAAGAGGAAGATAGCAGAACTCAAAGGAGGAGAAAAAGCAGTCATAGAAAGCCCTTCTCTAATTCTTCTGGCATAAGGCTTAGAATCAATTCTCCAAAACTTGCTAGCAGAAAAATTCAAACTTGTGCAAGAAGGAGTGTTTCATCAACTGCAAGCAGAGCTTCAAGGAGCACAGGTTTTCCCGATGGGTTTGCTGTTGTGAAGTCCTCATTTGATCCACAGAGTGATTTCAGGGAATCAATGGTGGAGATGATTGTGGAGAACAATATCCGAGCATCGAAAGATTTGGAGGACCTACTTGCCTGCTACCTTTCCCTCAATTCTAGTGAATACCATGATCTCATTGTTAAAGCATTTGAGCAAATTTGGTTTGACTTGGCTCAACTTAGAATGTAA 1134 0.4118 MGNNRFKLSDMMPNAWFYKLKDMSRSRNRNGSHVMKSKVSSPTTSQRSLPRYSHYFSTEPIRTGKLYNTPIHTRDLDMPFTDSPTRSSKRRTRRKTIYKPSPTVVSSSFLPTSNYDSTDHWIKPYQDQSPPDYDVSSVESSSESDLHEYAYSESECDSFSVPDLLNGMAPNGSCRVSSSTNDIIIDMNNDSFLGNSENQDGFDAISELGLPPILTKPVNFDDKVIEATELRSYELQYDQSFSIEINKEEDSRTQRRRKSSHRKPFSNSSGIRLRINSPKLASRKIQTCARRSVSSTASRASRSTGFPDGFAVVKSSFDPQSDFRESMVEMIVENNIRASKDLEDLLACYLSLNSSEYHDLIVKAFEQIWFDLAQLRM 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g02000 377 MobiDBLite consensus disorder prediction 120 145 - -
Viun8g02000 377 MobiDBLite consensus disorder prediction 33 53 - -
Viun8g02000 377 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 126 373 IPR038933 GO:0045892
Viun8g02000 377 Pfam Transcriptional repressor, ovate 316 372 IPR006458 -
Viun8g02000 377 MobiDBLite consensus disorder prediction 246 270 - -
Viun8g02000 377 MobiDBLite consensus disorder prediction 72 103 - -
Viun8g02000 377 Pfam DNA-binding domain 1 45 IPR025830 GO:0003677
Viun8g02000 377 MobiDBLite consensus disorder prediction 27 54 - -
Viun8g02000 377 ProSiteProfiles OVATE domain profile. 312 371 IPR006458 -
Viun8g02000 377 MobiDBLite consensus disorder prediction 120 149 - -
Viun8g02000 377 NCBIfam uncharacterized plant-specific domain TIGR01568 310 373 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g02000 Viun-Chr8 30550589 30552048 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Viun8g02000 Ovate 3.5e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g02000 - - gmx:100780926 618.616
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun6g01258 6 21767054 21768567 Viun8g02000 8 30550589 30552048 PCT