Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g01993 ATGCCGGAAATTGAACAGGTGGCGGCGGAAAGCACCGTCTTGTTCGGAAAATACGAGGTGGGAAGGCTCTTAGGATGCGGCGCGTTCGCGAAGGTGTACCACGCGCGTAACATCGACAAGGGGCAAAGCGTGGCAGTGAAAGTGGTAAGCAAGAAGAAACTGGCCGCAACGGGGATGACCACCAACGTGAAGCGCGAGATTACCATCATGAGCCGTCTTCACCACCCCAACATCGTGAAACTCCACGAAGTGCTGGCGACCAAGACCAAAATCTACTTCATCTTGGAATTTGCGAAAGGAGGCGAGCTCTTCTCGAGGATCGCGAAAAGTCGATTCAGCGAAGATCTCGCGCGACGGTTCTTCCAGCAGTTGATCTCCGCCGTCGGGTACTGCCACGCGCGCGGCGTTTTCCACCGCGACTTGAAGCCGGAGAATCTACTGCTGGACGAGCAGGGAAACCTCAAAGTCTCCGACTTCGGACTCGGCGCGGTGAAGGAGCAGCTGGCGGTGGATGGGGTGCTGCACACGCTATGTGGGACCCCTGCTTACGTGGCACCGGAGATTTTGGCGAAGAAGGGTTACGATGGGGCCAAAGTTGATGTTTGGTCTTCCGGGGTTATTCTCTTTGTTCTTGTGGCCGGGTATCTACCGTTCAATGACCCGAATCTTATGGTGATGTACAGGAAGATTTACAAGGGGGAGTACCGGTGTCCGAGGTGGTTTTCGACGGAGTTAAGGAGGTTTCTGGCGAGGTTGTTGGATACGAATCCCGAGACGAGGATCTCTGTGGATGAGATTTTGAAGGACGCGTGGTTCAAAAAGGGGTACAAGGAGGTTACTTTTGGCGATTTGGGTTTGGAATGGAAGAGTGAAGGGGATGGGGTGAAAGATTTGAACGCGTTTGATATAATTTCTTTCTCCACAGGCTTGAATCTCTCTGGTTTGTTTGATTCGTTGAAGGAGGTGGAAGAGGGAGAGAGGTTTATACTGAAGGAGTCGCCGGAGAAGGTGGTGGAGAAGTTAGTTGCGGCGGCGGCTACTGTGGAGGGTATTATCGTGCGGAGAAGGAAGGAGTGTGGGGTGGAGTTGGAGGGGTGTAATGGTAATTTCGCCGCTTTAGTGGAGGTTTACCGGTTATCACCGGAACTGGTTGTGGTTGAGGTGAGAAGGAGGGATGGGAATGGCGGAGTTTTTAGGGATGTGTGGAGCAATAAGCTTAGGCCGTATCTCTGTGCAGCGAGTAGCAGTACGACGTCGGATCGGGAGGAAACCGGTGCGCAGCCGGTTGCCGGTGAATCATGA 1302 0.5353 MPEIEQVAAESTVLFGKYEVGRLLGCGAFAKVYHARNIDKGQSVAVKVVSKKKLAATGMTTNVKREITIMSRLHHPNIVKLHEVLATKTKIYFILEFAKGGELFSRIAKSRFSEDLARRFFQQLISAVGYCHARGVFHRDLKPENLLLDEQGNLKVSDFGLGAVKEQLAVDGVLHTLCGTPAYVAPEILAKKGYDGAKVDVWSSGVILFVLVAGYLPFNDPNLMVMYRKIYKGEYRCPRWFSTELRRFLARLLDTNPETRISVDEILKDAWFKKGYKEVTFGDLGLEWKSEGDGVKDLNAFDIISFSTGLNLSGLFDSLKEVEEGERFILKESPEKVVEKLVAAAATVEGIIVRRRKECGVELEGCNGNFAALVEVYRLSPELVVVEVRRRDGNGGVFRDVWSNKLRPYLCAASSSTTSDREETGAQPVAGES 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g01993 433 ProSiteProfiles NAF domain profile. 293 317 IPR018451 GO:0007165
Viun8g01993 433 Gene3D Transferase(Phosphotransferase) domain 1 8 293 - -
Viun8g01993 433 FunFam Non-specific serine/threonine protein kinase 9 97 - -
Viun8g01993 433 SUPERFAMILY Protein kinase-like (PK-like) 14 279 IPR011009 -
Viun8g01993 433 ProSiteProfiles Protein kinase domain profile. 18 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun8g01993 433 FunFam Non-specific serine/threonine protein kinase 8 301 - -
Viun8g01993 433 CDD CIPK_C 299 411 - -
Viun8g01993 433 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 12 391 - -
Viun8g01993 433 ProSitePatterns Protein kinases ATP-binding region signature. 24 47 IPR017441 GO:0005524
Viun8g01993 433 Gene3D Kinase associated domain 1, KA1 294 413 - -
Viun8g01993 433 ProSitePatterns Serine/Threonine protein kinases active-site signature. 136 148 IPR008271 GO:0004672|GO:0006468
Viun8g01993 433 Pfam Protein kinase domain 18 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun8g01993 433 Pfam NAF domain 297 347 IPR004041 GO:0007165
Viun8g01993 433 SMART serkin_6 18 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g01993 Viun-Chr8 30485639 30487758 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g01993 1 419 CBL-interacting serine-threonine protein kinases AT2G30360 61.060 0.0 525
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Viun8g01993 Pkinase 8.9e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g01993 - - gmx:100815088 734.947