Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g01980 ATGAATTTTCATCTTCAATCTCTTCTTCTGCTTACTTTGGTGGCAACATTTATCATCCCTACTTTTGCTCAGTTAAGTCCCGATTATTATGACCATGTTTGCCCTCAAGCATTACCAATCATATACTCAGTTGTTAAGCAGGCAATTCTTCATGAAAAACGCATGGGAGCATCCTTGCTGCGTTTGCATTTCCATGACTGCTTTGTTAATGGCTGTGATGGATCAGTGTTGCTAGACGACACACCTTTGTTCTTGGGGGAGAAGACTGCATTTGCAAATCTGAATTCAATCAGAGGATTCGAGGTGGTTGATGAAATCAAAGCAGCAGTTGATAAGGCTTGCAAACGTCCTGTAGTATCATGCGCAGATATCTTGGCTGTAGCAGCTCGTGACTCTGTAGCCATATTGGGTGGTCCACAATATTGGTACCAAGTGTTACTAGGCAGAAGAGATGCAAGAAAAGCAAGCAGGGATGCTGCAAATGCCAATCTTCCTCCTCCATTTTTCAACTTTCAACAGCTTCTTGATAATTTCCAAACTCATGGACTGAACCTCAAGGATTTGGTGGTTCTTTCTGGTGGCCATAGCATTGGATTTGCAAGGTGTATTAACTTCAGGAACAGGATCTTCAATGACACCAACATAGATCCCAAATTTGCAGCCACTTTGCGTGAGTCATGCCCTCGGAGAGGAGGAGACAATAACTTAGCACCATTTGATGCCACTCCTTCAAAATTTGACACCACATACTATAACGCTTTGTTGTACAAAAAGGGTCTTCTCCATTCTGATCAAGAGCTATTCAAAGGTGATGGTTGTGAAAGTGACAGTTTGGTGCAACTATACAGCAACGACCCTTATGCTTTTGCCAAAGATTTTGGAGTTTCCATGATTAAGATGGGTAACTTGAAGCCTCTTACAGGGTCCTACGGAGAGATCAGATACAACTGCAGAAAAGTCAATTAG 966 0.4224 MNFHLQSLLLLTLVATFIIPTFAQLSPDYYDHVCPQALPIIYSVVKQAILHEKRMGASLLRLHFHDCFVNGCDGSVLLDDTPLFLGEKTAFANLNSIRGFEVVDEIKAAVDKACKRPVVSCADILAVAARDSVAILGGPQYWYQVLLGRRDARKASRDAANANLPPPFFNFQQLLDNFQTHGLNLKDLVVLSGGHSIGFARCINFRNRIFNDTNIDPKFAATLRESCPRRGGDNNLAPFDATPSKFDTTYYNALLYKKGLLHSDQELFKGDGCESDSLVQLYSNDPYAFAKDFGVSMIKMGNLKPLTGSYGEIRYNCRKVN 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g01980 321 PRINTS Haem peroxidase superfamily signature 187 202 IPR002016 GO:0004601|GO:0006979|GO:0020037
Viun8g01980 321 PRINTS Haem peroxidase superfamily signature 239 254 IPR002016 GO:0004601|GO:0006979|GO:0020037
Viun8g01980 321 PRINTS Haem peroxidase superfamily signature 119 136 IPR002016 GO:0004601|GO:0006979|GO:0020037
Viun8g01980 321 PRINTS Haem peroxidase superfamily signature 56 70 IPR002016 GO:0004601|GO:0006979|GO:0020037
Viun8g01980 321 PRINTS Haem peroxidase superfamily signature 139 151 IPR002016 GO:0004601|GO:0006979|GO:0020037
Viun8g01980 321 ProSitePatterns Peroxidases proximal heme-ligand signature. 187 197 IPR019793 -
Viun8g01980 321 PANTHER PEROXIDASE 72-RELATED 23 320 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun8g01980 321 Pfam Peroxidase 42 284 IPR002016 GO:0004601|GO:0006979|GO:0020037
Viun8g01980 321 Gene3D - 28 321 - -
Viun8g01980 321 ProSitePatterns Peroxidases active site signature. 56 67 IPR019794 GO:0004601
Viun8g01980 321 FunFam Peroxidase 28 170 - -
Viun8g01980 321 PRINTS Plant peroxidase signature 118 128 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun8g01980 321 PRINTS Plant peroxidase signature 186 198 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun8g01980 321 PRINTS Plant peroxidase signature 58 78 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun8g01980 321 PRINTS Plant peroxidase signature 237 252 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun8g01980 321 PRINTS Plant peroxidase signature 253 270 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun8g01980 321 PRINTS Plant peroxidase signature 295 308 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun8g01980 321 PRINTS Plant peroxidase signature 98 111 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun8g01980 321 PRINTS Plant peroxidase signature 34 53 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun8g01980 321 SUPERFAMILY Heme-dependent peroxidases 24 321 IPR010255 GO:0004601|GO:0006979|GO:0020037
Viun8g01980 321 Gene3D Peroxidase, domain 2 165 300 - -
Viun8g01980 321 ProSiteProfiles Plant heme peroxidase family profile. 24 321 IPR002016 GO:0004601|GO:0006979|GO:0020037
Viun8g01980 321 FunFam Peroxidase 165 300 - -
Viun8g01980 321 CDD secretory_peroxidase 24 320 IPR033905 GO:0004601|GO:0042744
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g01980 Viun-Chr8 30356162 30358228 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g01980 23 321 Peroxidase AT5G05340 55.298 3.27e-117 339
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g01980 K00430 - gmx:100810852 511.531