Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g01971 ATGCCTTCAACAGCTTTTCAATGGCTGAGTCTTGTGGGCATCATTTGGCTCCAATCCATAACTGGAACAAACACCAATTTCCCTGCTTACTCATCACAGCTGAAACAGCTTCTTTCCATTTCCCAGTTTCAGCTCAATAACCTTGCTTTTGCCTCTGATGCTGGCAAACTGTTTGGTTTTTTGTCTGGCCTTGCTGCTGTTTACTTACCCCTTTGGCTTGTTCTCATGATTGGTTCAACTCTTGGGTTGATTGGCTATGGTGTACAATTTCTCTTCATCACAAACCATATCTCCTCTCTCTCCTACTGGCATGTCTTCTTTCTTACTGTTTTAGCAGGAAACAGCATTTGTTGGATTAACACTGTCTGCTATGTCATCACCATAAGGAACTTCCCATCTGATCGCCAAGTTGCTGTGGGGATAACAACTAGTTACCAAGGGTTAAGTGCTAAGGTTTACACCACCATTGTTGATGTTGCTGGACACAAAAAAAGGGCCATAACCTTTCTCTTTCTAAACTCAGTTTTACCTCTGCTAGTTAGCCTAATAGCAACTCCTGTGGTTAGAGAAATTGAAGTCTTAAGTCCTAAACAAAGTAGGGTTGGATTTGATGTTATCTTTGCTATAACAATCGCCACTGGAATCTACGCTGTGATGAGCAGTTTGGAGTTTGTCTCAAACAAAATATCTCCACTGGGGAGCCTTATTGGTATTCTACTGTCCCTTCTCATGCCTCTGTTACTTCCACTTTCCATGATGATCGTGGGGTCATGGCACAAAAATACAGAAAAACAAAGAGTCTACAATTTTGCTACTGAGGATGAGGTGAATGAGGTGAAGGAGGGTGAAGAAAGCGAAGAAATTCATGATGTAGGTGTAAGAGAAGAAATAGGAGCAAAATTAATGCTGAGAAGACTAGATTTCTGGTTATACTTCTTGGTGTATTTGTTCGGTGCAACACTGGGTTTGGTGTTTCTGAATAACTTGGGGCAAATCGCTGAATCCCGGGGTTACTCAGGAACCTCATCGTTGGTGTCTTTGTCTTCTTCTTTTGGGTTCTTTGGACGTCTCATGCCATCTATAGTAGATTACTTTTACAGGGATAAAAAGTGTGCAATATCAAAACCAGGTTCTATGATGGCATTAATGGGTCCAATTGCTGGGGCGTTTTTCTTACTGCTGAACAAGACTCACCTTGCACTGTATGTTAGCACTGCCATAATTGGAGTGTGTACTGGTGCAATCACTTCAATTGCGGTGTCGATGACCACTGAACTCTTTGGAACCAAGAATTTCTCAGTGAACCATAATGTGGTGGTGGCCAACATTCCTGTGGGGTCCCTTTTGTTTGGATACTTGGCTGCTATTGTTTACCATAAAGGAGGGAACGAAAATGGAAAATGCATGGGCATGGAATGCTACAGGAACACTTTCATCGTATGGGGTTCCCTTTGTTTCTTTGGCACCTTCTTGGCTTGCGTTCTACATGCTAGGACTCGCAACTTTTACTCACATAAACTATAG 1524 0.4226 MPSTAFQWLSLVGIIWLQSITGTNTNFPAYSSQLKQLLSISQFQLNNLAFASDAGKLFGFLSGLAAVYLPLWLVLMIGSTLGLIGYGVQFLFITNHISSLSYWHVFFLTVLAGNSICWINTVCYVITIRNFPSDRQVAVGITTSYQGLSAKVYTTIVDVAGHKKRAITFLFLNSVLPLLVSLIATPVVREIEVLSPKQSRVGFDVIFAITIATGIYAVMSSLEFVSNKISPLGSLIGILLSLLMPLLLPLSMMIVGSWHKNTEKQRVYNFATEDEVNEVKEGEESEEIHDVGVREEIGAKLMLRRLDFWLYFLVYLFGATLGLVFLNNLGQIAESRGYSGTSSLVSLSSSFGFFGRLMPSIVDYFYRDKKCAISKPGSMMALMGPIAGAFFLLLNKTHLALYVSTAIIGVCTGAITSIAVSMTTELFGTKNFSVNHNVVVANIPVGSLLFGYLAAIVYHKGGNENGKCMGMECYRNTFIVWGSLCFFGTFLACVLHARTRNFYSHKL 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g01971 507 SUPERFAMILY MFS general substrate transporter 11 501 IPR036259 -
Viun8g01971 507 Gene3D MFS general substrate transporter like domains 7 500 IPR036259 -
Viun8g01971 507 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 8 504 - -
Viun8g01971 507 Pfam Nodulin-like 7 249 IPR010658 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g01971 Viun-Chr8 30257763 30259709 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g01971 1 506 Nodulin-like Gene Family AT2G30300 49.136 1.42e-153 446
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g01971 - - gmx:100808034 758.059
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun8g01971 8 30257763 30259709 Viun8g01971 8 30257763 30259709 ECH