Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g01969 ATGGAATCCCTTGATGCTGCGAAACTACTGCGAGCTCATGCACACGTATGGAATCATATTTTTAGCTTCATAAATTCCATGTCCCTTAAGTGTGTTGTTGAGTTAGGCATAGCAGACATCATACACAGCCATGCCCAACCCATTTCACTCTCAACCCTCATTTCTTCACTCCCAATTCACTCTTCCAAAACTCACTTCATCCCTCGCTTGATGCGAATCATGGTTCATTCTGGCTTCTTCTCTCAACACAATCACACTGAGAATGAGCAAGAAGTCACCTATGCACTCACTGATGCCTCTTTACTTCTGCTTAAGAGCAATCCAATGAGTGTGACACCTTTCTTGCAGGCCATGCTTGATCCAGTTTTAACAACTCCATGGCATCACTTTTCTAATTGGTTCAAAAATGGTAATCTTACACCCTTTGAACTGGCACATGGGAAGTTGCTTTGGGAGTATGCTGGAAGTGATCCCAGAATTAACATCTTATTCAATGATGGCATGGCAAGTGATGCTCAACTAATCACTAGGGTGGTGATTGAGAAATGCAAAGAGGTGTTCATGGGATTGGAATCATTGGTTGATGTTGGGGGAGGTACAGGAACCATGGGAAAGGCCATTGCTGAATCCTTCCCTCAGTTGGAATGCATTGTATTTGATCTTCCACATGTTGTTTCTGGCTTGCAAGAAAGTGAAAACCTTAAATATGTTGGAGGGGACATGTTTGAGGAAATTCCTCCAACTGATGCCATTTTGTTGAAGTGGATATTACATGACTGGAGCGACGAGGAGTGTGTGAAGATATTGAAGAAATGCAAGGAAGCTATATGGAAGAAAGGGAAAGAAGGGAAGGTGATAATCATAGACATGGTGATGGATAATGAAATGAAAGATGAAGAATCAGTTAAAACACAATTCTTCTTTGACATGTTGATGATGGTGTTGGTCAAGGGAAAGGAGAGAAACCAGAAGGAATGGGTTAAGTTGTTTTCTTCTGCTGGTTTCAAAAACTACGACATAACTCCCGTTTTGGGCTCAAGGTCTCTCATTCAGATCTACCCATAG 1065 0.4188 MESLDAAKLLRAHAHVWNHIFSFINSMSLKCVVELGIADIIHSHAQPISLSTLISSLPIHSSKTHFIPRLMRIMVHSGFFSQHNHTENEQEVTYALTDASLLLLKSNPMSVTPFLQAMLDPVLTTPWHHFSNWFKNGNLTPFELAHGKLLWEYAGSDPRINILFNDGMASDAQLITRVVIEKCKEVFMGLESLVDVGGGTGTMGKAIAESFPQLECIVFDLPHVVSGLQESENLKYVGGDMFEEIPPTDAILLKWILHDWSDEECVKILKKCKEAIWKKGKEGKVIIIDMVMDNEMKDEESVKTQFFFDMLMMVLVKGKERNQKEWVKLFSSAGFKNYDITPVLGSRSLIQIYP 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g01969 354 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 17 354 IPR016461 GO:0008168
Viun8g01969 354 Gene3D Vaccinia Virus protein VP39 104 354 IPR029063 -
Viun8g01969 354 Pfam O-methyltransferase domain 127 336 IPR001077 GO:0008171
Viun8g01969 354 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 108 350 IPR029063 -
Viun8g01969 354 PANTHER O-METHYLTRANSFERASE 12 337 IPR016461 GO:0008168
Viun8g01969 354 SUPERFAMILY "Winged helix" DNA-binding domain 8 108 IPR036390 -
Viun8g01969 354 Gene3D - 1 103 IPR036388 -
Viun8g01969 354 FunFam Coniferyl alcohol 9-O-methyltransferase 1 103 - -
Viun8g01969 354 PIRSF O-mtase 1 354 IPR016461 GO:0008168
Viun8g01969 354 FunFam O-methyltransferase ZRP4 105 354 - -
Viun8g01969 354 Pfam Dimerisation domain 27 75 IPR012967 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g01969 Viun-Chr8 30237100 30238999 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g01969 27 340 Monolignol Biosynthesis Gene Families AT5G54160 34.483 4.21e-57 188
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g01969 - K16040 gmx:100807238 556.599